[English] 日本語
- 3DEM data search -

-
Search query


Keywords
Database /
Q: What are the data sources of EM Navigator?
Data entries / weeks ago
Q: When the data are updated?
Author
Processing method
Display mode
Sort by
Num. of entries / page
Entry
Article
Sample
Experiment
Processing
Max number of data0 for all data
File format
  • CSV format (Comma-Separated Values, for Excel, etc.)
  • TSV format (Tab Separated Values, for Excel, etc.)
  • JSON format

Yorodumi Search

-
Search result

Showing 1 - 50 of 615 items for (author: julie & at)

EMDB-56106:
Human Cardiac Interacting Heads Motif, E525K mutant
Method: single particle / : Lannes L, Kikuti CM, Auguin D, Robert-Paganin J, Houdusse A

EMDB-56107:
Human Cardiac Interacting Heads Motif, Conformation B
Method: single particle / : Kikuti CM, Lannes L, Auguin D, Robert-Paganin J, Houdusse A

EMDB-56108:
Human Cardiac Interacting Heads Motif, Conformation A
Method: single particle / : Kikuti CM, Lannes L, Auguin D, Robert-Paganin J, Houdusse A

PDB-9tpj:
Human Cardiac Interacting Heads Motif, E525K mutant
Method: single particle / : Lannes L, Kikuti CM, Auguin D, Robert-Paganin J, Houdusse A

PDB-9tpk:
Human Cardiac Interacting Heads Motif, Conformation B
Method: single particle / : Kikuti CM, Lannes L, Auguin D, Robert-Paganin J, Houdusse A

PDB-9tpl:
Human Cardiac Interacting Heads Motif, Conformation A
Method: single particle / : Kikuti CM, Lannes L, Auguin D, Robert-Paganin J, Houdusse A

EMDB-75431:
The cryoEM structure of T10 type2 nanofiber
Method: helical / : Zhang H, Yang Y

EMDB-75434:
The CryoEM structure of T12 type1 nanofiber
Method: helical / : Zhang H, Yang Y

EMDB-75435:
The CryoEM structure of T12 type2 nanofiber
Method: helical / : Zhang H, Yang Y

PDB-10sd:
The cryoEM structure of T10 type2 nanofiber
Method: helical / : Zhang H, Yang Y

PDB-10sg:
The CryoEM structure of T12 type1 nanofiber
Method: helical / : Zhang H, Yang Y

PDB-10sh:
The CryoEM structure of T12 type2 nanofiber
Method: helical / : Zhang H, Yang Y

EMDB-52524:
Ku70/80 bound to WRN-exo
Method: single particle / : Hardwick SW, Zahid S, Chaplin AK, Ropars R, Charbonnier JB

PDB-9hzg:
Ku70/80 bound to WRN-exo
Method: single particle / : Hardwick SW, Zahid S, Chaplin AK, Ropars R, Charbonnier JB

EMDB-72367:
Teichoic acid flippase TacF from Streptococcus pneumoniae
Method: single particle / : Cebrero G, Chidananda HA, Denereaz JL, Cester E, Mathew AT, Bhowmik DR, Capitani M, Reymond JL, Kannan N, Veening JW, Mehdipour AR, Perez C

PDB-9xzn:
Teichoic acid flippase TacF from Streptococcus pneumoniae
Method: single particle / : Cebrero G, Chidananda HA, Denereaz JL, Cester E, Mathew AT, Bhowmik DR, Capitani M, Reymond JL, Kannan N, Veening JW, Mehdipour AR, Perez C

EMDB-53993:
Polar sheathed flagella with reduced flagellins in Vibrio alginolyticus
Method: electron tomography / : Qin K, Einenkel R, Zhao W, Atherton J, Erhardt M, Bergeron JRC

EMDB-53912:
Unsheathed flagellar filament in Vibrio alginolyticus
Method: single particle / : Qin K, Einenkel R, Zhao W, Erhardt M, Bergeron JRC

EMDB-53917:
Sheathed flagellar filament in Vibrio alginolyticus
Method: single particle / : Qin K, Einenkel R, Erhardt M, Bergeron JRC

EMDB-53992:
Polar sheathed flagella tips in Vibrio alginolyticus
Method: electron tomography / : Qin K, Einenkel R, Zhao W, Atherton J, Erhardt M, Bergeron JRC

PDB-9rcb:
Unsheathed flagellar filament in Vibrio alginolyticus
Method: single particle / : Qin K, Einenkel R, Zhao W, Erhardt M, Bergeron JRC

