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Showing all 40 items for (author: marzi & s)

EMDB-12178:
Staphylococcus aureus 30S ribosomal subunit in presence of spermidine (body only)

EMDB-12179:
Staphylococcus aureus 30S ribosomal subunit in presence of spermidine (head only)

PDB-7bgd:
Staphylococcus aureus 30S ribosomal subunit in presence of spermidine (body only)

PDB-7bge:
Staphylococcus aureus 30S ribosomal subunit in presence of spermidine (head only)

EMDB-12090:
Staphylococcus aureus 30S ribosomal subunit in absence of spermidine with fixed helix 44

EMDB-12091:
Staphylococcus aureus 30S ribosomal subunit in absence of spermidine with reoriented helix 44

EMDB-24533:
SARS-CoV-2 spike protein bound to the S2P6 and S2M11 Fab fragments

EMDB-24347:
SARS-CoV-2 S glycoprotein in complex with S2X259 Fab

EMDB-24365:
SARS-CoV-2 S bound to S2X259 Fab (local refinement of the RBD/S2X259 variable domains)

PDB-7ra8:
SARS-CoV-2 S glycoprotein in complex with S2X259 Fab

PDB-7ral:
SARS-CoV-2 S bound to S2X259 Fab (local refinement of the RBD/S2X259 variable domains)

EMDB-24299:
SARS-CoV-2 spike in complex with the S2D106 neutralizing antibody Fab fragment (local refinement of the RBD and S2D106)

EMDB-24300:
SARS-CoV-2 spike in complex with the S2D106 neutralizing antibody Fab fragment

EMDB-24301:
SARS-CoV-2 spike glycoprotein ectodomain in complex with the S2H97 neutralizing antibody Fab fragment

PDB-7r7n:
SARS-CoV-2 spike in complex with the S2D106 neutralizing antibody Fab fragment (local refinement of the RBD and S2D106)

EMDB-12546:
Structure of the darobactin-bound E. coli BAM complex (BamABCDE)

PDB-7nri:
Structure of the darobactin-bound E. coli BAM complex (BamABCDE)

EMDB-30883:
Cryo-EM structure of Dengue virus serotype 1 strain WestPac 74 in complex with human antibody 1C19 Fab at 37 deg C (Class 1 particle)

EMDB-30884:
Cryo-EM structure of Dengue virus serotype 1 strain WestPac 74 in complex with human antibody 1C19 Fab at 37 deg C (Class 2 particle)

EMDB-30885:
Cryo-EM map of Dengue virus serotype 2 strain PVP94/07 in complex with human antibody 1C19 Fab at 37 deg C

EMDB-30886:
Cryo-EM map of Dengue virus serotype 2 strain PVP94/07 in complex with human antibody 1C19 Fab at 40 deg C

PDB-7dwt:
Cryo-EM structure of Dengue virus serotype 1 strain WestPac 74 in complex with human antibody 1C19 Fab at 37 deg C (Class 1 particle)

PDB-7dwu:
Cryo-EM structure of Dengue virus serotype 1 strain WestPac 74 in complex with human antibody 1C19 Fab at 37 deg C (Class 2 particle)

EMDB-23052:
Staphylococcus aureus 30S ribosomal subunit in presence of spermidine

PDB-7kwg:
Staphylococcus aureus 30S ribosomal subunit in presence of spermidine

EMDB-9649:
Cryo-EM structure of Immature Dengue virus serotype 3 in complex with human antibody 1H10 Fab at pH 8.0.

EMDB-9650:
Cryo-EM structure of Immature Dengue virus serotype 3 in complex with human antibody 1H10 Fab at pH 5.0 (Class I particle)

EMDB-9651:
Cryo-EM structure of Immature Dengue virus serotype 3 in complex with human antibody 1H10 Fab at pH 5.0 (Class II particle)

PDB-6idi:
Cryo-EM structure of Immature Dengue virus serotype 3 in complex with human antibody 1H10 Fab at pH 8.0.

PDB-6idk:
Cryo-EM structure of Immature Dengue virus serotype 3 in complex with human antibody 1H10 Fab at pH 5.0 (Class I particle)

PDB-6idl:
Cryo-EM structure of Immature Dengue virus serotype 3 in complex with human antibody 1H10 Fab at pH 5.0 (Class II particle)

EMDB-4050:
70S ribosome from Staphylococcus aureus

PDB-5li0:
70S ribosome from Staphylococcus aureus

EMDB-2448:
Cryo-EM structure of T. thermophilus 30S Translation Initiation complex

PDB-3j4j:
Model of full-length T. thermophilus Translation Initiation Factor 2 refined against its cryo-EM density from a 30S Initiation Complex map

EMDB-1523:
Cryo-EM structure of prokaryotic 30S Translation Initiation Complex.

EMDB-1391:
Structured mRNAs regulate translation initiation by binding to the platform of the ribosome.

PDB-2vaz:
Model of the S15-mRNA complex fitted into the cryo-EM map of the 70S entrapment complex.

EMDB-1172:
Conformational transition of initiation factor 2 from the GTP- to GDP-bound state visualized on the ribosome.

EMDB-1173:
Conformational transition of initiation factor 2 from the GTP- to GDP-bound state visualized on the ribosome.

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Feb 9, 2022. New format data for meta-information of EMDB entries

New format data for meta-information of EMDB entries

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  • The previous official version 1.9 will be removed from the archive.

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Oct 5, 2021. Nobel Prize for mechanically activated and temperature-gated ion channels

Nobel Prize for mechanically activated and temperature-gated ion channels

  • The Nobel Prize in Physiology or Medicine 2021 was awarded jointly to David Julius and Ardem Patapoutian "for their discoveries of receptors for temperature and touch."
  • EM Navigator can help to find cryo-EM structure data by both pioneers.

External links:The Nobel Prize in Physiology or Medicine 2021 - NobelPrize.org / Structure data by Ardem Patapoutian / Structure data by David Julius

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Related info.:Covid-19 info / Mar 5, 2020. Novel coronavirus structure data

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Mar 5, 2020. Novel coronavirus structure data

Novel coronavirus structure data

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External links:COVID-19 featured content - PDBj / Molecule of the Month (242):Coronavirus Proteases

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Jul 5, 2019. Downlodablable text data

Downlodablable text data

Some data of EM Navigator services can be downloaded as text file. Software such as Excel can load the data files.

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Related info.:EMDB / PDB / EM Navigator / Q: What are the data sources of EM Navigator? / Yorodumi Search / Jul 5, 2019. Downlodablable text data

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