[English] 日本語
- 3DEM data search -

-
Search query


Keywords
Database /
Q: What are the data sources of EM Navigator?
Data entries / weeks ago
Q: When the data are updated?
Author
Processing method
Display mode
Sort by
Num. of entries / page
Entry
Article
Sample
Experiment
Processing
Max number of data0 for all data
File format
  • CSV format (Comma-Separated Values, for Excel, etc.)
  • TSV format (Tab Separated Values, for Excel, etc.)
  • JSON format

Yorodumi Search

-
Search result

Showing 1 - 50 of 1,266 items for (author: kus & k)

EMDB-73364:
Factor XIa in complex with Fab fragment of REGN7508-Cat
Method: single particle / : Saotome K, Franklin MC

EMDB-73374:
Factor XIa in complex with Fab fragment of REGN9933-A2
Method: single particle / : Saotome K, Franklin MC

PDB-9yrb:
Factor XIa in complex with Fab fragment of REGN7508-Cat
Method: single particle / : Saotome K, Franklin MC

PDB-9yrq:
Factor XIa in complex with Fab fragment of REGN9933-A2
Method: single particle / : Saotome K, Franklin MC

EMDB-76733:
SARS-CoV-2 RNA-dependent RNA polymerase in complex with 4'-FlA nucleotide analogue
Method: single particle / : Park S, Gharpure A, Ward AB

PDB-12sn:
SARS-CoV-2 RNA-dependent RNA polymerase in complex with 4'-FlA nucleotide analogue
Method: single particle / : Park S, Gharpure A, Ward AB

EMDB-75946:
In situ cryo-ET analysis of mitochondria and autophagosome contact in tauP301S Tg mouse cortical neurons
Method: electron tomography / : Gonzalez CU, Jaber N

EMDB-75947:
In situ cryo-ET analysis of mitochondria and autophagosome contact in tauP301S Tg mouse cortical neurons Supplementary 1
Method: electron tomography / : Gonzalez CU, Jaber N

EMDB-75949:
In situ cryo-ET analysis of mitochondria and autophagosome contact in tauP301S Tg mouse cortical neurons Supplementary 2
Method: electron tomography / : Gonzalez CU, Jaber N

EMDB-75834:
Cryo-EM Structure of Human C3 Pro-Convertase bound to the Compstatin Analog Cp60, TED Conformation 1
Method: single particle / : Herbine K, Lambris J

EMDB-75835:
Cryo-EM Structure of Human C3 Pro-Convertase bound to the Compstatin Analog Cp60, TED Conformation 2
Method: single particle / : Herbine K, Lambris J

PDB-11mg:
Cryo-EM Structure of Human C3 Pro-Convertase bound to the Compstatin Analog Cp60, TED Conformation 1
Method: single particle / : Herbine K, Lambris J

PDB-11mh:
Cryo-EM Structure of Human C3 Pro-Convertase bound to the Compstatin Analog Cp60, TED Conformation 2
Method: single particle / : Herbine K, Lambris J

EMDB-56664:
Cryo-ET of IAV (WSN-M1-Udorn) supernatant
Method: electron tomography / : Peterl S, Chlanda P

EMDB-56667:
Cryo-ET of IAV (WSN-M1-Udorn) pellet
Method: electron tomography / : Peterl S, Chlanda P

EMDB-56668:
Cryo-ET of IAV (WSN-M1-Udorn) unfractionated
Method: electron tomography / : Peterl S, Chlanda P

EMDB-65674:
Cryo-EM structure of human ABCD3 in inward-facing conformation in the presence of phytanoyl-CoA
Method: single particle / : Aiba S, Okamoto HH, Kusakizako T, Nureki O

EMDB-65675:
Cryo-EM structure of C20:5-CoA bound state human ABCD3 in inward-facing conformation
Method: single particle / : Aiba S, Okamoto HH, Kusakizako T, Nureki O

EMDB-65676:
Cryo-EM structure of CHS bound state human ABCD3 in inward-facing conformation
Method: single particle / : Aiba S, Okamoto HH, Kusakizako T, Nureki O

