[English] 日本語
- 3DEM data search -

-
Search query


Keywords
Database /
Q: What are the data sources of EM Navigator?
Data entries / weeks ago
Q: When the data are updated?
Author
Processing method
Display mode
Sort by
Num. of entries / page
Entry
Article
Sample
Experiment
Processing
Max number of data0 for all data
File format
  • CSV format (Comma-Separated Values, for Excel, etc.)
  • TSV format (Tab Separated Values, for Excel, etc.)
  • JSON format

Yorodumi Search

-
Search result

Showing 1 - 50 of 1,266 items for (author: lui & f)

EMDB-53150:
Structure of the YbjP lipoprotein bound to the MacAB-TolC tripartite efflux pump
Method: single particle / : Horne J, Kaplan E, Luisi BF

PDB-9qgy:
Structure of the YbjP lipoprotein bound to the MacAB-TolC tripartite efflux pump
Method: single particle / : Kaplan E, Horne J, Luisi BF

EMDB-75195:
S305I Frontotemporal Lobar Degeneration (FTLD) type I tau filament
Method: helical / : Pan HS, Merz GE, Tse E, Southworth DR

EMDB-75196:
S305I Frontotemporal Lobar Degeneration (FTLD) type II tau filament
Method: helical / : Pan HS, Merz GE, Tse E, Southworth DR

PDB-10ij:
S305I Frontotemporal Lobar Degeneration (FTLD) type I tau filament
Method: helical / : Pan HS, Merz GE, Tse E, Southworth DR

PDB-10ik:
S305I Frontotemporal Lobar Degeneration (FTLD) type II tau filament
Method: helical / : Pan HS, Merz GE, Tse E, Southworth DR

EMDB-56420:
Structure of the MAP2K MEK1 without bound nucleotide in complex with its substrate MAPK ERK2
Method: single particle / : von Velsen J, Juyoux P, Bowler MW

PDB-9tyi:
Structure of the MAP2K MEK1 without bound nucleotide in complex with its substrate MAPK ERK2
Method: single particle / : von Velsen J, Juyoux P, Bowler MW

EMDB-75514:
Structure of amplified aSyn filament by using seed amplification assay (SAA) from MSA patient CSF.
Method: helical / : Banerjee V, Wang F, Baker ML, Serysheva II, Soto C

PDB-10xu:
Structure of amplified aSyn filament by using seed amplification assay (SAA) from MSA patient CSF.
Method: helical / : Banerjee V, Wang F, Baker ML, Serysheva II, Soto C

EMDB-56418:
Structure of the MAP2K MEK1 in an inactive conformation in complex with its substrate MAPK ERK2
Method: single particle / : von Velsen J, Juyoux P, Bowler MW

EMDB-56419:
Structure of the MAP2K MEK1 in an active conformation in complex with its substrate MAPK ERK2
Method: single particle / : von Velsen J, Juyoux P, Bowler MW

PDB-9tyg:
Structure of the MAP2K MEK1 in an inactive conformation in complex with its substrate MAPK ERK2
Method: single particle / : von Velsen J, Juyoux P, Bowler MW

PDB-9tyh:
Structure of the MAP2K MEK1 in an active conformation in complex with its substrate MAPK ERK2
Method: single particle / : von Velsen J, Juyoux P, Bowler MW

EMDB-51635:
P116 from Mycoplasma pneumoniae in complex with mild growth suppressor monoclonal antibody
Method: single particle / : Vizarraga D, Marcos Silva M, Martin Romero J, Guerra P, Fita I, Pinyol J

PDB-9gvg:
P116 from Mycoplasma pneumoniae in complex with mild growth suppressor monoclonal antibody
Method: single particle / : Vizarraga D, Marcos Silva M, Martin Romero J, Guerra P, Fita I, Pinyol J

EMDB-55527:
Early Expressome Composite Map of TEC and 30S IC
Method: single particle / : Roske JJ, Paris G, Goyal A, Rodnina MV, Zenkin N, Bandyra K, Luisi BF

EMDB-55528:
Early Expressome Consensus Refinement
Method: single particle / : Roske JJ, Paris G, Goyal A, Rodnina MV, Zenkin N, Bandyra K, Luisi BF

EMDB-55529:
Early Expressome RNAP/TEC body
Method: single particle / : Roske JJ, Paris G, Goyal A, Rodnina MV, Zenkin N, Bandyra K, Luisi BF

EMDB-55530:
E. coli 30S IC containing mRNA, IF1 and IF3
Method: single particle / : Roske JJ, Paris G, Goyal A, Rodnina MV, Zenkin N, Bandyra K, Luisi BF

