[English] 日本語
- 3DEM data search -

-
Search query


Keywords
Database /
Q: What are the data sources of EM Navigator?
Data entries / weeks ago
Q: When the data are updated?
Author
Processing method
Display mode
Sort by
Num. of entries / page
Entry
Article
Sample
Experiment
Processing
Max number of data0 for all data
File format
  • CSV format (Comma-Separated Values, for Excel, etc.)
  • TSV format (Tab Separated Values, for Excel, etc.)
  • JSON format

Yorodumi Search

-
Search result

Showing 1 - 50 of 148 items for (author: jones & im)

EMDB-52330:
Cryo-EM structure of DDB1dB-CRBN-MRT-0031619, conformation 1
Method: single particle / : Langousis G, Hunkeler M, Chami M, Quan C, Townson S, Bonenfant D

EMDB-52331:
Cryo-EM structure of DDB1dB-CRBN-MRT-0031619, conformation 2
Method: single particle / : Langousis G, Hunkeler M, Chami M, Quan C, Townson S, Bonenfant D

PDB-9hpi:
Cryo-EM structure of DDB1dB-CRBN-MRT-0031619, conformation 1
Method: single particle / : Langousis G, Hunkeler M, Chami M, Quan C, Townson S, Bonenfant D

PDB-9hpj:
Cryo-EM structure of DDB1dB-CRBN-MRT-0031619, conformation 2
Method: single particle / : Langousis G, Hunkeler M, Chami M, Quan C, Townson S, Bonenfant D

EMDB-72209:
Focused cryo-EM map of DDB1dB:CRBN:mezigdomide:SALL4(392-449)
Method: single particle / : Park J, Hunkeler M, Roy Burman SS, Fishcer ES

EMDB-72215:
Focused cryo-EM map of DDB1dB:CRBN:mezigdomide:SALL4(392-449; G416A)
Method: single particle / : Park J, Hunkeler M, Roy Burman SS, Fischer ES

EMDB-44380:
Prefusion F glycoprotein ectodomain of Nipah virus ectodomain in complex with DS90 nanobody
Method: single particle / : Low YS, Isaacs A, Modhiran N, Watterson D

PDB-9b9e:
Prefusion F glycoprotein ectodomain of Nipah virus ectodomain in complex with DS90 nanobody
Method: single particle / : Low YS, Isaacs A, Modhiran N, Watterson D

EMDB-51378:
Structure of the human mitochondrial pyruvate carrier inhibited by a UK5099-derivative
Method: single particle / : Sichrovsky M, Lacabanne D, Ruprecht JJ, Rana JJ, Stanik K, Dionysopoulou M, Sowton AP, King MS, Jones S, Cooper L, Hardwick SW, Paris G, Chirgadze DY, Ding S, Fearnley IMF, Palmer S, Pardon E, Steyaert J, Leone V, Forrest LR, Tavoulari S, Kunji ERS

EMDB-51379:
Structure of the human mitochondrial pyruvate carrier inhibited by zaprinast
Method: single particle / : Sichrovsky M, Lacabanne D, Ruprecht JJ, Rana JJ, Stanik K, Dionysopoulou M, Sowton AP, King MS, Jones S, Cooper L, Hardwick SW, Paris G, Chirgadze DY, Ding S, Fearnley IM, Palmer S, Pardon E, Steyaert J, Leone V, Forrest LR, Tavoulari S, Kunji ERS

EMDB-51381:
Structure of the human mitochondrial pyruvate carrier inhibited by mitoglitazone
Method: single particle / : Sichrovsky M, Lacabanne D, Ruprecht JJ, Rana JJ, Stanik K, Dionysopoulou M, King MS, Sowton AP, Jones S, Cooper L, Hardwick SW, Paris G, Chirgadze DY, Ding S, Fearnley IM, Palmer S, Pardon E, Steyaert J, Leone V, Forrest LR, Tavoulari S, Kunji ERS

PDB-9giv:
Structure of the human mitochondrial pyruvate carrier inhibited by a UK5099-derivative
Method: single particle / : Sichrovsky M, Lacabanne D, Ruprecht JJ, Rana JJ, Stanik K, Dionysopoulou M, Sowton AP, King MS, Jones S, Cooper L, Hardwick SW, Paris G, Chirgadze DY, Ding S, Fearnley IMF, Palmer S, Pardon E, Steyaert J, Leone V, Forrest LR, Tavoulari S, Kunji ERS

