[English] 日本語
- 3DEM data search -

-
Search query


Keywords
Database /
Q: What are the data sources of EM Navigator?
Data entries / weeks ago
Q: When the data are updated?
Author
Processing method
Display mode
Sort by
Num. of entries / page
Entry
Article
Sample
Experiment
Processing
Max number of data0 for all data
File format
  • CSV format (Comma-Separated Values, for Excel, etc.)
  • TSV format (Tab Separated Values, for Excel, etc.)
  • JSON format

Yorodumi Search

-
Search result

Showing 1 - 50 of 243 items for (author: lee & dj)

EMDB-72377:
Staphylococcal Enterotoxin C in complex with NB C107 and NB C112
Method: single particle / : Hang W, Kim J, Taylor DJ, Shi Y

EMDB-49511:
CH35 V1V2V3 and gp41-base macaque polyclonal Fabs in complex with Q23-APEX-GT2 trimer
Method: single particle / : Lee WH, Ozorowski G, Ward AB

EMDB-49512:
CH35 gp41-FP macaque polyclonal Fab in complex with Q23-APEX-GT2 trimer
Method: single particle / : Lee WH, Ozorowski G, Ward AB

EMDB-49513:
CH70 gp41-GH macaque polyclonal Fab in complex with Q23-APEX-GT2 trimer
Method: single particle / : Lee WH, Ozorowski G, Ward AB

EMDB-49865:
Cryo-EM structure of V2 apex germline-targeting HIV Env trimer Q23-APEX-GT2
Method: single particle / : Roark RS, Shapiro LS, Kwong PD

EMDB-49866:
Cryo-EM structure of rhesus antibody CH35-Apex1.08 in complex with HIV Env trimer Q23-APEX-GT2
Method: single particle / : Roark RS, Shapiro LS, Kwong PD

EMDB-49867:
Cryo-EM structure of rhesus antibody CI91-Apex1.01 in complex with HIV Env trimer Q23-APEX-GT2
Method: single particle / : Roark RS, Shapiro LS, Kwong PD

EMDB-49868:
Cryo-EM structure of rhesus antibody CH70-Apex2.01 in complex with HIV Env trimer Q23-APEX-GT2
Method: single particle / : Roark RS, Shapiro LS, Kwong PD

EMDB-49869:
Cryo-EM structure of rhesus antibody CH70-Apex1.01 in complex with HIV Env trimer Q23-APEX-GT2
Method: single particle / : Roark RS, Shapiro LS, Kwong PD

EMDB-49870:
Cryo-EM structure of rhesus antibody CH42-Apex1.01 in complex with HIV Env trimer Q23-APEX-GT2
Method: single particle / : Roark RS, Shapiro LS, Kwong PD

EMDB-49871:
Cryo-EM structure of rhesus antibody CH42-Apex2.01 in complex with HIV Env trimer Q23-APEX-GT2
Method: single particle / : Roark RS, Shapiro LS, Kwong PD

EMDB-72735:
HIV-1 Env Q23 NFL TD CC3+ in complex with NHP Q9 V2-apex polyclonal antibody Fabs isolated post-2 immunizations
Method: single particle / : Lee WH, Ozorowski G, Ward AB

EMDB-72736:
HIV-1 Env Q23 NFL TD CC3+ in complex with NHP Q10 V2-apex polyclonal antibody Fabs isolated post-2 immunizations
Method: single particle / : Lee WH, Ozorowski G, Ward AB

EMDB-72737:
HIV-1 Env Q23 NFL TD CC3+ in complex with NHP Q12 V2-apex polyclonal antibody Fabs isolated post-2 immunizations
Method: single particle / : Lee WH, Ozorowski G, Ward AB

EMDB-72738:
HIV-1 Env 16055 NFL TD CC2+ in complex with pooled NHP Q8-Q9-Q12 V2-apex polyclonal antibody Fabs isolated post-4 immunizations
Method: single particle / : Lee WH, Ozorowski G, Ward AB

EMDB-72739:
HIV-1 Env BG505 NFL TD CC3+ in complex with pooled NHP Q8-Q9-Q12 V2-apex polyclonal antibody Fabs isolated post-4 immunizations
Method: single particle / : Lee WH, Ozorowski G, Ward AB

EMDB-44474:
HIV-1 Env 16055 dGly4 NFL
Method: single particle / : Ozorowski G, Lee WH, Ward AB

EMDB-70838:
Rabbit 37496 base and V1/V3 epitope polyclonal Fabs in complex with BG505 MD39.3 SOSIP
Method: single particle / : Ozorowski G, Torres JL, Jackson AM, Ward AB