PDB-9rcd:
Sheathed flagellar filament in Vibrio alginolyticus
Method: single particle / : Qin K, Einenkel R, Erhardt M, Bergeron JRC

EMDB-49130:
Stabilized tandem antigen chimera of Pfs230 and Pfs48/45 bound by potent mAbs
Method: single particle / : Hailemariam S, Ivanochko D, Julien JP

PDB-9n8j:
Stabilized tandem antigen chimera of Pfs230 and Pfs48/45 bound by potent mAbs
Method: single particle / : Hailemariam S, Ivanochko D, Julien JP

EMDB-49942:
Cryo-EM structure of CDK2/CyclinE1 in complex with CRBN/DDB1 and Cpd 24
Method: single particle / : Collier P, Zheng X, Ford M, Weiss M, Aversa R, Chen D, Li K, Growney JD, Yang A, Sathappa M, Breitkopf SB, Enerson B, Sawant R, Su L, Howarth L, Liang T, Paul A, Sharma K, Williams J, Kwiatkowski NP

PDB-9nyr:
Cryo-EM structure of CDK2/CyclinE1 in complex with CRBN/DDB1 and Cpd 24
Method: single particle / : Collier P, Zheng X, Ford M, Weiss M, Aversa R, Chen D, Li K, Growney JD, Yang A, Sathappa M, Breitkopf SB, Enerson B, Sawant R, Su L, Howarth L, Liang T, Paul A, Sharma K, Williams J, Kwiatkowski NP

EMDB-70288:
Cryo-EM structure of EBV gB prefusion construct C3-GT
Method: single particle / : McCool RS, McLellan JS

PDB-9oal:
Cryo-EM structure of EBV gB prefusion construct C3-GT
Method: single particle / : McCool RS, McLellan JS

EMDB-49708:
cryo-EM structure of broad betacoronavirus binding antibody 1871 in complex with OC43 S2 subunit
Method: single particle / : Muthuraman K, Jackman MJ, Julien JP

PDB-9nqz:
cryo-EM structure of broad betacoronavirus binding antibody 1871 in complex with OC43 S2 subunit
Method: single particle / : Muthuraman K, Jackman MJ, Julien JP

EMDB-70613:
Cryo-EM structure of rhesus antibody V033-Int1 in complex with HIV Env trimer Q23.17 MD39
Method: single particle / : Roark RS, Shapiro L, Kwong PD

PDB-9omg:
Cryo-EM structure of rhesus antibody V033-a.I1 in complex with HIV Env trimer Q23.17 MD39
Method: single particle / : Roark RS, Shapiro L, Kwong PD

EMDB-48922:
Endogenous Pfs230D13-14 in complex with Pfs48/45 bound to anti-Pfs48/45 Fabs RUPA-71 and RUPA-44
Method: single particle / : Hailemariam S, Heide F, Bekkering E, Ivanochko D, Yoo R, Julien JP

PDB-9n5i:
Endogenous Pfs230D13-14 in complex with Pfs48/45 bound to anti-Pfs48/45 Fabs RUPA-71 and RUPA-44
Method: single particle / : Hailemariam S, Heide F, Bekkering E, Ivanochko D, Yoo R, Julien JP

EMDB-48921:
Endogenous Pfs230D1-6 in complex with RUPA-97, LMIV230-01, and 2A2 Fab domains
Method: single particle / : Heide F, Yoo R, Ivanochko D, Hailemariam S, Bekkering E, Julien JP

EMDB-48924:
Endogenous Pfs230D9-14 in complex with Pfs48/45
Method: single particle / : Heide F, Ivanochko D, Bekkering E, Yoo R, Hailemariam S, Julien JP

EMDB-48941:
Endogenous Pfs230D7-8 in complex with 18F25
Method: single particle / : Jackman JJ, Yoo R, Ivanochko D, Hailemariam S, Bekkering E, Julien JP

PDB-9n5h:
Endogenous Pfs230D1-6 in complex with RUPA-97, LMIV230-01, and 2A2 Fab domains
Method: single particle / : Heide F, Yoo R, Ivanochko D, Hailemariam S, Bekkering E, Julien JP

PDB-9n5k:
Endogenous Pfs230D9-14 in complex with Pfs48/45
Method: single particle / : Heide F, Ivanochko D, Bekkering E, Yoo R, Hailemariam S, Julien JP