PDB-9giw:
Structure of the human mitochondrial pyruvate carrier inhibited by zaprinast
Method: single particle / : Sichrovsky M, Lacabanne D, Ruprecht JJ, Rana JJ, Stanik K, Dionysopoulou M, Sowton AP, King MS, Jones S, Cooper L, Hardwick SW, Paris G, Chirgadze DY, Ding S, Fearnley IM, Palmer S, Pardon E, Steyaert J, Leone V, Forrest LR, Tavoulari S, Kunji ERS

PDB-9gix:
Structure of the human mitochondrial pyruvate carrier in the apo-state
Method: single particle / : Sichrovsky M, Lacabanne D, Ruprecht JJ, Rana JJ, Stanik K, Dionysopoulou M, Sowton AP, King MS, Jones S, Cooper L, Hardwick SW, Paris G, Chirgadze DY, Ding S, Fearnley IM, Palmer S, Pardon E, Steyaert J, Leone V, Forrest LR, Tavoulari S, Kunji ERS

PDB-9giy:
Structure of the human mitochondrial pyruvate carrier inhibited by mitoglitazone
Method: single particle / : Sichrovsky M, Lacabanne D, Ruprecht JJ, Rana JJ, Stanik K, Dionysopoulou M, King MS, Sowton AP, Jones S, Cooper L, Hardwick SW, Paris G, Chirgadze DY, Ding S, Fearnley IM, Palmer S, Pardon E, Steyaert J, Leone V, Forrest LR, Tavoulari S, Kunji ERS

EMDB-51326:
Structure of the G848S mutant of human mitochondrial DNA polymerase gamma in complex with PZL-A
Method: single particle / : Valenzuela S, Falkenberg M

EMDB-51327:
Structure of the G848S mutant of human mitochondrial DNA polymerase gamma
Method: single particle / : Valenzuela S, Falkenberg M

EMDB-51328:
Structure of the A467T mutant of human mitochondrial DNA polymerase gamma in complex with PZL-A
Method: single particle / : Valenzuela S, Falkenberg M

EMDB-51329:
Structure of the A467T mutant of human mitochondrial DNA polymerase gamma
Method: single particle / : Valenzuela S, Falkenberg M

EMDB-51330:
Structure of WT human mitochondrial DNA polymerase gamma
Method: single particle / : Valenzuela S, Falkenberg M

PDB-9ggb:
Structure of the G848S mutant of human mitochondrial DNA polymerase gamma in complex with PZL-A
Method: single particle / : Valenzuela S, Falkenberg M

PDB-9ggc:
Structure of the G848S mutant of human mitochondrial DNA polymerase gamma
Method: single particle / : Valenzuela S, Falkenberg M

PDB-9ggd:
Structure of the A467T mutant of human mitochondrial DNA polymerase gamma in complex with PZL-A
Method: single particle / : Valenzuela S, Falkenberg M

PDB-9gge:
Structure of the A467T mutant of human mitochondrial DNA polymerase gamma
Method: single particle / : Valenzuela S, Falkenberg M

PDB-9ggf:
Structure of WT human mitochondrial DNA polymerase gamma
Method: single particle / : Valenzuela S, Falkenberg M

EMDB-19627:
Cryo-EM structure of CAK modified by covalent inhibitor SY-1365
Method: single particle / : Feng J, Koh AF, Kotecha A, Greber BJ

EMDB-19628:
Cryo-EM structure of CAK in complex with SY-5609
Method: single particle / : Feng J, Cronin NB, Marineau JJ, Greber BJ

PDB-8s0r:
Cryo-EM structure of CAK modified by covalent inhibitor SY-1365
Method: single particle / : Feng J, Koh AF, Kotecha A, Greber BJ

PDB-8s0t:
Cryo-EM structure of CAK in complex with SY-5609
Method: single particle / : Feng J, Cronin NB, Marineau JJ, Greber BJ

EMDB-17678:
Helical reconstruction of CHIKV nsP3 helical scaffolds
Method: helical / : Reguera J, Hons M, Zimberger C, Ptchelkine D, Jones R, Desfosses A

EMDB-17729:
Helical reconstruction of CHIKV nsP3 helical scaffolds
Method: helical / : Reguera J, Hons M, Zimberger C, Ptchelkine D, Jones R, Desfosses A

PDB-8phz:
Helical reconstruction of CHIKV nsP3 helical scaffolds
Method: helical / : Reguera J, Hons M, Zimberger C, Ptchelkine D, Jones R, Desfosses A

PDB-8pk7:
Helical reconstruction of CHIKV nsP3 helical scaffolds
Method: helical / : Reguera J, Hons M, Zimberger C, Ptchelkine D, Jones R, Desfosses A