EMDB-65677:
Cryo-EM structure of ATP bound state human ABCD3 in inward-facing conformation
Method: single particle / : Aiba S, Okamoto HH, Sano KF, Kusakizako T, Nureki O

EMDB-65678:
Cryo-EM structure of ATP bound state human ABCD3 in outward-facing conformation
Method: single particle / : Aiba S, Okamoto HH, Tomita A, Kusakizako T, Nureki O

PDB-9w62:
Cryo-EM structure of human ABCD3 in inward-facing conformation in the presence of phytanoyl-CoA
Method: single particle / : Aiba S, Okamoto HH, Kusakizako T, Nureki O

PDB-9w63:
Cryo-EM structure of C20:5-CoA bound state human ABCD3 in inward-facing conformation
Method: single particle / : Aiba S, Okamoto HH, Kusakizako T, Nureki O

PDB-9w64:
Cryo-EM structure of CHS bound state human ABCD3 in inward-facing conformation
Method: single particle / : Aiba S, Okamoto HH, Kusakizako T, Nureki O

PDB-9w65:
Cryo-EM structure of ATP bound state human ABCD3 in inward-facing conformation
Method: single particle / : Aiba S, Okamoto HH, Sano KF, Kusakizako T, Nureki O

PDB-9w66:
Cryo-EM structure of ATP bound state human ABCD3 in outward-facing conformation
Method: single particle / : Aiba S, Okamoto HH, Tomita A, Kusakizako T, Nureki O

EMDB-55792:
1.79 A cryo-EM structure of Mycobacterium tuberculosis BfrB prepared under natural isotope abundance
Method: single particle / : Hakke SS, Noteborn WEM, Knoops K, Heeren RMA

EMDB-55793:
1.80 A cryo-EM structure of Mycobacterium tuberculosis BfrB prepared under isotope-depleted abundance
Method: single particle / : Hakke SS, Noteborn WEM, Knoops K, Heeren RMA

PDB-9tcm:
1.79 A cryo-EM structure of Mycobacterium tuberculosis BfrB prepared under natural isotope abundance
Method: single particle / : Hakke SS, Noteborn WEM, Knoops K, Heeren RMA

PDB-9tcn:
1.80 A cryo-EM structure of Mycobacterium tuberculosis BfrB prepared under isotope-depleted abundance
Method: single particle / : Hakke SS, Noteborn WEM, Knoops K, Heeren RMA

EMDB-55425:
Cryo-EM reconstruction of the Kinesin KIF5A motor domain decorated GMPCPP microtubule
Method: single particle / : Munoz-Hernandez H, Wieczorek M

EMDB-55431:
Cryo-EM reconstruction of undecorated GDP microtubule
Method: single particle / : Munoz-Hernandez H, Wieczorek M

EMDB-55440:
Cryo-EM reconstruction of undecorated GDP microtubule (13-3)
Method: single particle / : Munoz-Hernandez H, Wieczorek M

EMDB-55444:
Cryo-EM reconstruction of the Kinesin KIF5A motor domain decorated GMPCPP microtubule (14-3)
Method: single particle / : Munoz-Hernandez H, Wieczorek M

PDB-9t17:
Cryo-EM reconstruction of the Kinesin KIF5A motor domain decorated GMPCPP microtubule
Method: single particle / : Munoz-Hernandez H, Wieczorek M

PDB-9t1d:
Cryo-EM reconstruction of undecorated GDP microtubule
Method: single particle / : Munoz-Hernandez H, Wieczorek M

EMDB-76230:
Structure of TMEM106B doublet from patient brain derived lysosomes
Method: subtomogram averaging / : Fernandez MF, Mosalaganti S

EMDB-76248:
Structure of TMEM106B singlet from patient brain derived lysosomes
Method: subtomogram averaging / : Fernandez MF, Mosalaganti S

EMDB-55166:
RAD51-ssDNA filament in complex with calcium and ATP bound by the RAD54B N-terminus
Method: single particle / : Liang P, Zhang X

EMDB-55189:
RAD51-ssDNA filament in complex with magnesium and ATP bound by the RAD54B N-terminus (peptide)
Method: single particle / : Liang P, Zhang X

