[English] 日本語
- 3DEM data search -

-
Search query


Keywords
Database /
Q: What are the data sources of EM Navigator?
Data entries / weeks ago
Q: When the data are updated?
Author
Processing method
Display mode
Sort by
Num. of entries / page
Entry
Article
Sample
Experiment
Processing
Max number of data0 for all data
File format
  • CSV format (Comma-Separated Values, for Excel, etc.)
  • TSV format (Tab Separated Values, for Excel, etc.)
  • JSON format

Yorodumi Search

-
Search result

Showing 1 - 50 of 68 items for (author: pata & j)

EMDB-54488:
CgCdr1 in complex with ATP, ADP-VO4
Method: single particle / : Pata J, Zarkadas E, Schoehn G, Chaptal V, Falson P

EMDB-54500:
CgCdr1 in complex with ATP and ADP
Method: single particle / : Pata J, Zarkadas E, Schoehn G, Chaptal V, Falson P

PDB-9s2c:
CgCdr1 in complex with ATP, ADP-VO4
Method: single particle / : Pata J, Zarkadas E, Schoehn G, Chaptal V, Falson P

PDB-9s2h:
CgCdr1 in complex with ATP and ADP
Method: single particle / : Pata J, Zarkadas E, Schoehn G, Chaptal V, Falson P

EMDB-63852:
Cryo-EM Structure of Human ACE2 Complexed with RacCS20637 RBD
Method: single particle / : Matsumoto K, Akasaka H, Shihoya W, Nureki O

PDB-9u4o:
Cryo-EM Structure of Human ACE2 Complexed with RacCS20637 RBD
Method: single particle / : Matsumoto K, Akasaka H, Shihoya W, Nureki O

EMDB-53487:
human FAM118B trimeric filament
Method: single particle / : Baretic D, Missoury S, Patel K, Coste F, Delarue M, Suskiewicz JM, Ahel I

EMDB-53488:
human FAM118B pentameric filament
Method: single particle / : Baretic D, Missoury S, Patel K, Coste F, Delarue M, Suskiewicz JM, Ahel I

EMDB-53555:
Human FAM118B(34-334) 2 protomers
Method: single particle / : Missoury S, Coste F, Baretic D, Patel K, Delarue M, Ahel I, Suskiewicz MJ

PDB-9r0p:
human FAM118B trimeric filament
Method: single particle / : Baretic D, Missoury S, Patel K, Coste F, Delarue M, Suskiewicz JM, Ahel I

PDB-9r0s:
human FAM118B pentameric filament
Method: single particle / : Baretic D, Missoury S, Patel K, Coste F, Delarue M, Suskiewicz JM, Ahel I

PDB-9r3e:
Human FAM118B(34-334) 2 protomers
Method: single particle / : Missoury S, Coste F, Baretic D, Patel K, Delarue M, Ahel I, Suskiewicz MJ

EMDB-53335:
apPol-DNA-nucleotide complex consensus refinement
Method: single particle / : Lahiri I, Kumari A

EMDB-53374:
apPol-DNA-nucleotide complex (ternary2)
Method: single particle / : Lahiri I, Kumari A

EMDB-53376:
apPol-DNA-nucleotide complex (ternary 1)
Method: single particle / : Lahiri I, Kumari A

EMDB-53378:
apPol-DNA complex (binary 1)
Method: single particle / : Lahiri I, Kumari A

EMDB-53379:
apPol-nucleotide complex
Method: single particle / : Lahiri I, Kumari A

EMDB-53391:
apPol-DNA-nucleotide complex (ternary 3)
Method: single particle / : Lahiri I, Kumari A

PDB-9qsc:
apPol-DNA-nucleotide complex consensus refinement
Method: single particle / : Lahiri I, Kumari A

PDB-9qu8:
apPol-DNA-nucleotide complex (ternary2)
Method: single particle / : Lahiri I, Kumari A

PDB-9qua:
apPol-DNA-nucleotide complex (ternary 1)
Method: single particle / : Lahiri I, Kumari A

PDB-9quj:
apPol-DNA complex (binary 1)
Method: single particle / : Lahiri I, Kumari A

