[English] 日本語
EMN search
- 3DEM data search -

-
Search query


Keywords
Database /
Q: What are the data sources of EM Navigator?
Data entries / weeks ago
Q: When the data are updated?
Author
Processing method
Display mode
Sort by
Num. of entries / page
Entry
Article
Sample
Experiment
Processing
Max number of data0 for all data
File format
  • CSV format (Comma-Separated Values, for Excel, etc.)
  • TSV format (Tab Separated Values, for Excel, etc.)
  • JSON format

Yorodumi Search

-
Search result

Showing 1 - 50 of 371 items for (author: meyer & j)

EMDB-42527:
Pre-fusion Measles virus fusion protein complexed with Fab 77
Method: single particle / : Zyla D, Saphire EO

EMDB-42539:
Structure of the Measles virus Fusion protein in the post-fusion conformation
Method: single particle / : Zyla D, Saphire EO

EMDB-42593:
Structure of the Measles virus Fusion protein in the pre-fusion conformation
Method: single particle / : Zyla D, Saphire EO

EMDB-42595:
Structure of the Measles virus Fusion protein in the pre-fusion conformation with bound [FIP-HRC]2-PEG11
Method: single particle / : Zyla D, Saphire EO

EMDB-43827:
Fab 77-stabilized MeV F ectodomain fragment
Method: single particle / : Zyla D, Saphire EO

PDB-8ut2:
Pre-fusion Measles virus fusion protein complexed with Fab 77
Method: single particle / : Zyla D, Saphire EO

PDB-8utf:
Structure of the Measles virus Fusion protein in the post-fusion conformation
Method: single particle / : Zyla D, Saphire EO

PDB-8uup:
Structure of the Measles virus Fusion protein in the pre-fusion conformation
Method: single particle / : Zyla D, Saphire EO

PDB-8uuq:
Structure of the Measles virus Fusion protein in the pre-fusion conformation with bound [FIP-HRC]2-PEG11
Method: single particle / : Zyla D, Saphire EO

PDB-9at8:
Fab 77-stabilized MeV F ectodomain fragment
Method: single particle / : Zyla D, Saphire EO

EMDB-19845:
Outward-open structure of human dopamine transporter bound to cocaine
Method: single particle / : Nielsen JC, Salomon K, Kalenderoglou IE, Bargmeyer S, Pape T, Shahsavar A, Loland CJ

PDB-9eo4:
Outward-open structure of human dopamine transporter bound to cocaine
Method: single particle / : Nielsen JC, Salomon K, Kalenderoglou IE, Bargmeyer S, Pape T, Shahsavar A, Loland CJ

EMDB-19426:
Escherichia coli 50S subunit in complex with the antimicrobial peptide Api137
Method: single particle / : Lauer S, Nikolay R, Spahn C

EMDB-19427:
Escherichia coli 50S subunit in complex with the antimicrobial peptide Api88 - conformation I
Method: single particle / : Lauer S, Nikolay R, Spahn C

EMDB-19428:
Escherichia coli 50S subunit in complex with the antimicrobial peptide Api88 - conformation II
Method: single particle / : Lauer S, Nikolay R, Spahn C

EMDB-19429:
Escherichia coli 50S subunit in complex with the antimicrobial peptide Api88 - conformation III
Method: single particle / : Lauer S, Nikolay R, Spahn C

PDB-8rpy:
Escherichia coli 50S subunit in complex with the antimicrobial peptide Api137
Method: single particle / : Lauer S, Nikolay R, Spahn C

PDB-8rpz:
Escherichia coli 50S subunit in complex with the antimicrobial peptide Api88 - conformation I
Method: single particle / : Lauer S, Nikolay R, Spahn C

PDB-8rq0:
Escherichia coli 50S subunit in complex with the antimicrobial peptide Api88 - conformation II
Method: single particle / : Lauer S, Nikolay R, Spahn C

PDB-8rq2:
Escherichia coli 50S subunit in complex with the antimicrobial peptide Api88 - conformation III
Method: single particle / : Lauer S, Nikolay R, Spahn C

EMDB-18639:
Locally refined SARS-CoV-2 BA-2.86 Spike receptor binding domain (RBD) complexed with angiotensin converting enzyme 2 (ACE2)
Method: single particle / : Ren J, Stuart DI, Duyvesteyn HME

EMDB-18649:
Local refinement of SARS-CoV-2 BA.2.86 Spike and XBB-7 Fab
Method: single particle / : Ren J, Duyvesteyn HME, Stuart DI

EMDB-19002:
XBB-4 Fab in complex with SARS-CoV-2 BA.2.12.1 Spike Glycoprotein
Method: single particle / : Duyvesteyn HME, Ren J, Stuart DI

PDB-8qsq:
Locally refined SARS-CoV-2 BA-2.86 Spike receptor binding domain (RBD) complexed with angiotensin converting enzyme 2 (ACE2)
Method: single particle / : Ren J, Stuart DI, Duyvesteyn HME

PDB-8qtd:
Local refinement of SARS-CoV-2 BA.2.86 Spike and XBB-7 Fab
Method: single particle / : Ren J, Duyvesteyn HME, Stuart DI

PDB-8r8k:
XBB-4 Fab in complex with SARS-CoV-2 BA.2.12.1 Spike Glycoprotein
Method: single particle / : Duyvesteyn HME, Ren J, Stuart DI

EMDB-44496:
Cryo-EM co-structure of AcrB with the CU032 efflux pump inhibitor
Method: single particle / : Su CC

