[English] 日本語
- 3DEM data search -

-
Search query


Keywords
Database /
Q: What are the data sources of EM Navigator?
Data entries / weeks ago
Q: When the data are updated?
Author
Processing method
Display mode
Sort by
Num. of entries / page
Entry
Article
Sample
Experiment
Processing
Max number of data0 for all data
File format
  • CSV format (Comma-Separated Values, for Excel, etc.)
  • TSV format (Tab Separated Values, for Excel, etc.)
  • JSON format

Yorodumi Search

-
Search result

Showing 1 - 50 of 186 items for (author: lu & jw)

EMDB-64215:
CryoEM structure of the T.thermophilus transcription initiation complex in the presence of ATP
Method: single particle / : Duan W, Kaushik A, Serganov A

EMDB-64216:
CryoEM structure of the T.thermophilus transcription initiation complex in the presence of Ap4A
Method: single particle / : Duan W, Serganov A

EMDB-64218:
CryoEM structure of the T.thermophilus transcription initiation complex bound to ATP-C, -1 dC in the template DNA strand
Method: single particle / : Duan W, Kaushik A, Serganov A

EMDB-64219:
CryoEM structure of the T.thermophilus transcription initiation complex in the presence of Up4A
Method: single particle / : Duan W, Kaushik A, Serganov A

EMDB-64250:
CryoEM structure of the T.thermophilus transcription initiation complex
Method: single particle / : Duan W, Kaushik A, Serganov A

EMDB-64251:
CryoEM structure of the T.thermophilus transcription initiation complex bound to Ap4A-C, -1 dA in the template DNA strand
Method: single particle / : Duan W, Kaushik A, Serganov A

EMDB-64252:
CryoEM structure of the T.thermophilus transcription initiation complex bound to Ap4A-C, -1 dC in the template DNA strand
Method: single particle / : Duan W, Kaushik A, Serganov A

EMDB-64253:
CryoEM structure of the T.thermophilus transcription initiation complex in the presence of Gp4A, -1 dA in the template DNA strand
Method: single particle / : Duan W, Kaushik A, Serganov A

EMDB-64254:
CryoEM structure of the T.thermophilus transcription initiation complex bound to Gp4A-C-U and CTP, -1 dC in the template DNA strand
Method: single particle / : Duan W, Kaushik A, Serganov A

EMDB-64255:
CryoEM structure of the T.thermophilus transcription initiation complex bound to Gp4A-C, -1 dC in the template DNA strand
Method: single particle / : Duan W, Kaushik A, Serganov A

EMDB-64266:
CryoEM structure of the T.thermophilus transcription initiation complex bound to Up4A-C and Up4A, -1 dA in the template DNA strand
Method: single particle / : Duan W, Kaushik A, Serganov A

EMDB-64267:
CryoEM structure of the T.thermophilus transcription initiation complex bound to Up4A-C and UTP, -1 dA in the template DNA strand
Method: single particle / : Duan W, Kaushik A, Serganov A

EMDB-64271:
CryoEM structure of T.thermophilus transcription initiation complex bound to Gp4A-C, -1 dA in the template DNA strand
Method: single particle / : Duan W, Kaushik A, Serganov A

EMDB-64404:
CryoEM structure of the T.thermophilus transcription initiation complex in the presence of Gp4A, -1 dC in the template DNA strand
Method: single particle / : Duan W, Kaushik A, Serganov A

EMDB-72160:
Cryo-EM structure of ternary complex Ikaros-ZF2:CC-885:CRBN:DDB1 (molecular glue degrader)
Method: single particle / : Zhu J, Pagarigan BE, Tran ET

EMDB-53467:
Composite map of proximal A-C linker of Tetrahymena centriole
Method: single particle / : Cai B, Xu JW, Luo L, Aarts E, Leitner A, Ishikawa T, Beltro P, Pilhofer M, Wieczorek M

EMDB-53471:
Composite map of proximal A-C linker of Tetrahymena centriole
Method: single particle / : Cai B, Xu JW, Luo L, Aarts E, Leitner A, Ishikawa T, Beltro P, Pilhofer M, Wieczorek M

EMDB-53975:
A-link map of Tetrahymena proximal A-C linker
Method: single particle / : Cai B, Xu JW, Luo L, Aarts E, Leitner A, Ishikawa T, Beltro P, Pilhofer M, Wieczorek M

EMDB-53977:
A-link and A-microtubule of Tetrahymena proximal A-C linker
Method: single particle / : Cai B, Xu JW, Luo L, Aarts E, Leitner A, Ishikawa T, Beltro P, Pilhofer M, Wieczorek M