PDB-9qun:
apPol-nucleotide complex
Method: single particle / : Lahiri I, Kumari A

PDB-9qv9:
apPol-DNA-nucleotide complex (ternary 3)
Method: single particle / : Lahiri I, Kumari A

EMDB-49656:
Rabbit RB142 polyclonal Fab in complex with HIV-1 1086C NFL Env trimer
Method: single particle / : Lin RN, Torres JL, Ozorowski G, Ward AB

EMDB-17630:
ABCB1 L335C mutant (mABCB1) in the inward facing state bound to AAC
Method: single particle / : Parey K, Januliene D, Gewering T, Moeller A, Vecchis D, Striednig B, Hilbi H, Schaefer LV, Kuprov I, Bordignon E, Seeger MA

PDB-8pee:
ABCB1 L335C mutant (mABCB1) in the inward facing state bound to AAC
Method: single particle / : Parey K, Januliene D, Gewering T, Moeller A

EMDB-15687:
The ABCB1 L335C mutant (mABCB1) in the Apo state
Method: single particle / : Parey K, Januliene D, Gewering T, Moeller A

PDB-8avy:
The ABCB1 L335C mutant (mABCB1) in the Apo state
Method: single particle / : Parey K, Januliene D, Gewering T, Moeller A

EMDB-14754:
The ABCB1 L335C mutant (mABCB1) in the outward facing state
Method: single particle / : Parey K, Januliene D, Gewering T, Moeller A, Vecchis D, Striednig B, Hilbi H, Schaefer LV, Kuprov I, Bordignon E, Seeger MA

EMDB-14755:
ABCB1 L335C mutant (mABCB1) in the outward facing state bound to AAC
Method: single particle / : Parey K, Januliene D, Gewering T, Moeller A, Vecchis D, Striednig B, Hilbi H, Schaefer LV, Kuprov I, Bordignon E, Seeger MA

EMDB-14756:
ABCB1 L335C mutant (mABCB1) in the outward facing state bound to 2 molecules of AAC
Method: single particle / : Parey K, Januliene D, Gewering T, Moeller A, Vecchis D, Striednig B, Hilbi H, Schaefer LV, Kuprov I, Bordignon E, Seeger MA

EMDB-14758:
ABCB1 L971C mutant (mABCB1) in the outward facing state bound to AAC
Method: single particle / : Parey K, Januliene D, Gewering T, Moeller A, Vecchis D, Striednig B, Hilbi H, Schaefer LV, Kuprov I, Bordignon E, Seeger MA

EMDB-14759:
ABCB1 L971C mutant (mABCB1) in the inward facing state
Method: single particle / : Parey K, Januliene D, Gewering T, Zhang Q, Moeller A, Striednig B, Hilbi H, Schaefer LV, Kuprov I, Bordignon E, Seeger MA

EMDB-14760:
ABCB1 V978C mutant (mABCB1) in the outward facing state bound to AAC
Method: single particle / : Parey K, Januliene D, Gewering T, Urbatsch I, Zhang Q, Moeller A, Hilbi H, Schaefer LV, Kuprov I, Bordignon E, Seeger MA

EMDB-14761:
ABCB1 V978C mutant (mABCB1) in the inward facing state
Method: single particle / : Parey K, Januliene D, Gewering T, Moeller A, Vecchis D, Striednig B, Hilbi H, Schaefer LV, Kuprov I, Bordignon E, Seeger MA

PDB-7zk4:
The ABCB1 L335C mutant (mABCB1) in the outward facing state
Method: single particle / : Parey K, Januliene D, Gewering T, Moeller A

PDB-7zk5:
ABCB1 L335C mutant (mABCB1) in the outward facing state bound to AAC
Method: single particle / : Parey K, Januliene D, Gewering T, Moeller A

PDB-7zk6:
ABCB1 L335C mutant (mABCB1) in the outward facing state bound to 2 molecules of AAC
Method: single particle / : Parey K, Januliene D, Gewering T, Moeller A

PDB-7zk8:
ABCB1 L971C mutant (mABCB1) in the outward facing state bound to AAC
Method: single particle / : Parey K, Januliene D, Gewering T, Moeller A

