[English] 日本語
- 3DEM data search -

-
Search query


Keywords
Database /
Q: What are the data sources of EM Navigator?
Data entries / weeks ago
Q: When the data are updated?
Author
Processing method
Display mode
Sort by
Num. of entries / page
Entry
Article
Sample
Experiment
Processing
Max number of data0 for all data
File format
  • CSV format (Comma-Separated Values, for Excel, etc.)
  • TSV format (Tab Separated Values, for Excel, etc.)
  • JSON format

Yorodumi Search

-
Search result

Showing 1 - 50 of 20,188 items for (author: lin & l)

EMDB-69516:
In-cell map of mitoribosome from T cells of middle-aged patients after restimulation by subtomogram averaging
Method: subtomogram averaging / : Zhang X, Pan B, Su L, San J

EMDB-69519:
Tomogram of mitochondria in T cell from middle-aged patients after restimulation
Method: electron tomography / : Zhang X, Sang J, Su L, Pan B

EMDB-69521:
Tomogram of mitochondria in T cell from older patients after restimulation
Method: electron tomography / : Zhang X, Sang J, Su L, Pan B

EMDB-69523:
In-cell map of mitoribosome from T cells of older patients after restimulation by subtomogram averaging
Method: subtomogram averaging / : Zhang X, Pan B, Su L, Sang J

EMDB-69526:
In-cell map of electron transport chain supercomplex from T cells of middle-aged patients after restimulation by subtomogram averaging
Method: subtomogram averaging / : Zhang X, Pan B, Su L, Sang J

EMDB-69528:
In-cell map of electron transport chain supercomplex from T cells of older patients after restimulation by subtomogram averaging
Method: subtomogram averaging / : Zhang X, Pan B, Su L, Sang J

EMDB-73703:
Trypanosoma brucei mitochondrial RNA-editing catalytic complex 2, U-insertion (RECC2), consensus map
Method: single particle / : Liu YT, Jih J, Zhou ZH, Aphasizhev R

EMDB-73704:
Trypanosoma brucei mitochondrial RNA-editing catalytic complex 2, U-insertion (RECC2), left wing focused refinement map
Method: single particle / : Liu YT, Jih J, Zhou ZH, Aphasizhev R

EMDB-73705:
Trypanosoma brucei mitochondrial RNA-editing catalytic complex 2, U-insertion (RECC2), right wing focused refinement map
Method: single particle / : Liu YT, Jih J, Zhou ZH, Aphasizhev R

EMDB-73707:
Trypanosoma brucei mitochondrial RNA-editing catalytic complex (RECC), tRNA focused refinement map
Method: single particle / : Liu YT, Jih J, Zhou ZH, Aphasizhev R

EMDB-48098:
Human FANCJ helicase bound to a fork DNA in the closed state
Method: single particle / : You Q, Li H

EMDB-48099:
Human FANCJ helicase bound to a fork DNA in the open state
Method: single particle / : You Q, Li H

PDB-9eja:
Human FANCJ helicase bound to a fork DNA in the closed state
Method: single particle / : You Q, Li H

PDB-9ejb:
Human FANCJ helicase bound to a fork DNA in the open state
Method: single particle / : You Q, Li H

EMDB-72844:
Human muscle nAChR FCCMS eP121L ACh-bound
Method: single particle / : Li H, Hibbs RE

EMDB-72845:
Human muscle nAChR FCCMS eP121L ACh, XG-590 bound
Method: single particle / : Li H, Hibbs RE

EMDB-72846:
Human muscle nAChR SCCMS eL269F ACh bound
Method: single particle / : Li H, Hibbs RE

EMDB-72850:
Human muscle nAChR SCCMS eL269F ACh, Reboxetine bound (upper)
Method: single particle / : Li H, Hibbs RE

EMDB-72851:
Human muscle nAChR SCCMS eL269F ACh, Reboxetine bound (lower 1)
Method: single particle / : Li H, Hibbs RE

EMDB-72853:
Human muscle nAChR SCCMS eL269F ACh, Reboxetine bound (lower 2)
Method: single particle / : Li H, Hibbs RE

EMDB-72854:
Human muscle nAChR SCCMS eL269F ACh, Fluoxetine bound
Method: single particle / : Li H, Hibbs RE

EMDB-72860:
Human muscle nAChR SCCMS eT264P ACh bound
Method: single particle / : Li H, Hibbs RE

EMDB-72862:
Human muscle nAChR SCCMS eT264P ACh, Reboxetine bound
Method: single particle / : Li H, Hibbs RE

EMDB-72863:
Human muscle nAChR SCCMS bV266M ACh bound
Method: single particle / : Li H, Hibbs RE