EMDB-53978:
C-link of Tetrahymena proximal A-C linker
Method: single particle / : Cai B, Xu JW, Luo L, Aarts E, Leitner A, Ishikawa T, Beltro P, Pilhofer M, Wieczorek M

EMDB-53979:
A-microtubule associated with Tetrahymena proximal A-C linker
Method: single particle / : Cai B, Xu JW, Luo L, Aarts E, Leitner A, Ishikawa T, Beltro P, Pilhofer M, Wieczorek M

EMDB-53980:
A05-A09 protofilaments of A-microtubule associated with Tetrahymena proximal A-C linker
Method: single particle / : Cai B, Xu JW, Luo L, Aarts E, Leitner A, Ishikawa T, Beltro P, Pilhofer M, Wieczorek M

EMDB-53981:
A-B inner junction of Tetrahymena centriole triplet
Method: single particle / : Cai B, Xu JW, Luo L, Aarts E, Leitner A, Ishikawa T, Beltro P, Pilhofer M, Wieczorek M

EMDB-53982:
B-C inner junction of Tetrahymena centriole triplet, focusing on POC1
Method: single particle / : Cai B, Xu JW, Luo L, Aarts E, Leitner A, Ishikawa T, Beltro P, Pilhofer M, Wieczorek M

EMDB-53983:
B-C inner junction of Tetrahymena centriole triplet, focusing on WD40 domain
Method: single particle / : Cai B, Xu JW, Luo L, Aarts E, Leitner A, Ishikawa T, Beltro P, Pilhofer M, Wieczorek M

EMDB-53984:
A-link and A-microtubule of Tetrahymena transitional A-C linker
Method: single particle / : Cai B, Xu JW, Luo L, Aarts E, Leitner A, Ishikawa T, Beltro P, Pilhofer M, Wieczorek M

EMDB-53985:
C-link of Tetrahymena transitional A-C linker
Method: single particle / : Cai B, Xu JW, Luo L, Aarts E, Leitner A, Ishikawa T, Beltro P, Pilhofer M, Wieczorek M

EMDB-53986:
C-link and C-microtubule of Tetrahymena transitional A-C linker
Method: single particle / : Cai B, Xu JW, Luo L, Aarts E, Leitner A, Ishikawa T, Beltro P, Pilhofer M, Wieczorek M

EMDB-53987:
Composite map of Tetrahymena transitional A-C linker
Method: single particle / : Cai B, Xu JW, Luo L, Aarts E, Leitner A, Ishikawa T, Beltro P, Pilhofer M, Wieczorek M

EMDB-54008:
Consensus refinement of Tetrahymena transitional A-C linker
Method: single particle / : Cai B, Xu JW, Luo L, Aarts E, Leitner A, Ishikawa T, Beltro P, Pilhofer M, Wieczorek M

EMDB-54049:
Consensus refinement of Tetrahymena proximal A-C linker
Method: single particle / : Cai B, Xu JW, Luo L, Aarts E, Leitner A, Ishikawa T, Beltro P, Pilhofer M, Wieczorek M

EMDB-54239:
Cryo sub-tomogram average of A-C linker from isolated Tetrahymena centrioles (Class01)
Method: subtomogram averaging / : Cai B, Xu JW, Luo L, Aarts E, Leitner A, Ishikawa T, Beltro P, Pilhofer M, Wieczorek M

EMDB-54240:
Cryo sub-tomogram average of A-C linker from isolated Tetrahymena centrioles (Class02)
Method: subtomogram averaging / : Cai B, Xu JW, Luo L, Aarts E, Leitner A, Ishikawa T, Beltro P, Pilhofer M, Wieczorek M

EMDB-54241:
Cryo sub-tomogram average of A-C linker from FIB-milled Tetrahymena cells
Method: subtomogram averaging / : Cai B, Xu JW, Luo L, Aarts E, Leitner A, Ishikawa T, Beltro P, Pilhofer M, Wieczorek M

EMDB-54242:
Cryo-tomogram of FIB-milled Tetrahymena cell
Method: electron tomography / : Cai B, Xu JW, Luo L, Aarts E, Leitner A, Ishikawa T, Beltro P, Pilhofer M, Wieczorek M

EMDB-47268:
Ternary complex of CRBN-DDB1-PPIL4 RRM domain with FPFT-2216
Method: single particle / : Baek K, Fischer ES

EMDB-47269:
Ternary complex of CRBN-DDB1-PDE6D with FPFT-2216
Method: single particle / : Baek K, Fischer ES

