[English] 日本語
- 3DEM data search -

-
Search query


Keywords
Database /
Q: What are the data sources of EM Navigator?
Data entries / weeks ago
Q: When the data are updated?
Author
Processing method
Display mode
Sort by
Num. of entries / page
Entry
Article
Sample
Experiment
Processing
Max number of data0 for all data
File format
  • CSV format (Comma-Separated Values, for Excel, etc.)
  • TSV format (Tab Separated Values, for Excel, etc.)
  • JSON format

Yorodumi Search

-
Search result

Showing 1 - 50 of 1,351 items for (author: kus & k)

EMDB-48098:
Human FANCJ helicase bound to a fork DNA in the closed state
Method: single particle / : You Q, Li H

EMDB-48099:
Human FANCJ helicase bound to a fork DNA in the open state
Method: single particle / : You Q, Li H

PDB-9eja:
Human FANCJ helicase bound to a fork DNA in the closed state
Method: single particle / : You Q, Li H

PDB-9ejb:
Human FANCJ helicase bound to a fork DNA in the open state
Method: single particle / : You Q, Li H

EMDB-48096:
Human FANCJ helicase bound to a parallel G4 DNA
Method: single particle / : You Q, Li H

PDB-9ej9:
Human FANCJ helicase bound to a parallel G4 DNA
Method: single particle / : You Q, Li H

EMDB-63262:
Cryo-EM structure of the chromatin remodeler Rad26 bound to the nucleosome at SHL6
Method: single particle / : Fukushima Y, Takizawa Y, Kinoshita C, Ogasawara M, Kagawa W, Kurumizaka H

PDB-9lox:
Cryo-EM structure of the chromatin remodeler Rad26 bound to the nucleosome at SHL6
Method: single particle / : Fukushima Y, Takizawa Y, Kinoshita C, Ogasawara M, Kagawa W, Kurumizaka H

EMDB-67558:
Cryo-EM structure of ex vivo Sup35 prion fibrils from yeast carrying "strong" [PSI+] variant
Method: helical / : Chesnokov YM, Burtseva AD, Dergalev AA, Baimukhametov TN, Kushnirov VV, Popov VO, Boyko KM

PDB-21bq:
Cryo-EM structure of ex vivo Sup35 prion fibrils from yeast carrying "strong" [PSI+] variant
Method: helical / : Chesnokov YM, Burtseva AD, Dergalev AA, Baimukhametov TN, Kushnirov VV, Popov VO, Boyko KM

EMDB-73048:
Human type 2 IP3 receptor apo state consensus map
Method: single particle / : Liu C, Lan Y, Tang Q, Karakas E

EMDB-73049:
Human type 2 IP3 receptor apo state ligand binding domain (LBD) local refinement
Method: single particle / : Liu C, Lan Y, Tang Q, Karakas E

EMDB-73050:
Human type 2 IP3 receptor apo state central linker domain (CLD) local refinement
Method: single particle / : Liu C, Lan Y, Tang Q, Karakas E

EMDB-73051:
Human type 2 IP3 receptor apo state ARM2 domain local refinement
Method: single particle / : Liu C, Lan Y, Tang Q, Karakas E

EMDB-73052:
Human type 2 IP3 receptor apo state ARM3-JD domain local refinement
Method: single particle / : Liu C, Lan Y, Tang Q, Karakas E

EMDB-73053:
Human type 2 IP3 receptor apo state transmembrane domain (TMD) local refinement
Method: single particle / : Liu C, Lan Y, Tang Q, Karakas E

EMDB-73054:
Human type 2 IP3 receptor in apo state
Method: single particle / : Liu C, Lan Y, Tang Q, Karakas E

EMDB-73061:
IP3/ATP bound human type 2 IP3 receptor in the resting state - Consensus map
Method: single particle / : Liu C, Lan Y, Tang Q, Karakas E

EMDB-73062:
Local refined ligand-binding domain (LBD) of IP3/ATP bound human type 2 IP3 receptor in the resting state
Method: single particle / : Liu C, Lan Y, Tang Q, Karakas E

EMDB-73063:
Local refined central linker domain (CLD) of IP3/ATP bound human type 2 IP3 receptor in the resting state
Method: single particle / : Liu C, Lan Y, Tang Q, Karakas E