EMDB-55531:
E. coli 30S IC containing mRNA, initiator tRNA, IF1 and IF2
Method: single particle / : Roske JJ, Paris G, Goyal A, Rodnina MV, Zenkin N, Bandyra K, Luisi BF

EMDB-52570:
Cryo-EM structure of mouse RNF213 (WB3/WB4 + ATP)
Method: single particle / : Grabarczyk DB, Ahel J, Clausen T

EMDB-52571:
Cryo-EM structure of mouse RNF213:UBE2L3 transthiolation intermediate, chemically stabilized, and ATPgS
Method: single particle / : Grabarczyk DB, Ahel J, Clausen T

PDB-9i1i:
Cryo-EM structure of mouse RNF213 (WB3/WB4 + ATP)
Method: single particle / : Grabarczyk DB, Ahel J, Clausen T

PDB-9i1j:
Cryo-EM structure of mouse RNF213:UBE2L3 transthiolation intermediate, chemically stabilized, and ATPgS
Method: single particle / : Grabarczyk DB, Ahel J, Clausen T

EMDB-53931:
Memory engram synapse 3D molecular architecture visualized by cryoCLEM-guided cryoET
Method: electron tomography / : Frank RAW, Lovatt CA

EMDB-53068:
Cryo-EM map of P. furiosus 70S grown at 95 degrees
Method: single particle / : Matzov D, Georgeson J, Westhof E, Schwartz S, Shalev-Benami M

EMDB-53069:
Cryo-EM map of P. furiosus 70S grown at 95 degC, focused on the lsu
Method: single particle / : Matzov D, Georgeson J, Westhof E, Schwartz S, Shalev-Benami M

EMDB-53070:
Cryo-EM map of P. furiosus 70S grown at 95 degC, focused on the ssu body
Method: single particle / : Matzov D, Georgeson J, Westhof E, Schwartz S, Shalev-Benami M

EMDB-53071:
Cryo-EM map of P. furiosus 70S grown at 95 degC, focused on the ssu head
Method: single particle / : Matzov D, Georgeson J, Westhof E, Schwartz S, Shalev-Benami M

EMDB-53072:
Consensus cryo-EM map of P furiosus 70S grown at 102degC
Method: single particle / : Matzov D, Georgeson J, Westhof E, Schwartz S, Shalev-Benami M

EMDB-53073:
Cryo-EM map of P. furiosus 70S grown at 102 degC, focused on the lsu
Method: single particle / : Matzov D, Georgeson J, Westhof E, Schwartz S, Shalev-Benami M

EMDB-53074:
Cryo-EM map of P. furiosus 70S grown at 102 degC, focused on the ssu body
Method: single particle / : Matzov D, Georgeson J, Westhof E, Schwartz S, Shalev-Benami M

EMDB-53076:
Cryo-EM map of P. furiosus 70S grown at 102 degC, focused on the ssu head
Method: single particle / : Matzov D, Georgeson J, Westhof E, Schwartz S, Shalev-Benami M

EMDB-53077:
Consensus cryo-EM map of P. furiosus 70S in RsmB deleted strain
Method: single particle / : Matzov D, Georgeson J, Westhof E, Schwartz S, Shalev-Benami M

EMDB-53078:
Cryo-EM map of P. furiosus 70S in RsmB deleted strain, focused on the lsu
Method: single particle / : Matzov D, Georgeson J, Westhof E, Schwartz S, Shalev-Benami M

EMDB-53079:
Cryo-EM map of P. furiosus 70S in RsmB deleted strain, focused on the ssu body
Method: single particle / : Matzov D, Georgeson J, Westhof E, Schwartz S, Shalev-Benami M

EMDB-53080:
Cryo-EM map of P. furiosus 70S in RsmB deleted strain, focused on the ssu head
Method: single particle / : Matzov D, Georgeson J, Westhof E, Schwartz S, Shalev-Benami M

EMDB-54546:
Human carboxyhemoglobin bound to Staphylococcus aureus IsdH-N2N3 - 3IsdH(alpha2beta):Hbtet complex
Method: single particle / : Buoli Comani V, De Bei O, Gragera M, Luisi BF, Bettati S

EMDB-54563:
Human carboxyhemoglobin bound to Staphylococcus aureus IsdH-N2N3 - 2IsdH:Hbdim complex - 3DVA component 4 right tail
Method: single particle / : Buoli Comani V, De Bei O, Gragera M, Luisi BF, Bettati S

EMDB-54565:
Human carboxyhemoglobin bound to Staphylococcus aureus IsdH-N2N3 - 2IsdH:Hbdim complex - 3DVA component 0 left tail
Method: single particle / : Buoli Comani V, De Bei O, Gragera M, Luisi BF, Bettati S

