[English] 日本語
- 3DEM data search -

-
Search query


Keywords
Database /
Q: What are the data sources of EM Navigator?
Data entries / weeks ago
Q: When the data are updated?
Author
Processing method
Display mode
Sort by
Num. of entries / page
Entry
Article
Sample
Experiment
Processing
Max number of data0 for all data
File format
  • CSV format (Comma-Separated Values, for Excel, etc.)
  • TSV format (Tab Separated Values, for Excel, etc.)
  • JSON format

Yorodumi Search

-
Search result

Showing 1 - 50 of 3,784 items for (author: kan & z)

EMDB-56033:
CryoEM structure of coxsackievirus B1 virus-like particle with VP4 deletion
Method: single particle / : Levanova AL, Guryanov S, Ahmad KLL, Butcher SJ

PDB-9tkm:
CryoEM structure of coxsackievirus B1 virus-like particle with VP4 deletion
Method: single particle / : Levanova AL, Guryanov S, Ahmad KLL, Butcher SJ

EMDB-66042:
Open State of Apo-P-Glycoprotein
Method: single particle / : Hamaguchi-Suzuki N, Kanaoka Y, Ogasawara S, Murata T, Uchihashi T

EMDB-66043:
Closed State of Apo-P-Glycoprotein.
Method: single particle / : Hamaguchi-Suzuki N, Kanaoka Y, Ogasawara S, Murata T, Uchihashi T

EMDB-64920:
Cryo-EM structure of CARD1 ectodomain
Method: single particle / : Fukuda Y, Ishihama N, Laohavisit A

EMDB-64934:
Cryo-EM structure of a CARD1 ectodomain H197A/H199A/H222A mutant
Method: single particle / : Fukuda Y, Ishihama N, Laohavisit A

EMDB-68666:
Human 80S ribosome in complex with DHX29
Method: single particle / : Goto-Ito S, Iwasaki W, Ito T

PDB-22tu:
Human 80S ribosome in complex with DHX29
Method: single particle / : Goto-Ito S, Iwasaki W, Ito T

EMDB-55303:
Adenovirus dodecahedron
Method: single particle / : Kabasakal BV, Buzas D, Bufton J, Berger-Schaffitzel C, Berger I

EMDB-55340:
Engineering the ADDomer Nanoparticle Vaccine Scaffold for Improved Assembly and Enhanced Stability.
Method: single particle / : Balchin G, Berger-Schaffitzel C, Berger I

EMDB-55341:
I4 map of CHIMPSELS_S57C full ADDomer.
Method: single particle / : Balchin G, Berger-Schaffitzel C, Berger I

EMDB-55342:
C1 CHIMPSELS_S57C ADDomer map.
Method: single particle / : Balchin G, Berger-Schaffitzel C, Berger I

PDB-9swa:
Adenovirus dodecahedron
Method: single particle / : Kabasakal BV, Buzas D, Bufton J, Berger-Schaffitzel C, Berger I

PDB-9sy5:
Engineering the ADDomer Nanoparticle Vaccine Scaffold for Improved Assembly and Enhanced Stability.
Method: single particle / : Balchin G, Berger-Schaffitzel C, Berger I

EMDB-68805:
Structure of Arabidopsis SNX1 (Class l, 7-fold)
Method: helical / : Li YB, Tao R, Zhang H, Wen XK, Leung SKP, Lau WCY, Jiang LW, Cui Y

EMDB-68806:
Structure of Arabidopsis SNX1 (Class ll, 6-fold)
Method: helical / : Li YB, Tao R, Zhang H, Wen XK, Leung SKP, Lau WCY, Jiang LW, Cui Y

PDB-23as:
Structure of Arabidopsis SNX1 (Class l, 7-fold)
Method: helical / : Li YB, Tao R, Zhang H, Wen XK, Leung SKP, Lau WCY, Jiang LW, Cui Y

