[English] 日本語
- 3DEM data search -

-
Search query


Keywords
Database /
Q: What are the data sources of EM Navigator?
Data entries / weeks ago
Q: When the data are updated?
Author
Processing method
Display mode
Sort by
Num. of entries / page
Entry
Article
Sample
Experiment
Processing
Max number of data0 for all data
File format
  • CSV format (Comma-Separated Values, for Excel, etc.)
  • TSV format (Tab Separated Values, for Excel, etc.)
  • JSON format

Yorodumi Search

-
Search result

Showing 1 - 50 of 3,561 items for (author: pan & j)

EMDB-57240:
Cryo-EM structure of Bacillus subtilis DnaB
Method: single particle / : Campoy RR, Guyet A, Pelliciari S, Murray H, Ilangovan A

PDB-29km:
Cryo-EM structure of Bacillus subtilis DnaB
Method: single particle / : Campoy RR, Guyet A, Pelliciari S, Murray H, Ilangovan A

EMDB-76938:
Cryo-EM structure of COL6A3-Fab complex
Method: single particle / : Medina E, Joseph JS, Gowda M, Shanehsazzadeh A, Panwar P

PDB-13bf:
Cryo-EM structure of COL6A3-Fab complex
Method: single particle / : Medina E, Joseph JS, Gowda M, Shanehsazzadeh A, Panwar P

EMDB-76947:
Cryo-EM structure of AZGP1-Fab complex
Method: single particle / : Medina E, Joseph JS, Gowda M, Shanehsazzadeh A, Panwar P

PDB-13br:
Cryo-EM structure of AZGP1-Fab complex
Method: single particle / : Medina E, Joseph JS, Gowda M, Shanehsazzadeh A, Panwar P

EMDB-76948:
CryoEM structure of IL36RA-Fab complex
Method: single particle / : Medina E, Joseph JS, Gowda M, Shanehsazzadeh A, Panwar P

PDB-13bs:
CryoEM structure of IL36RA-Fab complex
Method: single particle / : Medina E, Joseph JS, Gowda M, Shanehsazzadeh A, Panwar P

EMDB-65273:
Cryo-EM structure of drosophila TRPgamma determined in GDN, state 1
Method: single particle / : Pang P, Yao J

EMDB-65279:
Cryo-EM structure of drosophila TRPgamma determined in GDN, state 2
Method: single particle / : Pang P, Yao J

EMDB-65280:
Cryo-EM structure of drosophila TRPgamma, calcium free, state 2
Method: single particle / : Pang P, Yao J

EMDB-65281:
Cryo-EM structure of drosophila TRPgamma in complex with camphor
Method: single particle / : Pang P, Yao J

PDB-9vqq:
Cryo-EM structure of drosophila TRPgamma determined in GDN, state 1
Method: single particle / : Pang P, Yao J

PDB-9vqw:
Cryo-EM structure of drosophila TRPgamma determined in GDN, state 2
Method: single particle / : Pang P, Yao J

PDB-9vqx:
Cryo-EM structure of drosophila TRPgamma, calcium free, state 2
Method: single particle / : Pang P, Yao J

PDB-9vqy:
Cryo-EM structure of drosophila TRPgamma in complex with camphor
Method: single particle / : Pang P, Yao J

EMDB-54623:
CryoEM structure of WIV1 spike monomer in complex with neutralizing antibody VA14_26
Method: single particle / : Upadhyay A, Alguel Y, Cherepanov P

EMDB-54628:
CryoEM structure of WIV1 spike monomer in complex with neutralizing antibody V1WT_41
Method: single particle / : Upadhyay A, Alguel Y, Cherepanov P

EMDB-54633:
CryoEM structure of WIV1 spike monomer in complex with neutralizing antibody V1WT_06
Method: single particle / : Upadhyay A, Alguel Y, Cherepanov P

EMDB-69221:
Cryo-EM structure of CDK2 in complex with CRBN/DDB1 and B11
Method: single particle / : Li XZ, Jiang Y

EMDB-69482:
Cryo-EM structure of CDK2 in complex with CRBN/DDB1 and B11 local refinement (Masked on CDK2-CRBN)
Method: single particle / : Li XZ, Jiang Y

EMDB-69484:
Cryo-EM structure of CDK2 in complex with CRBN/DDB1 and B11 local refinement (Masked on CDK2-CRBN-DDB1)
Method: single particle / : Li XZ, Jiang Y

EMDB-69485:
Cryo-EM structure of CDK2 in complex with CRBN/DDB1 and B11 consensus refinement
Method: single particle / : Li XZ, Jiang Y

PDB-23sr:
Cryo-EM structure of CDK2 in complex with CRBN/DDB1 and B11
Method: single particle / : Li XZ, Jiang Y

EMDB-66101:
The cryo-electron microscopy complex structure of PCV3 VLPs and antibody 2B5
Method: single particle / : Su J, Jiang Y, Li S, Zheng Q

EMDB-66102:
Cryo-EM structure of PCV3 VLPs
Method: single particle / : Su J, Jiang Y, Li S, Zheng Q

PDB-9wmq:
The cryo-electron microscopy complex structure of PCV3 VLPs and antibody 2B5
Method: single particle / : Su J, Jiang Y, Li S, Zheng Q

PDB-9wmr:
Cryo-EM structure of PCV3 VLPs
Method: single particle / : Su J, Jiang Y, Li S, Zheng Q

EMDB-74415:
HSV-1 UL32 tripentamer
Method: single particle / : Bailey EJ, Devarkar SC, Xiong Y, Didychuk AL

EMDB-74418:
Human cytomegalovirus UL52 3-mer
Method: single particle / : Bailey EJ, Devarkar SC, Xiong Y, Didychuk AL