EMDB-54566:
Human carboxyhemoglobin bound to Staphylococcus aureus IsdH-N2N3 - 2IsdH:Hbdim complex - 3DVA component 0 right tail
Method: single particle / : Buoli Comani V, De Bei O, Gragera M, Luisi BF, Bettati S

EMDB-54567:
Human carboxyhemoglobin bound to Staphylococcus aureus IsdH-N2N3 - 2IsdH:Hbdim complex - 3DVA component 4 left tail
Method: single particle / : Buoli Comani V, De Bei O, Gragera M, Luisi BF, Bettati S

EMDB-54585:
Human carboxyhemoglobin bound to Staphylococcus aureus IsdH-N2N3 - 3IsdH(alphabeta2):Hbtet complex
Method: single particle / : Buoli Comani V, De Bei O, Gragera M, Luisi BF, Bettati S

EMDB-54591:
Human carboxyhemoglobin bound to Staphylococcus aureus IsdH-N2N3 - 2IsdH(alpha2):Hbtet complex - 3DVA component 0 right tail
Method: single particle / : Buoli Comani V, De Bei O, Gragera M, Luisi BF, Bettati S

EMDB-54613:
Human carboxyhemoglobin bound to Staphylococcus aureus IsdH-N2N3 - 2IsdH(alpha2):Hbtet complex - 3DVA component 0 left tail
Method: single particle / : Buoli Comani V, De Bei O, Gragera M, Luisi BF, Bettati S

EMDB-54618:
Human carboxyhemoglobin bound to Staphylococcus aureus IsdH-N2N3 - 2IsdH(alpha*beta):Hbdim complex - 3DVA component 0 right tail
Method: single particle / : Buoli Comani V, De Bei O, Gragera M, Luisi BF, Bettati S

EMDB-54619:
Human carboxyhemoglobin bound to Staphylococcus aureus IsdH-N2N3 - 2IsdH(alpha*beta):Hbdim complex - 3DVA component 0 left tail
Method: single particle / : Buoli Comani V, De Bei O, Gragera M, Luisi BF, Bettati S

EMDB-54620:
Human carboxyhemoglobin bound to Staphylococcus aureus IsdH-N2N3 - 2IsdH(alpha*beta):Hbdim complex - 3DVA component 1 left tail
Method: single particle / : Buoli Comani V, De Bei O, Gragera M, Luisi BF, Bettati S

EMDB-54621:
Human carboxyhemoglobin bound to Staphylococcus aureus IsdH-N2N3 - 2IsdH(alpha*beta):Hbdim complex - 3DVA component 1 right tail
Method: single particle / : Buoli Comani V, De Bei O, Gragera M, Luisi BF, Bettati S

Pages:

+
About EMN search

-
News

-
Feb 9, 2022. New format data for meta-information of EMDB entries

New format data for meta-information of EMDB entries

  • Version 3 of the EMDB header file is now the official format.
  • The previous official version 1.9 will be removed from the archive.

Related info.:EMDB header

External links:wwPDB to switch to version 3 of the EMDB data model

-
Oct 5, 2021. Nobel Prize for mechanically activated and temperature-gated ion channels

Nobel Prize for mechanically activated and temperature-gated ion channels

  • The Nobel Prize in Physiology or Medicine 2021 was awarded jointly to David Julius and Ardem Patapoutian "for their discoveries of receptors for temperature and touch."
  • EM Navigator can help to find cryo-EM structure data by both pioneers.

External links:The Nobel Prize in Physiology or Medicine 2021 - NobelPrize.org / Structure data by Ardem Patapoutian / Structure data by David Julius

+
Aug 12, 2020. Covid-19 info

Covid-19 info

URL: https://pdbj.org/emnavi/covid19.php

New page: Covid-19 featured information page in EM Navigator.

Related info.:Covid-19 info / Mar 5, 2020. Novel coronavirus structure data

+
Mar 5, 2020. Novel coronavirus structure data

Novel coronavirus structure data

Related info.:Yorodumi Speices / Aug 12, 2020. Covid-19 info

External links:COVID-19 featured content - PDBj / Molecule of the Month (242)：Coronavirus Proteases

+
Jul 5, 2019. Downlodablable text data

Downlodablable text data

Some data of EM Navigator services can be downloaded as text file. Software such as Excel can load the data files.

PageDataFormat
EMN Searchsearch resultCSV, TSV, or JSON
EMN statisticsdata tableCSV or TSV

Related info.:EMN Search / EMN Statistics

-
EMN Search

3DEM data search

Advanced data search for EMDB and EM data in PDB widh various search and display options

Related info.:EMDB / PDB / EM Navigator / Q: What are the data sources of EM Navigator? / Yorodumi Search / Jul 5, 2019. Downlodablable text data

Read more