PDB-23at:
Structure of Arabidopsis SNX1 (Class ll, 6-fold)
Method: helical / : Li YB, Tao R, Zhang H, Wen XK, Leung SKP, Lau WCY, Jiang LW, Cui Y

EMDB-64935:
Lectin FRIL from Lablab purpureus complexed to Lewis X tetrasaccharide
Method: single particle / : Nguyen VHT, Chen X, Liu YM, Ma C

EMDB-64936:
Lectin FRIL from Lablab purpureus with self glycan
Method: single particle / : Nguyen VHT, Liu YM, Chen X, Ma C

EMDB-64937:
Lectin FRIL from Lablab purpureus complexed to oligomannose
Method: single particle / : Nguyen VHT, Liu YM, Ma C

EMDB-64938:
Lectin FRIL from Lablab purpureus complexed to oligomannose
Method: single particle / : Nguyen VHT, Liu YM, Ma C

PDB-9vbx:
Lectin FRIL from Lablab purpureus complexed to Lewis X tetrasaccharide
Method: single particle / : Nguyen VHT, Chen X, Liu YM, Ma C

PDB-9vby:
Lectin FRIL from Lablab purpureus with self glycan
Method: single particle / : Nguyen VHT, Liu YM, Chen X, Ma C

PDB-9vbz:
Lectin FRIL from Lablab purpureus complexed to oligomannose
Method: single particle / : Nguyen VHT, Liu YM, Ma C

PDB-9vc0:
Lectin FRIL from Lablab purpureus complexed to oligomannose
Method: single particle / : Nguyen VHT, Liu YM, Ma C

EMDB-70619:
In situ mitoribosome focused on the mtLSU
Method: single particle / : Wang S, Xiong Y, Zhang Y

EMDB-66181:
Cryo-EM structure of LH1-RC from Rhodovulum sulfidophilum
Method: single particle / : Yue XY, Wang GL, Yu LJ

PDB-9wqv:
Cryo-EM structure of LH1-RC from Rhodovulum sulfidophilum
Method: single particle / : Yue XY, Wang GL, Yu LJ

EMDB-65103:
Structure of a membrane-bound inositol phosphorylceramide synthase and ceramide complex
Method: single particle / : Chen JH, Ke Y, Zhang M, Yu HJ

EMDB-66750:
Structure of a membrane-bound inositol phosphorylceramide synthase and Aureobasidin A complex
Method: single particle / : Chen JH, Ke Y, Zhang M, Yu HJ

PDB-9vj4:
Structure of a membrane-bound inositol phosphorylceramide synthase and ceramide complex
Method: single particle / : Chen JH, Ke Y, Zhang M, Yu HJ

PDB-9xd0:
Structure of a membrane-bound inositol phosphorylceramide synthase and Aureobasidin A complex
Method: single particle / : Chen JH, Ke Y, Zhang M, Yu HJ

EMDB-55369:
Control media rat neuronal 80S ribosome - consensus
Method: subtomogram averaging / : Schwarz A, Schuman EM

EMDB-55370:
Control media rat neuronal 80S ribosome state - decoding
Method: subtomogram averaging / : Schwarz A, Schuman EM

EMDB-55371:
Control media rat neuronal 80S ribosome state - peptide bond formation
Method: subtomogram averaging / : Schwarz A, Schuman EM

EMDB-55372:
Control media rat neuronal 80S ribosome state - pre-translocating
Method: subtomogram averaging / : Schwarz A, Schuman EM

EMDB-55373:
Control media rat neuronal 80S ribosome state - hibernating I
Method: subtomogram averaging / : Schwarz A, Schuman EM

EMDB-55374:
Nutrient deprived rat neuronal 80S ribosome - consensus
Method: subtomogram averaging / : Schwarz A, Schuman EM

EMDB-55375:
Nutrient deprived rat neuronal 80S ribosome state - decoding
Method: subtomogram averaging / : Schwarz A, Schuman EM