EMDB-56178:
RAD51-ssDNA filament in complex with magnesium and ATP bound by the RAD54B N-terminus (beta-barrel)
Method: single particle / : Liang P, Zhang X

EMDB-56179:
RAD51-dsDNA filament in complex with calcium and ATP bound by the RAD54B N-terminus
Method: single particle / : Liang P, Zhang X

EMDB-56447:
RAD51-ssDNA filament in complex with calcium and ATP bound by the RAD54 N-terminus
Method: single particle / : Liang P, Zhang X

PDB-9srz:
RAD51-ssDNA filament in complex with calcium and ATP bound by the RAD54B N-terminus
Method: single particle / : Liang P, Zhang X

PDB-9ssl:
RAD51-ssDNA filament in complex with magnesium and ATP bound by the RAD54B N-terminus (peptide)
Method: single particle / : Liang P, Zhang X

PDB-9trl:
RAD51-ssDNA filament in complex with magnesium and ATP bound by the RAD54B N-terminus (beta-barrel)
Method: single particle / : Liang P, Zhang X

PDB-9trm:
RAD51-dsDNA filament in complex with calcium and ATP bound by the RAD54B N-terminus
Method: single particle / : Liang P, Zhang X

PDB-9tyy:
RAD51-ssDNA filament in complex with calcium and ATP bound by the RAD54 N-terminus
Method: single particle / : Liang P, Zhang X

EMDB-56682:
In situ ribosome structure from environmental sample of Pseudo-nitzschia
Method: subtomogram averaging / : Leisch N, Pyle E

EMDB-75842:
Influenza A virus Hemagglutinin (A/Darwin/6/2021 H3N2) (C1 symmetry) determined using the SPT Labtech chameleon in the presence of 0x SurfACT
Method: single particle / : Enos SE, Cook BD, Rahmani H, Narehood SM, Li Y, Kuschnerus IC, Redford HT, Dukakis P, Ji D, Bachochin MJ, Grotjahn DA, Herzik MA

Pages:

+
About EMN search

-
News

-
Feb 9, 2022. New format data for meta-information of EMDB entries

New format data for meta-information of EMDB entries

  • Version 3 of the EMDB header file is now the official format.
  • The previous official version 1.9 will be removed from the archive.

Related info.:EMDB header

External links:wwPDB to switch to version 3 of the EMDB data model

-
Oct 5, 2021. Nobel Prize for mechanically activated and temperature-gated ion channels

Nobel Prize for mechanically activated and temperature-gated ion channels

  • The Nobel Prize in Physiology or Medicine 2021 was awarded jointly to David Julius and Ardem Patapoutian "for their discoveries of receptors for temperature and touch."
  • EM Navigator can help to find cryo-EM structure data by both pioneers.

External links:The Nobel Prize in Physiology or Medicine 2021 - NobelPrize.org / Structure data by Ardem Patapoutian / Structure data by David Julius

+
Aug 12, 2020. Covid-19 info

Covid-19 info

URL: https://pdbj.org/emnavi/covid19.php

New page: Covid-19 featured information page in EM Navigator.

Related info.:Covid-19 info / Mar 5, 2020. Novel coronavirus structure data

+
Mar 5, 2020. Novel coronavirus structure data

Novel coronavirus structure data

Related info.:Yorodumi Speices / Aug 12, 2020. Covid-19 info

External links:COVID-19 featured content - PDBj / Molecule of the Month (242):Coronavirus Proteases

+
Jul 5, 2019. Downlodablable text data

Downlodablable text data

Some data of EM Navigator services can be downloaded as text file. Software such as Excel can load the data files.

PageDataFormat
EMN Searchsearch resultCSV, TSV, or JSON
EMN statisticsdata tableCSV or TSV

Related info.:EMN Search / EMN Statistics

-
EMN Search

3DEM data search

Advanced data search for EMDB and EM data in PDB widh various search and display options

Related info.:EMDB / PDB / EM Navigator / Q: What are the data sources of EM Navigator? / Yorodumi Search / Jul 5, 2019. Downlodablable text data

Read more