[English] 日本語
- 3DEM data search -

-
Search query


Keywords
Database /
Q: What are the data sources of EM Navigator?
Data entries / weeks ago
Q: When the data are updated?
Author
Processing method
Display mode
Sort by
Num. of entries / page
Entry
Article
Sample
Experiment
Processing
Max number of data0 for all data
File format
  • CSV format (Comma-Separated Values, for Excel, etc.)
  • TSV format (Tab Separated Values, for Excel, etc.)
  • JSON format

Yorodumi Search

-
Search result

Showing 1 - 50 of 179 items for (author: nans & a)

EMDB-54068:
SIVtal integrase in complex with RNA stem-loop (focused refinement of the filament repeat unit)
Method: single particle / : Singer MR, Cherepanov P

EMDB-54070:
CryoEM reconstruction of integrase filament at the lumen of native HIV-1 cores (box size 47.3 nm)
Method: single particle / : Cherepanov P, Singer MR, Hope J, Zhang P

EMDB-54071:
CryoEM reconstruction of integrase filament at the lumen of native HIV-1 cores (box size 34.2 nm)
Method: single particle / : Cherepanov P, Singer MR, Hope J, Zhang P

EMDB-55409:
HIV-1 integrase filament at the luminal side of capsid lattice by subtomogram averaging.
Method: subtomogram averaging / : Cherepanov P, Chenavier F, Hope J, Nans A, Zhang P

EMDB-51611:
Structure of FLuc-XBP1u+ stalled human 60S ribosome nascent chain complex
Method: single particle / : Voisin TB, Pellowe GA, Balchin D

PDB-9gul:
Structure of FLuc-XBP1u+ stalled human 60S ribosome nascent chain complex
Method: single particle / : Voisin TB, Pellowe GA, Balchin D

EMDB-50092:
HIV-1 envelope glycoprotein (BG505 gp140 SOSIP.664) trimer in complex with three copies of ELC07 broadly neutralizing antibody.
Method: single particle / : Hope J, Alguel Y, Nans A, Cherepanov P

PDB-9f02:
HIV-1 envelope glycoprotein (BG505 gp140 SOSIP.664) trimer in complex with three copies of ELC07 broadly neutralizing antibody.
Method: single particle / : Hope J, Alguel Y, Nans A, Cherepanov P

EMDB-50020:
HIV-1 envelope glycoprotein (BG505 gp140 SOSIP.664) trimer in complex with ELC07 broadly neutralizing antibody.
Method: single particle / : Hope J, Alguel Y, Nans A, Cherepanov P

PDB-9evz:
HIV-1 envelope glycoprotein (BG505 gp140 SOSIP.664) trimer in complex with ELC07 broadly neutralizing antibody.
Method: single particle / : Hope J, Alguel Y, Nans A, Cherepanov P

PDB-8s78:
MicroED Structure of TLR2 TIR domain-induced MyD88 TIR domain higher-order assembly
Method: electron crystallography / : Li Y, Pacoste L, Xu H, Kobe B

EMDB-46946:
TRIF TIR Filament Cryo-EM Structure
Method: helical / : Manik MK, Xiao L, Wu H

EMDB-46977:
CryoEM structure of the TIR domain from human TRAM
Method: helical / : Hedger A, Pospich S, Pan M, Gu W, Ve T, Raunser S, Landsberg M, Nanson JD, Kobe B

PDB-9dk8:
TRIF TIR Filament Cryo-EM Structure
Method: helical / : Manik MK, Xiao L, Wu H

PDB-9dlg:
CryoEM structure of the TIR domain from human TRAM
Method: helical / : Hedger A, Pospich S, Pan M, Gu W, Ve T, Raunser S, Landsberg M, Nanson JD, Kobe B

PDB-9hmf:
Periplasmic scaffold of the Campylobacter jejuni flagellar motor (alpha carbon trace)
Method: single particle / : Drobnic T, Beeby M

EMDB-17415:
Campylobacter jejuni flagellar motor, pflC deletion
Method: subtomogram averaging / : Drobnic T, Alzheimer M, Svensson S, Sharma CS, Beeby M