EMDB-70839:
Rabbit 37496 base and gp41-GH epitope polyclonal Fabs in complex with BG505 MD39.3 SOSIP
Method: single particle / : Ozorowski G, Torres JL, Jackson AM, Ward AB

EMDB-70840:
Rabbit 37496 base and gp120-GH epitope polyclonal Fabs in complex with BG505 MD39.3 SOSIP
Method: single particle / : Ozorowski G, Torres JL, Jackson AM, Ward AB

EMDB-70846:
Rabbit 37496 base and C3V5 epitope polyclonal Fabs in complex with BG505 MD39.3 SOSIP
Method: single particle / : Ozorowski G, Torres JL, Jackson AM, Ward AB

EMDB-70847:
Rabbit 37450 base, gp41-FP and gp120int epitope polyclonal Fabs in complex with BG505 MD39.3 SOSIP
Method: single particle / : Ozorowski G, Torres JL, Jackson AM, Ward AB

EMDB-70848:
Rabbit 37442 base and gp120int epitope polyclonal Fabs in complex with BG505 MD39.3 SOSIP
Method: single particle / : Ozorowski G, Torres JL, Jackson AM, Ward AB

EMDB-70852:
NHP RJh18 base epitope polyclonal Fabs in complex with BG505 MD39.3 SOSIP
Method: single particle / : Ozorowski G, Torres JL, Jackson AM, Ward AB

EMDB-70855:
NHP RUv18 base epitope polyclonal Fabs in complex with BG505 MD39.3 SOSIP
Method: single particle / : Ozorowski G, Torres JL, Jackson AM, Ward AB

EMDB-70858:
NHP RUv18 V1/V3 epitope polyclonal Fabs in complex with BG505 MD39.3 SOSIP
Method: single particle / : Ozorowski G, Torres JL, Jackson AM, Ward AB

EMDB-70860:
NHP REy18 base and V1/V3 epitope polyclonal Fabs in complex with BG505 MD39.3 SOSIP
Method: single particle / : Ozorowski G, Torres JL, Jackson AM, Ward AB

EMDB-48523:
RM017 Fab in complex with Apex-GT6.2 trimer and RM20A3 Fab
Method: single particle / : Pratap PP, Ozorowski G, Ward AB

EMDB-44341:
RM038 Fab in complex with Apex-GT 6.2 trimer and RM20A3 Fab
Method: single particle / : Pratap PP, Ozorowski G, Ward AB

EMDB-44342:
RM018 Fab in complex with Apex GT 6.2 trimer and RM20A3 Fab
Method: single particle / : Pratap PP, Ozorowski G, Ward AB

EMDB-49124:
Consensus reconstruction of the Dp71L-PP1A-eIF2alpha holophosphatase stabilized by G-actin/DNAseI
Method: single particle / : Reineke LC, Dalwadi U, Croll T, Arthur C, Lee DJ, Frost A, Costa-Mattioli M

EMDB-49162:
Focused refinement of G-actin within the Dp71L-PP1A-eIF2alpha-DNAseI-G-actin complex
Method: single particle / : Dalwadi U, Reineke LC, Lee DJ, Arthur C, Croll T, Frost A, Costa-Mattioli M

EMDB-49163:
Focused refinement of the Dp71L-eIF2alpha-PP1A subcomplex within the holo-phosphatase complex.
Method: single particle / : Dalwadi U, Reineke LC, Lee DJ, Arthur C, Croll T, Frost A, Costa-Mattioli M

EMDB-49164:
Focused refinement of DNAseI within the Dp71L-eIF2alpha-PP1A-Gactin-DNAseI holo-phosphatase complex.
Method: single particle / : Dalwadi U, Reineke LC, Lee DJ, Arthur C, Croll T, Frost A, Costa-Mattioli M

EMDB-49223:
Viral protein DP71L in complex with phosphorylated eIF2alpha (NTD) and protein phosphatase 1A (D64A), stabilized by G-actin/DNAseI
Method: single particle / : Reineke LC, Dalwadi U, Croll T, Arthur C, Lee DJ, Frost A, Costa-Mattioli M

EMDB-70841:
Human glutamine synthetase filament under turnover conditions
Method: single particle / : Greene ER, Muniz RS, Kollman JM, Fraser JS

EMDB-70842:
Human glutamine synthetase filament bound to ATP
Method: single particle / : Greene ER, Muniz RS, Kollman JM, Fraser JS

EMDB-70843:
Human glutamine synthetase decamer under turnover conditions
Method: single particle / : Greene ER, Muniz RS, Kollman JM, Fraser JS