EMDB-55376:
Nutrient deprived rat neuronal 80S ribosome state - peptide bond formation
Method: subtomogram averaging / : Schwarz A, Schuman EM

EMDB-55377:
Nutrient deprived rat neuronal 80S ribosome state - pre-translocating
Method: subtomogram averaging / : Schwarz A, Schuman EM

EMDB-55378:
Nutrient deprived rat neuronal 80S ribosome state - hibernating II
Method: subtomogram averaging / : Schwarz A, Schuman EM

EMDB-55379:
Nutrient deprived rat neuronal 80S ribosome state - hibernating III
Method: subtomogram averaging / : Schwarz A, Schuman EM

EMDB-55381:
Nutrient deprived rat neuronal 80S ribosome state - hibernating IV
Method: subtomogram averaging / : Schwarz A, Schuman EM

EMDB-55383:
Nutrient deprived rat neuronal 110S disome
Method: subtomogram averaging / : Schwarz A, Schuman EM

EMDB-55384:
1 h nitrogen + carbon starved yeast-rat-hybrid hibernating disome
Method: subtomogram averaging / : Schwarz A, Schuman EM, Dietrich LT

EMDB-55385:
3-4 h cold shock chicken neuronal hibernating tetrasome
Method: subtomogram averaging / : Schwarz A, Schuman EM, Dietrich LT

EMDB-66199:
Cryo-EM structure of Sigma28-RNAP open promoter complex from Pseudomonas aeruginosa
Method: single particle / : Nln S, Kumar V, Sahoo PK, Kandiah E, Jain D

PDB-9wsm:
Cryo-EM structure of Sigma28-RNAP open promoter complex from Pseudomonas aeruginosa
Method: single particle / : Nln S, Kumar V, Sahoo PK, Kandiah E, Jain D

Pages:

+
About EMN search

-
News

-
Feb 9, 2022. New format data for meta-information of EMDB entries

New format data for meta-information of EMDB entries

  • Version 3 of the EMDB header file is now the official format.
  • The previous official version 1.9 will be removed from the archive.

Related info.:EMDB header

External links:wwPDB to switch to version 3 of the EMDB data model

-
Oct 5, 2021. Nobel Prize for mechanically activated and temperature-gated ion channels

Nobel Prize for mechanically activated and temperature-gated ion channels

  • The Nobel Prize in Physiology or Medicine 2021 was awarded jointly to David Julius and Ardem Patapoutian "for their discoveries of receptors for temperature and touch."
  • EM Navigator can help to find cryo-EM structure data by both pioneers.

External links:The Nobel Prize in Physiology or Medicine 2021 - NobelPrize.org / Structure data by Ardem Patapoutian / Structure data by David Julius

+
Aug 12, 2020. Covid-19 info

Covid-19 info

URL: https://pdbj.org/emnavi/covid19.php

New page: Covid-19 featured information page in EM Navigator.

Related info.:Covid-19 info / Mar 5, 2020. Novel coronavirus structure data

+
Mar 5, 2020. Novel coronavirus structure data

Novel coronavirus structure data

Related info.:Yorodumi Speices / Aug 12, 2020. Covid-19 info

External links:COVID-19 featured content - PDBj / Molecule of the Month (242)：Coronavirus Proteases

+
Jul 5, 2019. Downlodablable text data

Downlodablable text data

Some data of EM Navigator services can be downloaded as text file. Software such as Excel can load the data files.

PageDataFormat
EMN Searchsearch resultCSV, TSV, or JSON
EMN statisticsdata tableCSV or TSV

Related info.:EMN Search / EMN Statistics

-
EMN Search

3DEM data search

Advanced data search for EMDB and EM data in PDB widh various search and display options

Related info.:EMDB / PDB / EM Navigator / Q: What are the data sources of EM Navigator? / Yorodumi Search / Jul 5, 2019. Downlodablable text data

Read more