EMDB-74419:
Human cytomegalovirus UL52 4-mer
Method: single particle / : Bailey EJ, Devarkar SC, Xiong Y, Didychuk AL

PDB-9zly:
HSV-1 UL32 tripentamer
Method: single particle / : Bailey EJ, Devarkar SC, Xiong Y, Didychuk AL

PDB-9zm2:
Human cytomegalovirus UL52 4-mer
Method: single particle / : Bailey EJ, Devarkar SC, Xiong Y, Didychuk AL

EMDB-71404:
DnaB complex binding with ssDNA and dTDP-AlFx
Method: single particle / : Liu C, Berger JM

PDB-9p9a:
DnaB complex binding with ssDNA and dTDP-AlFx
Method: single particle / : Liu C, Berger JM

EMDB-56127:
Neuraminidase NA isolated from the H1N1 strain A/Victoria/2570/2019 propagated in eggs in complex with zanamivir
Method: single particle / : Borowska A, Kang H, Slotboom DJ, Daniels R

PDB-9tq8:
Neuraminidase NA isolated from the H1N1 strain A/Victoria/2570/2019 propagated in eggs in complex with zanamivir
Method: single particle / : Borowska A, Kang H, Slotboom DJ, Daniels R

EMDB-54642:
Cryo-EM (200kV) structure of pyruvate decarboxylase from Neoasaia chiangmaiensis
Method: single particle / : van Rooyen JM, Barker I, Fruncillo S, Pandya A, Ozkaya D, Alcasabas A

PDB-9s7j:
Cryo-EM (200kV) structure of pyruvate decarboxylase from Neoasaia chiangmaiensis
Method: single particle / : van Rooyen JM, Barker I, Fruncillo S, Pandya A, Ozkaya D, Alcasabas A

EMDB-56126:
Neuraminidase NA isolated from the H1N1 strain A/Victoria/2570/2019 propagated in eggs
Method: single particle / : Borowska A, Kang H, Slotboom DJ, Daniels R

PDB-9tq7:
Neuraminidase NA isolated from the H1N1 strain A/Victoria/2570/2019 propagated in eggs
Method: single particle / : Borowska A, Kang H, Slotboom DJ, Daniels R

EMDB-54381:
Aquifex aeolicus lumazine synthase 12-pentamer cage in complex with I-symmetry-masked riboflavin synthase
Method: single particle / : Koziej L, Azuma Y

EMDB-54382:
Aquifex aeolicus lumazine synthase 11-pentamer cage in complex with C5-symmetrized riboflavin synthase C-termini
Method: single particle / : Koziej L, Azuma Y

EMDB-54383:
Aquifex aeolicus lumazine synthase 11-pentamer cage in complex with riboflavin synthase trimer
Method: single particle / : Koziej L, Azuma Y

EMDB-54385:
Aquifex aeolicus lumazine synthase 10-pentamer cage in complex with riboflavin synthase trimer
Method: single particle / : Koziej L, Azuma Y

EMDB-54386:
Aquifex aeolicus lumazine synthase 12-pentamer cage
Method: single particle / : Koziej L, Azuma Y

EMDB-54387:
Aquifex aeolicus lumazine synthase 11-pentamer cage
Method: single particle / : Koziej L, Azuma Y

EMDB-54388:
Aquifex aeolicus lumazine synthase R29A mutant 12-pentamer cage
Method: single particle / : Koziej L, Azuma Y

EMDB-54389:
Aquifex aeolicus lumazine synthase R29A mutant 11-pentamer cage
Method: single particle / : Koziej L, Azuma Y

EMDB-54392:
Aquifex aeolicus lumazine synthase L121A mutant 12-pentamer cage
Method: single particle / : Koziej L, Azuma Y

Pages:

+
About EMN search

-
News

-
Feb 9, 2022. New format data for meta-information of EMDB entries

New format data for meta-information of EMDB entries

  • Version 3 of the EMDB header file is now the official format.
  • The previous official version 1.9 will be removed from the archive.

Related info.:EMDB header

External links:wwPDB to switch to version 3 of the EMDB data model

-
Oct 5, 2021. Nobel Prize for mechanically activated and temperature-gated ion channels

Nobel Prize for mechanically activated and temperature-gated ion channels

  • The Nobel Prize in Physiology or Medicine 2021 was awarded jointly to David Julius and Ardem Patapoutian "for their discoveries of receptors for temperature and touch."
  • EM Navigator can help to find cryo-EM structure data by both pioneers.

External links:The Nobel Prize in Physiology or Medicine 2021 - NobelPrize.org / Structure data by Ardem Patapoutian / Structure data by David Julius

+
Aug 12, 2020. Covid-19 info

Covid-19 info

URL: https://pdbj.org/emnavi/covid19.php

New page: Covid-19 featured information page in EM Navigator.

Related info.:Covid-19 info / Mar 5, 2020. Novel coronavirus structure data

+
Mar 5, 2020. Novel coronavirus structure data

Novel coronavirus structure data

Related info.:Yorodumi Speices / Aug 12, 2020. Covid-19 info

External links:COVID-19 featured content - PDBj / Molecule of the Month (242)：Coronavirus Proteases

+
Jul 5, 2019. Downlodablable text data

Downlodablable text data

Some data of EM Navigator services can be downloaded as text file. Software such as Excel can load the data files.

PageDataFormat
EMN Searchsearch resultCSV, TSV, or JSON
EMN statisticsdata tableCSV or TSV

Related info.:EMN Search / EMN Statistics

-
EMN Search

3DEM data search

Advanced data search for EMDB and EM data in PDB widh various search and display options

Related info.:EMDB / PDB / EM Navigator / Q: What are the data sources of EM Navigator? / Yorodumi Search / Jul 5, 2019. Downlodablable text data

Read more