[English] 日本語
- 3DEM data search -

-
Search query


Keywords
Database /
Q: What are the data sources of EM Navigator?
Data entries / weeks ago
Q: When the data are updated?
Author
Processing method
Display mode
Sort by
Num. of entries / page
Entry
Article
Sample
Experiment
Processing
Max number of data0 for all data
File format
  • CSV format (Comma-Separated Values, for Excel, etc.)
  • TSV format (Tab Separated Values, for Excel, etc.)
  • JSON format

Yorodumi Search

-
Search result

Showing 1 - 50 of 52 items for (author: mohamed & aa)

EMDB-47110:
Cryo-EM structure of a double-loaded SUMO E1-E2-SUMO1 complex.
Method: single particle / : Jia L, Nayak D, Ruben EA, Nayak A, Wasmuth EV, Olsen SK

EMDB-47127:
Cryo-EM structure of a SUMO E1-E2-SUMO1 complex.
Method: single particle / : Jia L, Nayak D, Ruben EA, Nayak A, Wasmuth EV, Olsen SK

EMDB-70881:
SPOP double donut locally refined MATH domains
Method: single particle / : Cuneo MJ

EMDB-70882:
SPOP double donut locally refined MATH domains
Method: single particle / : Cuneo MJ

EMDB-70883:
SPOP double donut locally refined MATH domains
Method: single particle / : Cuneo MJ

EMDB-71281:
SPOP 12mer Double Donut
Method: single particle / : Cuneo MJ

EMDB-71282:
SPOP 13mer Double Donut
Method: single particle / : Cuneo MJ

EMDB-71283:
SPOP 14mer Double Donut
Method: single particle / : Cuneo MJ

PDB-9out:
SPOP double donut locally refined MATH domains
Method: single particle / : Cuneo MJ

PDB-9ouu:
SPOP double donut locally refined MATH domains
Method: single particle / : Cuneo MJ

PDB-9ouw:
SPOP double donut locally refined MATH domains
Method: single particle / : Cuneo MJ

EMDB-45753:
The structural basis for RNA slicing by human Argonatue2 (Map 1)
Method: single particle / : Mohamed AA, Wang PY, Bartel DP, Vos SM

EMDB-50034:
SARS-CoV-2 M protein dimer (short form) in complex with Fab-B and CIM-834
Method: single particle / : Debski-Antoniak OJ, Hurdiss DL

EMDB-50035:
SARS-CoV-2 M protein dimer (long form) in complex with Fab-E and incubated with CIM-834
Method: single particle / : Debski-Antoniak O, Hurdiss DL

PDB-9exa:
SARS-CoV-2 M protein dimer (short form) in complex with Fab-B and CIM-834
Method: single particle / : Debski-Antoniak OJ, Hurdiss DL

EMDB-45752:
Structure of human Argonaute2-guide-target complex in a fully paired, slicing-competent conformation
Method: single particle / : Mohamed AA, Wang PY, Bartel DP, Vos SM

EMDB-47333:
CryoEM structure of the human antibodies PIV3HN-05 and PIV3HN-13 in complex with the parainfluenza virus hemagglutinin-neuraminidase protein
Method: single particle / : Mousa JJ, Miller RJ

PDB-9dzq:
CryoEM structure of the human antibodies PIV3HN-05 and PIV3HN-13 in complex with the parainfluenza virus hemagglutinin-neuraminidase protein
Method: single particle / : Mousa JJ, Miller RJ

EMDB-43097:
Simulation-driven design of prefusion stabilized SARS-CoV-2 spike S2 antigen
Method: single particle / : Zhou L, McLellan JS

EMDB-42528:
CryoEM structure of A/Perth/16/2009 H3 in complex with flu HA central stem VH1-18 antibody UCA6
Method: single particle / : Huang J, Han J, Ward AB

EMDB-42529:
CryoEM structure of A/Michigan/45/2015 H1 in complex with flu HA central stem VH1-18 antibody 09-1B12
Method: single particle / : Huang J, Han J, Ward AB

EMDB-42530:
CryoEM structure of A/Michigan/45/2015 H1 in complex with flu HA central stem VH1-18 antibody UCA6_N55T
Method: single particle / : Huang J, Han J, Ward AB