EMDB-72866:
Human muscle nAChR SCCMS bV266M ACh, Quinidine bound
Method: single particle / : Li H, Hibbs RE

EMDB-72868:
Human muscle nAChR SCCMS aV249F ACh, Fluoxetine bound
Method: single particle / : Li H, Hibbs RE

PDB-9ye6:
Human muscle nAChR FCCMS eP121L ACh-bound
Method: single particle / : Li H, Hibbs RE

PDB-9ye7:
Human muscle nAChR FCCMS eP121L ACh, XG-590 bound
Method: single particle / : Li H, Hibbs RE

PDB-9ye8:
Human muscle nAChR SCCMS eL269F ACh bound
Method: single particle / : Li H, Hibbs RE

PDB-9yeh:
Human muscle nAChR SCCMS eL269F ACh, Reboxetine bound (upper)
Method: single particle / : Li H, Hibbs RE

PDB-9yei:
Human muscle nAChR SCCMS eL269F ACh, Reboxetine bound (lower 1)
Method: single particle / : Li H, Hibbs RE

PDB-9yek:
Human muscle nAChR SCCMS eL269F ACh, Reboxetine bound (lower 2)
Method: single particle / : Li H, Hibbs RE

PDB-9yel:
Human muscle nAChR SCCMS eL269F ACh, Fluoxetine bound
Method: single particle / : Li H, Hibbs RE

PDB-9yer:
Human muscle nAChR SCCMS eT264P ACh bound
Method: single particle / : Li H, Hibbs RE

PDB-9yet:
Human muscle nAChR SCCMS eT264P ACh, Reboxetine bound
Method: single particle / : Li H, Hibbs RE

PDB-9yeu:
Human muscle nAChR SCCMS bV266M ACh bound
Method: single particle / : Li H, Hibbs RE

PDB-9yex:
Human muscle nAChR SCCMS bV266M ACh, Quinidine bound
Method: single particle / : Li H, Hibbs RE

PDB-9yf0:
Human muscle nAChR SCCMS aV249F ACh, Fluoxetine bound
Method: single particle / : Li H, Hibbs RE

EMDB-65509:
Escherichia coli transcription-translation coupled complex class B (TTC-B) that ribosome walking for 4 codons to a 9 codon mRNA spacer, and fMet-tRNAs in E-site and P-site of the ribosome
Method: single particle / : Zhang J, Wang C

PDB-9w0n:
Escherichia coli transcription-translation coupled complex class B (TTC-B) that ribosome walking for 4 codons to a 9 codon mRNA spacer, and fMet-tRNAs in E-site and P-site of the ribosome
Method: single particle / : Zhang J, Wang C

EMDB-71756:
Alternative NBD1-binding geometry in channel-formed, ATP-bound, VX809-bound, T2a-nanobody-bound wild-type human CFTR (sharpened consensus map from cryoSPARC non-uniform refinement)
Method: single particle / : Hunt JF, Paige AS, Cohen BM, Goldberg PM, Wang C, Loughlin BJ, Kappes JC, Yang Z, Jiang F, Govaerts C, Overtus M, Rich Z

EMDB-71757:
Alternative NBD1-binding geometry in channel-formed, ATP-bound, VX809-bound, T2a-nanobody-bound wild-type human CFTR (sharpened AHD1 local refinement map from cryoSPARC)
Method: single particle / : Hunt JF, Paige AS, Cohen BM, Goldberg PM, Wang C, Loughlin BJ, Kappes JC, Yang Z, Jiang F, Govaerts C, Overtus M, Rich Z

EMDB-71758:
Alternative NBD1-binding geometry in channel-formed, ATP-bound, VX809-bound, T2a-nanobody-bound wild-type human CFTR (sharpened AHD2 local refinement map from cryoSPARC)
Method: single particle / : Hunt JF, Paige AS, Cohen BM, Goldberg PM, Wang C, Loughlin BJ, Kappes JC, Yang Z, Jiang F, Govaerts C, Overtus M, Rich Z

EMDB-71759:
Alternative NBD1-binding geometry in channel-formed, ATP-bound, VX809-bound, T2a-nanobody-bound wild-type human CFTR (sharpened CORE1 local refinement map from cryoSPARC)
Method: single particle / : Hunt JF, Paige AS, Cohen BM, Goldberg PM, Wang C, Loughlin BJ, Kappes JC, Yang Z, Jiang F, Govaerts C, Overtus M, Rich Z