EMDB-44500:
Cryo-EM co-structure of AcrB with the EPM35 efflux pump inhibitor
Method: single particle / : Su CC

EMDB-44501:
Cryo-EM co-structure of AcrB with the CU232 efflux pump inhibitor
Method: single particle / : Su CC

EMDB-44506:
Cryo-EM co-structure of AcrB with CU244
Method: single particle / : Su CC

PDB-9bfh:
Cryo-EM co-structure of AcrB with the CU032 efflux pump inhibitor
Method: single particle / : Su CC

PDB-9bfm:
Cryo-EM co-structure of AcrB with the EPM35 efflux pump inhibitor
Method: single particle / : Su CC

PDB-9bfn:
Cryo-EM co-structure of AcrB with the CU232 efflux pump inhibitor
Method: single particle / : Su CC

PDB-9bft:
Cryo-EM co-structure of AcrB with CU244
Method: single particle / : Su CC

EMDB-40674:
Subtomogram average of immature PhiKZ Major Capsid Protein from tubular arrays
Method: subtomogram averaging / : Laughlin TG, Villa E

EMDB-36948:
Human gamma-secretase in complex with a substrate mimetic
Method: single particle / : Shi YG, Zhou R, Wolfe MS

PDB-8k8e:
Human gamma-secretase in complex with a substrate mimetic
Method: single particle / : Shi YG, Zhou R, Wolfe MS

EMDB-36794:
Cryo-EM structure of Na+,K+-ATPase alpha2 from Artemia salina in cation-free E2P form
Method: single particle / : Abe K, Artigas P

PDB-8k1l:
Cryo-EM structure of Na+,K+-ATPase alpha2 from Artemia salina in cation-free E2P form
Method: single particle / : Abe K, Artigas P

EMDB-16805:
Cryo-EM structure of PcrV/Fab(30-B8)
Method: single particle / : Yuan B, Simonis A, Marlovits TC

EMDB-16807:
Cryo-EM structure of PcrV/Fab(11-E5)
Method: single particle / : Yuan B, Simonis A, Marlovits TC

PDB-8cr9:
Cryo-EM structure of PcrV/Fab(30-B8)
Method: single particle / : Yuan B, Simonis A, Marlovits TC

PDB-8crb:
Cryo-EM structure of PcrV/Fab(11-E5)
Method: single particle / : Yuan B, Simonis A, Marlovits TC

EMDB-28209:
Apo rat TRPV2 in nanodiscs, state 1
Method: single particle / : Pumroy RA, Moiseenkova-Bell VY

EMDB-28210:
Apo rat TRPV2 in nanodiscs, state 2
Method: single particle / : Pumroy RA, Moiseenkova-Bell VY

EMDB-28211:
Apo rat TRPV2 in nanodiscs, state 3
Method: single particle / : Pumroy RA, Moiseenkova-Bell VY

EMDB-28212:
rat TRPV2 in nanodiscs in the presence of weak acid at pH 5
Method: single particle / : Pumroy RA, Moiseenkova-Bell VY

PDB-8ekp:
Apo rat TRPV2 in nanodiscs, state 1
Method: single particle / : Pumroy RA, Moiseenkova-Bell VY

PDB-8ekq:
Apo rat TRPV2 in nanodiscs, state 2
Method: single particle / : Pumroy RA, Moiseenkova-Bell VY

PDB-8ekr:
Apo rat TRPV2 in nanodiscs, state 3
Method: single particle / : Pumroy RA, Moiseenkova-Bell VY

Pages:

+
About EMN search

-
News

-
Feb 9, 2022. New format data for meta-information of EMDB entries

New format data for meta-information of EMDB entries

  • Version 3 of the EMDB header file is now the official format.
  • The previous official version 1.9 will be removed from the archive.

Related info.:EMDB header

External links:wwPDB to switch to version 3 of the EMDB data model

-
Oct 5, 2021. Nobel Prize for mechanically activated and temperature-gated ion channels

Nobel Prize for mechanically activated and temperature-gated ion channels

  • The Nobel Prize in Physiology or Medicine 2021 was awarded jointly to David Julius and Ardem Patapoutian "for their discoveries of receptors for temperature and touch."
  • EM Navigator can help to find cryo-EM structure data by both pioneers.

External links:The Nobel Prize in Physiology or Medicine 2021 - NobelPrize.org / Structure data by Ardem Patapoutian / Structure data by David Julius

+
Aug 12, 2020. Covid-19 info

Covid-19 info

URL: https://pdbjlvh1.pdbj.org/emnavi/covid19.php

New page: Covid-19 featured information page in EM Navigator.

Related info.:Covid-19 info / Mar 5, 2020. Novel coronavirus structure data

+
Mar 5, 2020. Novel coronavirus structure data

Novel coronavirus structure data

Related info.:Yorodumi Speices / Aug 12, 2020. Covid-19 info

External links:COVID-19 featured content - PDBj / Molecule of the Month (242)：Coronavirus Proteases

+
Jul 5, 2019. Downlodablable text data

Downlodablable text data

Some data of EM Navigator services can be downloaded as text file. Software such as Excel can load the data files.

PageDataFormat
EMN Searchsearch resultCSV, TSV, or JSON
EMN statisticsdata tableCSV or TSV

Related info.:EMN Search / EMN Statistics

-
EMN Search

3DEM data search

Advanced data search for EMDB and EM data in PDB widh various search and display options

Related info.:EMDB / PDB / EM Navigator / Q: What are the data sources of EM Navigator? / Yorodumi Search / Jul 5, 2019. Downlodablable text data

Read more