EMDB-42531:
CryoEM structure of A/Perth/16/2009 H3 in complex with polyclonal Fab from mice immunized with H3 stem nanoparticles-15 days post immunization
Method: single particle / : Huang J, Han J, Ward AB

EMDB-42532:
CryoEM structure of A/Perth/16/2009 H3 in complex with polyclonal Fab from mice immunized with H3 stem nanoparticles-28 days post immunization
Method: single particle / : Huang J, Han J, Ward AB

EMDB-42533:
CryoEM structure of A/Shanghai/1/2013 H7 in complex with polyclonal Fab from mice immunized with H7 stem nanoparticles-15 days post-immunization
Method: single particle / : Huang J, Han J, Ward AB

EMDB-42534:
CryoEM structure of A/Shanghai/1/2013 H7 in complex with polyclonal Fab from mice immunized with H7 stem nanoparticles-28 days post immunization
Method: single particle / : Huang J, Han J, Ward AB

EMDB-42535:
CryoEM structure of A/Perth/16/2009 H3
Method: single particle / : Huang J, Han J, Ward AB

EMDB-42536:
CryoEM map of A/Shanghai/1/2013 H7 HA
Method: single particle / : Huang J, Han J, Ward AB

PDB-8ut3:
CryoEM structure of A/Perth/16/2009 H3 in complex with flu HA central stem VH1-18 antibody UCA6
Method: single particle / : Huang J, Han J, Ward AB

PDB-8ut4:
CryoEM structure of A/Michigan/45/2015 H1 in complex with flu HA central stem VH1-18 antibody 09-1B12
Method: single particle / : Huang J, Han J, Ward AB

PDB-8ut5:
CryoEM structure of A/Michigan/45/2015 H1 in complex with flu HA central stem VH1-18 antibody UCA6_N55T
Method: single particle / : Huang J, Han J, Ward AB

PDB-8ut6:
CryoEM structure of A/Perth/16/2009 H3 in complex with polyclonal Fab from mice immunized with H3 stem nanoparticles-15 days post immunization
Method: single particle / : Huang J, Han J, Ward AB

PDB-8ut7:
CryoEM structure of A/Perth/16/2009 H3 in complex with polyclonal Fab from mice immunized with H3 stem nanoparticles-28 days post immunization
Method: single particle / : Huang J, Han J, Ward AB

PDB-8ut8:
CryoEM structure of A/Shanghai/1/2013 H7 in complex with polyclonal Fab from mice immunized with H7 stem nanoparticles-15 days post-immunization
Method: single particle / : Huang J, Han J, Ward AB

PDB-8ut9:
CryoEM structure of A/Shanghai/1/2013 H7 in complex with polyclonal Fab from mice immunized with H7 stem nanoparticles-28 days post immunization
Method: single particle / : Huang J, Han J, Ward AB

EMDB-27593:
The structure of S. epidermidis Cas10-Csm bound to target RNA
Method: single particle / : Paraan M, Stagg SM, Dunkle JA

EMDB-27762:
318 kDa Cas10-Csm effector complex bound to cognate target RNA
Method: single particle / : Paraan M, Stagg SM, Dunkle JA

PDB-8do6:
The structure of S. epidermidis Cas10-Csm bound to target RNA
Method: single particle / : Paraan M, Stagg SM, Dunkle JA

EMDB-14626:
Human elongator Elp456 subcomplex
Method: single particle / : Gaik M, Glatt S

EMDB-14627:
Murine Elongator Elp456 subcomplex
Method: single particle / : Gaik M, Glatt S

EMDB-12964:
Cryo-EM Structure of the DDB1-DCAF1-CUL4A-RBX1 Complex
Method: single particle / : Mohamed WI, Schenk AD

EMDB-12965:
Cryo-EM Structure of the DDB1-DCAF1-CUL4A-RBX1-CSN Complex
Method: single particle / : Mohamed WI, Schenk AD, Kempf G, Cavadini S, Thoma NH

PDB-7okq:
Cryo-EM Structure of the DDB1-DCAF1-CUL4A-RBX1 Complex
Method: single particle / : Mohamed WI, Schenk AD, Kempf G, Cavadini S, Thoma NH