EMDB-17416:
Campylobacter jejuni flagellar motor, pflD deletion
Method: subtomogram averaging / : Drobnic T, Henderson LD, Alzheimer M, Svensson S, Sharma CM, Beeby M

EMDB-17417:
Campylobacter jejuni flagellar motor, truncated PflA (d16-168)
Method: subtomogram averaging / : Drobnic T, Nans A, Rosenthal PB, Beeby M

EMDB-17419:
Campylobacter jejuni flagellar motor, FlgQ-mCherry fusion
Method: subtomogram averaging / : Drobnic T, Hendrixson DR, Beeby M

EMDB-19642:
Campylobacter jejuni bacterial flagellar C-ring
Method: subtomogram averaging / : Beeby M

EMDB-16723:
Wild-type Campylobacter jejuni flagellar motor, in situ
Method: single particle / : Drobnic T, Cohen EJ, Calcraft T, Singh NK, Nans A, Rosenthal PB, Beeby M

EMDB-16724:
Periplasmic scaffold of the Campylobacter jejuni flagellar motor
Method: single particle / : Drobnic T, Cohen EJ, Singh NK, Umrekar TR, Nans A, Rosenthal PB, Beeby M

EMDB-17309:
In situ cryoEM structure of Prototype Foamy Virus Env trimer
Method: single particle / : Calcraft T, Nans A, Rosenthal PB

EMDB-17311:
In situ cryoEM structure of Prototype Foamy Virus Env dimer of trimers
Method: single particle / : Calcraft T, Nans A, Rosenthal PB

EMDB-17312:
In situ cryoEM structure of the Prototype Foamy Virus capsid, icosahedral map
Method: single particle / : Calcraft T, Nans A, Rosenthal PB

EMDB-17313:
In situ cryoEM structure of the Prototype Foamy Virus capsid, pentamer localised reconstruction
Method: single particle / : Calcraft T, Nans A, Rosenthal PB

EMDB-17314:
In situ cryoEM structure of the Prototype Foamy Virus capsid, hexamer 1 localised reconstruction
Method: single particle / : Calcraft T, Nans A, Rosenthal PB

EMDB-17315:
In situ cryoEM structure of the Prototype Foamy Virus capsid, hexamer 2 localised reconstruction
Method: single particle / : Calcraft T, Nans A, Rosenthal PB

EMDB-17316:
In situ subtomogram average of Prototype Foamy Virus Env trimer
Method: subtomogram averaging / : Calcraft T, Nans A, Rosenthal PB

EMDB-17317:
In situ subtomogram average of Prototype Foamy Virus Env pentamer of trimers
Method: subtomogram averaging / : Calcraft T, Nans A, Rosenthal PB

EMDB-17318:
In situ subtomogram average of Prototype Foamy Virus Env hexamer of trimers
Method: subtomogram averaging / : Calcraft T, Nans A, Rosenthal PB

EMDB-17319:
In situ subtomogram average of the Prototype Foamy Virus capsid, wild-type Gag
Method: subtomogram averaging / : Calcraft T, Nans A, Rosenthal PB

EMDB-17320:
In situ subtomogram average of the Prototype Foamy Virus capsid, p68 Gag
Method: subtomogram averaging / : Calcraft T, Nans A, Rosenthal PB

EMDB-17321:
Cryotomogram of Prototype Foamy Virus particles, wild-type Gag
Method: electron tomography / : Calcraft T, Nans A, Rosenthal PB

EMDB-17322:
Cryotomogram of Prototype Foamy Virus particles, p68 Gag
Method: electron tomography / : Calcraft T, Nans A, Rosenthal PB

PDB-8ozh:
In situ cryoEM structure of Prototype Foamy Virus Env trimer
Method: single particle / : Calcraft T, Nans A, Rosenthal PB

PDB-8ozj:
In situ cryoEM structure of Prototype Foamy Virus Env dimer of trimers
Method: single particle / : Calcraft T, Nans A, Rosenthal PB