EMDB-71760:
Alternative NBD1-binding geometry in channel-formed, ATP-bound, VX809-bound, T2a-nanobody-bound wild-type human CFTR (sharpened CORE2 local refinement map from cryoSPARC)
Method: single particle / : Hunt JF, Paige AS, Cohen BM, Goldberg PM, Wang C, Loughlin BJ, Kappes JC, Yang Z, Jiang F, Govaerts C, Overtus M, Rich Z

EMDB-71761:
Alternative NBD1-binding geometry in channel-formed, ATP-bound, VX809-bound, T2a-nanobody-bound wild-type human CFTR (sharpened WalkerB1 local refinement map from cryoSPARC)
Method: single particle / : Hunt JF, Paige AS, Cohen BM, Goldberg PM, Wang C, Loughlin BJ, Kappes JC, Yang Z, Jiang F, Govaerts C, Overtus M, Rich Z

EMDB-71762:
Alternative NBD1-binding geometry in channel-formed, ATP-bound, VX809-bound, T2a-nanobody-bound wild-type human CFTR (sharpened WalkerB2 local refinement map from cryoSPARC)
Method: single particle / : Hunt JF, Paige AS, Cohen BM, Goldberg PM, Wang C, Loughlin BJ, Kappes JC, Yang Z, Jiang F, Govaerts C, Overtus M, Rich Z

EMDB-71763:
Alternative NBD1-binding geometry in channel-formed, ATP-bound, VX809-bound, T2a-nanobody-bound wild-type human CFTR (sharpened NBD1 plus T2a local refinement map from cryoSPARC)
Method: single particle / : Hunt JF, Paige AS, Cohen BM, Goldberg PM, Wang C, Loughlin BJ, Kappes JC, Yang Z, Jiang F, Govaerts C, Overtus M, Rich Z

EMDB-71764:
Alternative NBD1-binding geometry in channel-formed, ATP-bound, VX809-bound, T2a-nanobody-bound wild-type human CFTR (sharpened NBD2 plus T2a local refinement map from cryoSPARC)
Method: single particle / : Hunt JF, Paige AS, Cohen BM, Goldberg PM, Wang C, Loughlin BJ, Kappes JC, Yang Z, Jiang F, Govaerts C, Overtus M, Rich Z

EMDB-71765:
Alternative NBD1-binding geometry in channel-formed, ATP-bound, VX809-bound, T2a-nanobody-bound wild-type human CFTR (sharpened T2a plus T2a local refinement map from cryoSPARC)
Method: single particle / : Hunt JF, Paige AS, Cohen BM, Goldberg PM, Wang C, Loughlin BJ, Kappes JC, Yang Z, Jiang F, Govaerts C, Overtus M, Rich Z

Pages:

+
About EMN search

-
News

-
Feb 9, 2022. New format data for meta-information of EMDB entries

New format data for meta-information of EMDB entries

  • Version 3 of the EMDB header file is now the official format.
  • The previous official version 1.9 will be removed from the archive.

Related info.:EMDB header

External links:wwPDB to switch to version 3 of the EMDB data model

-
Oct 5, 2021. Nobel Prize for mechanically activated and temperature-gated ion channels

Nobel Prize for mechanically activated and temperature-gated ion channels

  • The Nobel Prize in Physiology or Medicine 2021 was awarded jointly to David Julius and Ardem Patapoutian "for their discoveries of receptors for temperature and touch."
  • EM Navigator can help to find cryo-EM structure data by both pioneers.

External links:The Nobel Prize in Physiology or Medicine 2021 - NobelPrize.org / Structure data by Ardem Patapoutian / Structure data by David Julius

+
Aug 12, 2020. Covid-19 info

Covid-19 info

URL: https://pdbj.org/emnavi/covid19.php

New page: Covid-19 featured information page in EM Navigator.

Related info.:Covid-19 info / Mar 5, 2020. Novel coronavirus structure data

+
Mar 5, 2020. Novel coronavirus structure data

Novel coronavirus structure data

Related info.:Yorodumi Speices / Aug 12, 2020. Covid-19 info

External links:COVID-19 featured content - PDBj / Molecule of the Month (242)：Coronavirus Proteases

+
Jul 5, 2019. Downlodablable text data

Downlodablable text data

Some data of EM Navigator services can be downloaded as text file. Software such as Excel can load the data files.

PageDataFormat
EMN Searchsearch resultCSV, TSV, or JSON
EMN statisticsdata tableCSV or TSV

Related info.:EMN Search / EMN Statistics

-
EMN Search

3DEM data search

Advanced data search for EMDB and EM data in PDB widh various search and display options

Related info.:EMDB / PDB / EM Navigator / Q: What are the data sources of EM Navigator? / Yorodumi Search / Jul 5, 2019. Downlodablable text data

Read more