EMDB-13206:
Tetrameric building block of the human GID complex.
Method: single particle / : Mohamed WI, Park SL, Rabl J, Leitner A, Boehringer D, Peter M

EMDB-13207:
Human GID complex
Method: single particle / : Mohamed WI, Park SL, Rabl J, Leitner A, Boehringer D, Peter M

EMDB-13209:
The five-subunit hGID complex.
Method: single particle / : Mohamed WI, Park SL, Rabl J, Leitner A, Boehringer D, Peter M

EMDB-13210:
Six-subunit hGID complex.
Method: single particle / : Mohamed WI, Park SL, Rabl J, Leitner A, Boehringer D, Peter M

EMDB-3313:
Cryo-EM structure of CSN-N8-CRL4A at 6.7 A resolution
Method: single particle / : Cavadini S, Fischer ES, Bunker RD, Potenza A, Lingaraju GM, Goldie KN, Mohamed WI, Faty M, Petzold G, Beckwith REJ, Tichkule R, Hassiepen U, Abdulrahman W, Pantelic RS, Matsumoto S, Sugasawa K, Stahlberg H, Thoma NH

EMDB-3314:
Rigid part of the CSN-N8-CRL4A cryo-EM structure at 6.4 A resolution
Method: single particle / : Cavadini S, Fischer ES, Bunker RD, Potenza A, Lingaraju GM, Goldie KN, Mohamed WI, Faty M, Petzold G, Beckwith REJ, Tichkule R, Hassiepen U, Abdulrahman W, Pantelic RS, Matsumoto S, Sugasawa K, Stahlberg H, Thoma NH

EMDB-3315:
Cryo-EM structure of CSN-N8-CRL4A at 8.8 A resolution
Method: single particle / : Cavadini S, Fischer ES, Bunker RD, Potenza A, Lingaraju GM, Goldie KN, Mohamed WI, Faty M, Petzold G, Beckwith REJ, Tichkule R, Hassiepen U, Abdulrahman W, Pantelic RS, Matsumoto S, Sugasawa K, Stahlberg H, Thoma NH

Pages:

+
About EMN search

-
News

-
Feb 9, 2022. New format data for meta-information of EMDB entries

New format data for meta-information of EMDB entries

  • Version 3 of the EMDB header file is now the official format.
  • The previous official version 1.9 will be removed from the archive.

Related info.:EMDB header

External links:wwPDB to switch to version 3 of the EMDB data model

-
Oct 5, 2021. Nobel Prize for mechanically activated and temperature-gated ion channels

Nobel Prize for mechanically activated and temperature-gated ion channels

  • The Nobel Prize in Physiology or Medicine 2021 was awarded jointly to David Julius and Ardem Patapoutian "for their discoveries of receptors for temperature and touch."
  • EM Navigator can help to find cryo-EM structure data by both pioneers.

External links:The Nobel Prize in Physiology or Medicine 2021 - NobelPrize.org / Structure data by Ardem Patapoutian / Structure data by David Julius

+
Aug 12, 2020. Covid-19 info

Covid-19 info

URL: https://pdbj.org/emnavi/covid19.php

New page: Covid-19 featured information page in EM Navigator.

Related info.:Covid-19 info / Mar 5, 2020. Novel coronavirus structure data

+
Mar 5, 2020. Novel coronavirus structure data

Novel coronavirus structure data

Related info.:Yorodumi Speices / Aug 12, 2020. Covid-19 info

External links:COVID-19 featured content - PDBj / Molecule of the Month (242):Coronavirus Proteases

+
Jul 5, 2019. Downlodablable text data

Downlodablable text data

Some data of EM Navigator services can be downloaded as text file. Software such as Excel can load the data files.

PageDataFormat
EMN Searchsearch resultCSV, TSV, or JSON
EMN statisticsdata tableCSV or TSV

Related info.:EMN Search / EMN Statistics

-
EMN Search

3DEM data search

Advanced data search for EMDB and EM data in PDB widh various search and display options

Related info.:EMDB / PDB / EM Navigator / Q: What are the data sources of EM Navigator? / Yorodumi Search / Jul 5, 2019. Downlodablable text data

Read more