PDB-8ozk:
In situ cryoEM structure of the Prototype Foamy Virus capsid, icosahedral map
Method: single particle / : Calcraft T, Nans A, Rosenthal PB

PDB-8ozl:
In situ cryoEM structure of the Prototype Foamy Virus capsid, pentamer localised reconstruction
Method: single particle / : Calcraft T, Nans A, Rosenthal PB

PDB-8ozm:
In situ cryoEM structure of the Prototype Foamy Virus capsid, hexamer 1 localised reconstruction
Method: single particle / : Calcraft T, Nans A, Rosenthal PB

PDB-8ozn:
In situ cryoEM structure of the Prototype Foamy Virus capsid, hexamer 2 localised reconstruction
Method: single particle / : Calcraft T, Nans A, Rosenthal PB

PDB-8ozp:
In situ subtomogram average of Prototype Foamy Virus Env pentamer of trimers
Method: subtomogram averaging / : Calcraft T, Nans A, Rosenthal PB

PDB-8ozq:
In situ subtomogram average of Prototype Foamy Virus Env hexamer of trimers
Method: subtomogram averaging / : Calcraft T, Nans A, Rosenthal PB

EMDB-17449:
S. cerevisiae nexus-sCMGE after DNA replication initiation
Method: single particle / : Henrikus SS, Willhoft O

EMDB-17458:
S. cerevisiae ssDNA-sCMGE after DNA replication initiation
Method: single particle / : Henrikus SS, Willhoft O

EMDB-17459:
S. cerevisiae consensus-sCMGE on ssDNA after DNA replication initiation
Method: single particle / : Henrikus SS, Willhoft O

EMDB-17460:
S. cerevisiae sCMGE with N-ter Mcm10 density
Method: single particle / : Henrikus SS, Willhoft O

PDB-8p5e:
S. cerevisiae nexus-sCMGE after DNA replication initiation
Method: single particle / : Henrikus SS, Willhoft O

PDB-8p62:
S. cerevisiae ssDNA-sCMGE after DNA replication initiation
Method: single particle / : Henrikus SS, Willhoft O

Pages:

+
About EMN search

-
News

-
Feb 9, 2022. New format data for meta-information of EMDB entries

New format data for meta-information of EMDB entries

  • Version 3 of the EMDB header file is now the official format.
  • The previous official version 1.9 will be removed from the archive.

Related info.:EMDB header

External links:wwPDB to switch to version 3 of the EMDB data model

-
Oct 5, 2021. Nobel Prize for mechanically activated and temperature-gated ion channels

Nobel Prize for mechanically activated and temperature-gated ion channels

  • The Nobel Prize in Physiology or Medicine 2021 was awarded jointly to David Julius and Ardem Patapoutian "for their discoveries of receptors for temperature and touch."
  • EM Navigator can help to find cryo-EM structure data by both pioneers.

External links:The Nobel Prize in Physiology or Medicine 2021 - NobelPrize.org / Structure data by Ardem Patapoutian / Structure data by David Julius

+
Aug 12, 2020. Covid-19 info

Covid-19 info

URL: https://pdbj.org/emnavi/covid19.php

New page: Covid-19 featured information page in EM Navigator.

Related info.:Covid-19 info / Mar 5, 2020. Novel coronavirus structure data

+
Mar 5, 2020. Novel coronavirus structure data

Novel coronavirus structure data

Related info.:Yorodumi Speices / Aug 12, 2020. Covid-19 info

External links:COVID-19 featured content - PDBj / Molecule of the Month (242)：Coronavirus Proteases

+
Jul 5, 2019. Downlodablable text data

Downlodablable text data

Some data of EM Navigator services can be downloaded as text file. Software such as Excel can load the data files.

PageDataFormat
EMN Searchsearch resultCSV, TSV, or JSON
EMN statisticsdata tableCSV or TSV

Related info.:EMN Search / EMN Statistics

-
EMN Search

3DEM data search

Advanced data search for EMDB and EM data in PDB widh various search and display options

Related info.:EMDB / PDB / EM Navigator / Q: What are the data sources of EM Navigator? / Yorodumi Search / Jul 5, 2019. Downlodablable text data

Read more