PDB-7zk9:
ABCB1 L971C mutant (mABCB1) in the inward facing state
Method: single particle / : Parey K, Januliene D, Gewering T, Zhang Q, Moeller A

PDB-7zka:
ABCB1 V978C mutant (mABCB1) in the outward facing state bound to AAC
Method: single particle / : Parey K, Januliene D, Gewering T, Urbatsch I, Zhang Q, Moeller A

PDB-7zkb:
ABCB1 V978C mutant (mABCB1) in the inward facing state
Method: single particle / : Parey K, Januliene D, Gewering T, Moeller A

EMDB-15636:
Human 80S ribosome structure from pFIB-lamellae
Method: subtomogram averaging / : Berger C, Grange M

EMDB-16185:
80S human ribosome structure from PFIB lamellae of HeLa cells for assessing the extend and depth of the damage layer: 15 to 30 nm
Method: subtomogram averaging / : Berger C, Grange M

EMDB-16186:
80S human ribosome structure from PFIB lamellae of HeLa cells for assessing the extend and depth of the damage layer: above 30 nm matched control (for 15 to 30 nm)
Method: subtomogram averaging / : Berger C, Grange M

EMDB-16192:
80S human ribosome structure from PFIB lamellae of HeLa cells for assessing the extend and depth of the damage layer:30 to 45 nm
Method: subtomogram averaging / : Berger C, Grange M

EMDB-16193:
80S human ribosome structure from PFIB lamellae of HeLa cells for assessing the extend and depth of the damage layer: above 45 nm matched control (for 30 to 45 nm)
Method: subtomogram averaging / : Berger C, Grange M

EMDB-16194:
80S human ribosome structure from PFIB lamellae of HeLa cells for assessing the extend and depth of the damage layer:45 to 60 nm
Method: subtomogram averaging / : Berger C, Grange M

EMDB-16195:
80S human ribosome structure from PFIB lamellae of HeLa cells for assessing the extend and depth of the damage layer: above 60 nm matched control (for 45 to 60 nm)
Method: subtomogram averaging / : Berger C, Grange M

Pages:

+
About EMN search

-
News

-
Feb 9, 2022. New format data for meta-information of EMDB entries

New format data for meta-information of EMDB entries

  • Version 3 of the EMDB header file is now the official format.
  • The previous official version 1.9 will be removed from the archive.

Related info.:EMDB header

External links:wwPDB to switch to version 3 of the EMDB data model

-
Oct 5, 2021. Nobel Prize for mechanically activated and temperature-gated ion channels

Nobel Prize for mechanically activated and temperature-gated ion channels

  • The Nobel Prize in Physiology or Medicine 2021 was awarded jointly to David Julius and Ardem Patapoutian "for their discoveries of receptors for temperature and touch."
  • EM Navigator can help to find cryo-EM structure data by both pioneers.

External links:The Nobel Prize in Physiology or Medicine 2021 - NobelPrize.org / Structure data by Ardem Patapoutian / Structure data by David Julius

+
Aug 12, 2020. Covid-19 info

Covid-19 info

URL: https://pdbj.org/emnavi/covid19.php

New page: Covid-19 featured information page in EM Navigator.

Related info.:Covid-19 info / Mar 5, 2020. Novel coronavirus structure data

+
Mar 5, 2020. Novel coronavirus structure data

Novel coronavirus structure data

Related info.:Yorodumi Speices / Aug 12, 2020. Covid-19 info

External links:COVID-19 featured content - PDBj / Molecule of the Month (242)：Coronavirus Proteases

+
Jul 5, 2019. Downlodablable text data

Downlodablable text data

Some data of EM Navigator services can be downloaded as text file. Software such as Excel can load the data files.

PageDataFormat
EMN Searchsearch resultCSV, TSV, or JSON
EMN statisticsdata tableCSV or TSV

Related info.:EMN Search / EMN Statistics

-
EMN Search

3DEM data search

Advanced data search for EMDB and EM data in PDB widh various search and display options

Related info.:EMDB / PDB / EM Navigator / Q: What are the data sources of EM Navigator? / Yorodumi Search / Jul 5, 2019. Downlodablable text data

Read more