EMDB-47270:
Ternary complex of CRBN-DDB1-PDE6D with FPFT-2216 local refinement
Method: single particle / : Baek K, Fischer ES

EMDB-62471:
Cryo-EM structure of PsCas9-sgRNA binary complex
Method: single particle / : Shen PP, Lu XY, Huang JW, Chen CC, Gut RT

EMDB-62479:
Cryo-EM structure of PsCas9-sgRNA-dsDNA ternary complex
Method: single particle / : Shen PP, Lu XY, Huang JW, Chen CC, Guo RT

EMDB-63976:
Cryo-EM structure of PsCas9-sgRNA-dsDNA (30 nt) ternary complex
Method: single particle / : Shen PP, Lu XY, Huang JW, Chen CC, Guo RT

EMDB-60898:
cryo-EM structure of FtsE/X and ZipA complex in filament
Method: single particle / : Zhu KF, Li JW, Luo M

EMDB-44897:
Cryo-EM structure of rhesus antibody T646-a.01 in complex with HIV-1 Env trimer Q23.17 MD39
Method: single particle / : Roark RS, Shapiro L, Kwong PD

EMDB-44890:
Rhesus Fab 42056-a.01 in complex with CAP256SU.wk34 RnS SOSIP Env
Method: single particle / : Gorman J, Kwong PD

EMDB-44891:
Rhesus Fab 40591-a.01 in complex with T250.4 RnS SOSIP Env
Method: single particle / : Gorman J, Kwong PD

EMDB-44892:
Rhesus Fab 6561-a.01 in complex with HIV-1 Ce1176.A3 RnS SOSIP Env
Method: single particle / : Gorman J, Kwong PD

EMDB-44893:
Cryo-EM structure of rhesus antibody 41328-a.01 in complex with HIV-1 Env BG505 DS-SOSIP
Method: single particle / : Roark RS, Shapiro L, Kwong PD

EMDB-44728:
Cryo-EM structure of rhesus antibody V031-a.01 in complex with HIV-1 Env BG505 DS-SOSIP
Method: single particle / : Roark RS, Shapiro L, Kwong PD

EMDB-44729:
Cryo-EM structure of rhesus antibody 6070-a.01 in complex with HIV-1 Env trimer Q23.17 MD39
Method: single particle / : Roark RS, Shapiro L, Kwong PD

EMDB-44730:
Cryo-EM structure of rhesus antibody 44715-a.01 in complex with HIV-1 Env BG505 DS-SOSIP
Method: single particle / : Roark RS, Shapiro L, Kwong PD

Pages:

+
About EMN search

-
News

-
Feb 9, 2022. New format data for meta-information of EMDB entries

New format data for meta-information of EMDB entries

  • Version 3 of the EMDB header file is now the official format.
  • The previous official version 1.9 will be removed from the archive.

Related info.:EMDB header

External links:wwPDB to switch to version 3 of the EMDB data model

-
Oct 5, 2021. Nobel Prize for mechanically activated and temperature-gated ion channels

Nobel Prize for mechanically activated and temperature-gated ion channels

  • The Nobel Prize in Physiology or Medicine 2021 was awarded jointly to David Julius and Ardem Patapoutian "for their discoveries of receptors for temperature and touch."
  • EM Navigator can help to find cryo-EM structure data by both pioneers.

External links:The Nobel Prize in Physiology or Medicine 2021 - NobelPrize.org / Structure data by Ardem Patapoutian / Structure data by David Julius

+
Aug 12, 2020. Covid-19 info

Covid-19 info

URL: https://pdbj.org/emnavi/covid19.php

New page: Covid-19 featured information page in EM Navigator.

Related info.:Covid-19 info / Mar 5, 2020. Novel coronavirus structure data

+
Mar 5, 2020. Novel coronavirus structure data

Novel coronavirus structure data

Related info.:Yorodumi Speices / Aug 12, 2020. Covid-19 info

External links:COVID-19 featured content - PDBj / Molecule of the Month (242):Coronavirus Proteases

+
Jul 5, 2019. Downlodablable text data

Downlodablable text data

Some data of EM Navigator services can be downloaded as text file. Software such as Excel can load the data files.

PageDataFormat
EMN Searchsearch resultCSV, TSV, or JSON
EMN statisticsdata tableCSV or TSV

Related info.:EMN Search / EMN Statistics

-
EMN Search

3DEM data search

Advanced data search for EMDB and EM data in PDB widh various search and display options

Related info.:EMDB / PDB / EM Navigator / Q: What are the data sources of EM Navigator? / Yorodumi Search / Jul 5, 2019. Downlodablable text data

Read more