EMDB-73064:
Local refined ARM2 domain of IP3/ATP bound human type 2 IP3 receptor in the resting state
Method: single particle / : Liu C, Lan Y, Tang Q, Karakas E

EMDB-73065:
Local refined ARM3-JD domains of IP3/ATP bound human type 2 IP3 receptor in the resting state
Method: single particle / : Liu C, Lan Y, Tang Q, Karakas E

EMDB-73066:
Local refined transmembrane domain (TMD) of IP3/ATP bound human type 2 IP3 receptor in the resting state
Method: single particle / : Liu C, Lan Y, Tang Q, Karakas E

EMDB-73067:
IP3/ATP-bound human type 2 IP3 receptor in the resting state
Method: single particle / : Liu C, Lan Y, Tang Q, Karakas E

EMDB-73082:
IP3/ATP-bound human type 2 IP3 receptor in the preactivated state - Consensus map
Method: single particle / : Liu C, Lan Y, Tang Q, Karakas E

EMDB-73083:
Local refined ligand-binding domain (LBD) of IP3/ATP-bound human type 2 IP3 receptor in the preactivated state
Method: single particle / : Liu C, Lan Y, Tang Q, Karakas E

EMDB-73084:
Local refined central linker domain (CLD) of IP3/ATP-bound human type 2 IP3 receptor in the preactivated state
Method: single particle / : Liu C, Lan Y, Tang Q, Karakas E

EMDB-73085:
Local refined ARM2 domain of IP3/ATP-bound human type 2 IP3 receptor in the preactivated state
Method: single particle / : Liu C, Lan Y, Tang Q, Karakas E

EMDB-73086:
Local refined ARM3-JD domains of IP3/ATP-bound human type 2 IP3 receptor in the preactivated state
Method: single particle / : Liu C, Lan Y, Tang Q, Karakas E

EMDB-73087:
Local refined transmembrane domain (TMD) of IP3/ATP-bound human type 2 IP3 receptor in the preactivated state
Method: single particle / : Liu C, Lan Y, Tang Q, Karakas E

EMDB-73088:
IP3/ATP-bound human type 2 IP3 receptor in the preactivated state
Method: single particle / : Liu C, Lan Y, Tang Q, Karakas E

EMDB-73111:
Human type 2 IP3 receptor in the inactive-like state (IP3/ATP) Consensus Map
Method: single particle / : Liu C, Lan Y, Tang Q, Karakas E

EMDB-73112:
Local refined ligand-binding domain (LBD, chain A) of human type 2 IP3 receptor in the inactive-like state (IP3/ATP)
Method: single particle / : Liu C, Lan Y, Tang Q, Karakas E

EMDB-73113:
Local refined central linker domain (CLD, chain A) of human type 2 IP3 receptor in the inactive-like state (IP3/ATP)
Method: single particle / : Liu C, Lan Y, Tang Q, Karakas E

EMDB-73114:
Local refined ARM2 (chain A) of human type 2 IP3 receptor in the inactive-like state (IP3/ATP)
Method: single particle / : Liu C, Lan Y, Tang Q, Karakas E

EMDB-73115:
Local refined ARM3-JD (chain A) of human type 2 IP3 receptor in the inactive-like state (IP3/ATP)
Method: single particle / : Liu C, Lan Y, Tang Q, Karakas E

EMDB-73116:
Local refined central linker domain (CLD, chain B) of human type 2 IP3 receptor in the inactive-like state (IP3/ATP)
Method: single particle / : Liu C, Lan Y, Tang Q, Karakas E

EMDB-73117:
Local refined ARM2 (chain B) of human type 2 IP3 receptor in the inactive-like state (IP3/ATP)
Method: single particle / : Liu C, Lan Y, Tang Q, Karakas E

EMDB-73118:
Local refined ARM3-JD (chain B) of human type 2 IP3 receptor in the inactive-like state (IP3/ATP)
Method: single particle / : Liu C, Lan Y, Tang Q, Karakas E

EMDB-73119:
Local refined ARM3-JD (chain C) of human type 2 IP3 receptor in the inactive-like state (IP3/ATP)
Method: single particle / : Liu C, Lan Y, Tang Q, Karakas E