EMDB-70844:
Human glutamine synthetase R298A decamer under turnover conditions
Method: single particle / : Greene ER, Muniz RS, Kollman JM, Fraser JS

EMDB-70845:
Human glutamine synthetase filament apo
Method: single particle / : Greene ER, Muniz RS, Kollman JM, Fraser JS

EMDB-48575:
G002-293-0536 Fab in complex with 001428_T278M_L14 SOSIP and RM20A3 Fab
Method: single particle / : Phulera S, Ozorowski G, Ward AB

EMDB-48591:
G002-480-0546 Fab in complex with V703-0537_T278M_L14 SOSIP and BG18 Fab
Method: single particle / : Phulera S, Ozorowski G, Ward AB

EMDB-46047:
HIV Env JRFL NFL TD CC3+ trimer in complex with NHP #1 polyclonal Fab (gp120 interface, gp41-FP, gp41-base epitopes)
Method: single particle / : Sewall LM, Ozorowski G, Ward AB

EMDB-46048:
HIV Env ZM233 NFL TD CC3+ trimer in complex with NHP #1,2,3,4 polyclonal Fab (gp41-FP, gp41-base epitopes)
Method: single particle / : Sewall LM, Ozorowski G, Ward AB

EMDB-48283:
61-12A01 Fab in complex with HIV-1 GT1.1 v4.1 SOSIP Env trimer and RM20A3 Fab
Method: single particle / : Phulera S, Ozorowski G, Ward AB

EMDB-48286:
206-3G08 Fab in complex with HIV-1 GT1.1 v4.1 SOSIP Env trimer and RM20A3 Fab
Method: single particle / : Phulera S, Ozorowski G, Ward AB

EMDB-48287:
206-9C09 Fab in complex with HIV-1 GT1.1 v4.1 SOSIP Env trimer and RM20A3 Fab
Method: single particle / : Phulera S, Ozorowski G, Ward AB

EMDB-48290:
273-4D01 Fab in complex with HIV-1 BG505 SOSIP Env trimer and RM20A3 Fab
Method: single particle / : Phulera S, Ozorowski G, Ward AB

EMDB-48291:
253-7A03 Fab in complex with HIV-1 BG505 SOSIP Env trimer and RM20A3 Fab
Method: single particle / : Phulera S, Ozorowski G, Ward AB

EMDB-70490:
BG505 GT1.1 SOSIP in complex with gp41-base epitope polyclonal antibodies isolated from a participant in the IAVI C101 clinical trial
Method: single particle / : Ozorowski G, Ward AB

Pages:

+
About EMN search

-
News

-
Feb 9, 2022. New format data for meta-information of EMDB entries

New format data for meta-information of EMDB entries

  • Version 3 of the EMDB header file is now the official format.
  • The previous official version 1.9 will be removed from the archive.

Related info.:EMDB header

External links:wwPDB to switch to version 3 of the EMDB data model

-
Oct 5, 2021. Nobel Prize for mechanically activated and temperature-gated ion channels

Nobel Prize for mechanically activated and temperature-gated ion channels

  • The Nobel Prize in Physiology or Medicine 2021 was awarded jointly to David Julius and Ardem Patapoutian "for their discoveries of receptors for temperature and touch."
  • EM Navigator can help to find cryo-EM structure data by both pioneers.

External links:The Nobel Prize in Physiology or Medicine 2021 - NobelPrize.org / Structure data by Ardem Patapoutian / Structure data by David Julius

+
Aug 12, 2020. Covid-19 info

Covid-19 info

URL: https://pdbj.org/emnavi/covid19.php

New page: Covid-19 featured information page in EM Navigator.

Related info.:Covid-19 info / Mar 5, 2020. Novel coronavirus structure data

+
Mar 5, 2020. Novel coronavirus structure data

Novel coronavirus structure data

Related info.:Yorodumi Speices / Aug 12, 2020. Covid-19 info

External links:COVID-19 featured content - PDBj / Molecule of the Month (242):Coronavirus Proteases

+
Jul 5, 2019. Downlodablable text data

Downlodablable text data

Some data of EM Navigator services can be downloaded as text file. Software such as Excel can load the data files.

PageDataFormat
EMN Searchsearch resultCSV, TSV, or JSON
EMN statisticsdata tableCSV or TSV

Related info.:EMN Search / EMN Statistics

-
EMN Search

3DEM data search

Advanced data search for EMDB and EM data in PDB widh various search and display options

Related info.:EMDB / PDB / EM Navigator / Q: What are the data sources of EM Navigator? / Yorodumi Search / Jul 5, 2019. Downlodablable text data

Read more