PDB-9n5o:
Endogenous Pfs230D7-8 in complex with 18F25
Method: single particle / : Jackman JJ, Yoo R, Ivanochko D, Hailemariam S, Bekkering E, Julien JP

EMDB-19777:
M. tuberculosis gyrase holocomplex with 150 bp DNA and gepotidacin
Method: single particle / : Mechaly A, Gubellini F, Yab E, Willand N, Petrella S, Dreneau A, Gioia B, Piveteau C, Djaout K, Lecat E, Wehenkel AM, Alzari PM, Deprez B, Baulard A, Aubry A

PDB-8s7k:
M. tuberculosis gyrase holocomplex with 150 bp DNA and gepotidacin
Method: single particle / : Mechaly A, Gubellini F, Yab E, Willand N, Petrella S

EMDB-53279:
Cryo_EM density map of human FAN1 in complex with CAG-2 loop DNA substrate and PCNA
Method: single particle / : Jeyasankar G, Thomsen M

EMDB-48093:
NCS.1 Fab in complex with N5 NA of A/shorebird/Delaware Bay/309/2016 (DB16, H10N5) -- 4 Fabs
Method: single particle / : Borst AJ

EMDB-48101:
NCS.1 Fab in complex with N5 NA of A/shorebird/Delaware Bay/309/2016 (DB16, H10N5) -- 3 Fabs
Method: single particle / : Borst AJ

EMDB-48102:
NCS.1.1 Fab in complex with the sNAp of A/California/04/2009 (CA09, H1N1) -- 4 Fabs [C4 Reconstruction]
Method: single particle / : Borst AJ

EMDB-70264:
NCS.1.1 Fab in complex with the sNAp of A/California/04/2009 (CA09, H1N1) -- 4 Fabs [C1 Reconstruction]
Method: single particle / : Borst AJ

PDB-9eit:
NCS.1 Fab in complex with N5 NA of A/shorebird/Delaware Bay/309/2016 (DB16, H10N5) -- 4 Fabs
Method: single particle / : Borst AJ

PDB-9eje:
NCS.1 Fab in complex with N5 NA of A/shorebird/Delaware Bay/309/2016 (DB16, H10N5) -- 3 Fabs
Method: single particle / : Borst AJ

PDB-9ejf:
NCS.1.1 Fab in complex with the sNAp of A/California/04/2009 (CA09, H1N1) -- 4 Fabs [C4 Reconstruction]
Method: single particle / : Borst AJ

Pages:

+
About EMN search

-
News

-
Feb 9, 2022. New format data for meta-information of EMDB entries

New format data for meta-information of EMDB entries

  • Version 3 of the EMDB header file is now the official format.
  • The previous official version 1.9 will be removed from the archive.

Related info.:EMDB header

External links:wwPDB to switch to version 3 of the EMDB data model

-
Oct 5, 2021. Nobel Prize for mechanically activated and temperature-gated ion channels

Nobel Prize for mechanically activated and temperature-gated ion channels

  • The Nobel Prize in Physiology or Medicine 2021 was awarded jointly to David Julius and Ardem Patapoutian "for their discoveries of receptors for temperature and touch."
  • EM Navigator can help to find cryo-EM structure data by both pioneers.

External links:The Nobel Prize in Physiology or Medicine 2021 - NobelPrize.org / Structure data by Ardem Patapoutian / Structure data by David Julius

+
Aug 12, 2020. Covid-19 info

Covid-19 info

URL: https://pdbj.org/emnavi/covid19.php

New page: Covid-19 featured information page in EM Navigator.

Related info.:Covid-19 info / Mar 5, 2020. Novel coronavirus structure data

+
Mar 5, 2020. Novel coronavirus structure data

Novel coronavirus structure data

Related info.:Yorodumi Speices / Aug 12, 2020. Covid-19 info

External links:COVID-19 featured content - PDBj / Molecule of the Month (242)：Coronavirus Proteases

+
Jul 5, 2019. Downlodablable text data

Downlodablable text data

Some data of EM Navigator services can be downloaded as text file. Software such as Excel can load the data files.

PageDataFormat
EMN Searchsearch resultCSV, TSV, or JSON
EMN statisticsdata tableCSV or TSV

Related info.:EMN Search / EMN Statistics

-
EMN Search

3DEM data search

Advanced data search for EMDB and EM data in PDB widh various search and display options

Related info.:EMDB / PDB / EM Navigator / Q: What are the data sources of EM Navigator? / Yorodumi Search / Jul 5, 2019. Downlodablable text data

Read more