EMDB-73120:
Local refined JD (chain D) of human type 2 IP3 receptor in the inactive-like state (IP3/ATP
Method: single particle / : Liu C, Lan Y, Tang Q, Karakas E

EMDB-73121:
Local refined transmembrane domain (TMD) of human type 2 IP3 receptor in the inactive-like state (IP3/ATP)
Method: single particle / : Liu C, Lan Y, Tang Q, Karakas E

EMDB-73129:
Human type 2 IP3 receptor in the inactive-like state (IP3/ATP)
Method: single particle / : Liu C, Lan Y, Tang Q, Karakas E

EMDB-73198:
Human type 2 IP3 receptor in the inactive-like state (IP3/ATP/Ca2+) Consensus Map
Method: single particle / : Liu C, Lan Y, Tang Q, Karakas E

EMDB-73199:
Local refined ligand-binding domain (LBD, chain A) of human type 2 IP3 receptor in the inactive-like state (IP3/ATP/Ca2+)
Method: single particle / : Liu C, Lan Y, Tang Q, Karakas E

EMDB-73201:
Local refined central linker domain (CLD, chain A) of human type 2 IP3 receptor in the inactive-like state (IP3/ATP/Ca2+)
Method: single particle / : Liu C, Lan Y, Tang Q, Karakas E

EMDB-73202:
Local refined ARM2 (chain A) of human type 2 IP3 receptor in the inactive-like state (IP3/ATP/Ca2+)
Method: single particle / : Liu C, Lan Y, Tang Q, Karakas E

EMDB-73203:
Local refined ARM3-JD (chain A) of human type 2 IP3 receptor in the inactive-like state (IP3/ATP/Ca2+)
Method: single particle / : Liu C, Lan Y, Tang Q, Karakas E

EMDB-73204:
Local refined central linker domain (CLD, chain B) of human type 2 IP3 receptor in the inactive-like state (IP3/ATP/Ca2+)
Method: single particle / : Liu C, Lan Y, Tang Q, Karakas E

EMDB-73205:
Local refined ARM2 (chain B) of human type 2 IP3 receptor in the inactive-like state (IP3/ATP/Ca2+)
Method: single particle / : Liu C, Lan Y, Tang Q, Karakas E

Pages:

+
About EMN search

-
News

-
Feb 9, 2022. New format data for meta-information of EMDB entries

New format data for meta-information of EMDB entries

  • Version 3 of the EMDB header file is now the official format.
  • The previous official version 1.9 will be removed from the archive.

Related info.:EMDB header

External links:wwPDB to switch to version 3 of the EMDB data model

-
Oct 5, 2021. Nobel Prize for mechanically activated and temperature-gated ion channels

Nobel Prize for mechanically activated and temperature-gated ion channels

  • The Nobel Prize in Physiology or Medicine 2021 was awarded jointly to David Julius and Ardem Patapoutian "for their discoveries of receptors for temperature and touch."
  • EM Navigator can help to find cryo-EM structure data by both pioneers.

External links:The Nobel Prize in Physiology or Medicine 2021 - NobelPrize.org / Structure data by Ardem Patapoutian / Structure data by David Julius

+
Aug 12, 2020. Covid-19 info

Covid-19 info

URL: https://pdbj.org/emnavi/covid19.php

New page: Covid-19 featured information page in EM Navigator.

Related info.:Covid-19 info / Mar 5, 2020. Novel coronavirus structure data

+
Mar 5, 2020. Novel coronavirus structure data

Novel coronavirus structure data

Related info.:Yorodumi Speices / Aug 12, 2020. Covid-19 info

External links:COVID-19 featured content - PDBj / Molecule of the Month (242)：Coronavirus Proteases

+
Jul 5, 2019. Downlodablable text data

Downlodablable text data

Some data of EM Navigator services can be downloaded as text file. Software such as Excel can load the data files.

PageDataFormat
EMN Searchsearch resultCSV, TSV, or JSON
EMN statisticsdata tableCSV or TSV

Related info.:EMN Search / EMN Statistics

-
EMN Search

3DEM data search

Advanced data search for EMDB and EM data in PDB widh various search and display options

Related info.:EMDB / PDB / EM Navigator / Q: What are the data sources of EM Navigator? / Yorodumi Search / Jul 5, 2019. Downlodablable text data

Read more