EMDB-17730:
masked refinement giving rise to better defined protruding densities of the potential macrodomain outside the AUD helical assemblies.
Method: helical / : Reguera J, Hons M, Zimberger C, Ptchelkine D, Jones R, Desfosses A

EMDB-17295:
Stabilised BA.1 SARS-CoV-2 spike with H6 nanobodies in '3 up' RBD conformation
Method: single particle / : Weckener M, Naismith JH, Owens RJ

PDB-8oyt:
Stabilised BA.1 SARS-CoV-2 spike with H6 nanobodies in '3 up' RBD conformation
Method: single particle / : Weckener M, Naismith JH, Owens RJ

EMDB-17296:
Stabilised BA.1 SARS-CoV-2 spike with H6 nanobodies in '2 up 1 down' RBD conformation
Method: single particle / : Weckener M, Naismith JH, Owens RJ

PDB-8oyu:
Stabilised BA.1 SARS-CoV-2 spike with H6 nanobodies in '2 up 1 down' RBD conformation
Method: single particle / : Weckener M, Naismith JH, Owens RJ

EMDB-19406:
Structure of the human DDB1-DDA1-DCAF15 E3 ubiquitin ligase bound to compound furan 12
Method: single particle / : Shilliday F, Lucas SCC, Richter M, Michaelides IN, Fusani L

EMDB-19407:
Structure of the human DDB1-DDA1-DCAF15 E3 ubiquitin ligase bound to compound furan 24
Method: single particle / : Shilliday F, Lucas SCC, Richter M, Michaelides IN, Fusani L

PDB-8rox:
Structure of the human DDB1-DDA1-DCAF15 E3 ubiquitin ligase bound to compound furan 12
Method: single particle / : Shilliday F, Lucas SCC, Richter M, Michaelides IN, Fusani L

PDB-8roy:
Structure of the human DDB1-DDA1-DCAF15 E3 ubiquitin ligase bound to compound furan 24
Method: single particle / : Shilliday F, Lucas SCC, Richter M, Michaelides IN, Fusani L

EMDB-16005:
GABA-A receptor a5 homomer - a5V3 - APO
Method: single particle / : Miller PS, Malinauskas TM, Hardwick SW, Chirgadze DY

EMDB-16050:
GABA-A receptor a5 homomer - a5V3 - Basmisanil - HR
Method: single particle / : Malinauskas TM, Wahid AA, Hardwick SW, Chirgadze DY, Miller PS

EMDB-16051:
GABA-A receptor a5 homomer - a5V3 - RO154513
Method: single particle / : Miller PS, Malinauskas TM, Hardwick SW, Chirgadze DY, Wahid AA

EMDB-16055:
GABA-A receptor a5 homomer - a5V3 - RO5211223
Method: single particle / : Miller PS, Malinauskas TM, Hardwick SW, Chirgadze DY

EMDB-16058:
GABA-A receptor a5 homomer - a5V3 - Diazepam
Method: single particle / : Miller PS, Malinauskas TM, Kasaragod VB, Chirgadze DY

EMDB-16060:
GABA-A receptor a5 homomer - a5V3 - DMCM
Method: single particle / : Miller PS, Malinauskas TM, Hardwick SW, Chirgadze DY

EMDB-16063:
GABA-A receptor a5 homomer - a5V3 - L655708
Method: single particle / : Miller PS, Malinauskas TM, Hardwick SW, Chirgadze DY

Pages:

+
About EMN search

-
News

-
Feb 9, 2022. New format data for meta-information of EMDB entries

New format data for meta-information of EMDB entries

  • Version 3 of the EMDB header file is now the official format.
  • The previous official version 1.9 will be removed from the archive.

Related info.:EMDB header

External links:wwPDB to switch to version 3 of the EMDB data model

-
Oct 5, 2021. Nobel Prize for mechanically activated and temperature-gated ion channels

Nobel Prize for mechanically activated and temperature-gated ion channels

  • The Nobel Prize in Physiology or Medicine 2021 was awarded jointly to David Julius and Ardem Patapoutian "for their discoveries of receptors for temperature and touch."
  • EM Navigator can help to find cryo-EM structure data by both pioneers.

External links:The Nobel Prize in Physiology or Medicine 2021 - NobelPrize.org / Structure data by Ardem Patapoutian / Structure data by David Julius

+
Aug 12, 2020. Covid-19 info

Covid-19 info

URL: https://pdbjlvh1.pdbj.org/emnavi/covid19.php

New page: Covid-19 featured information page in EM Navigator.

Related info.:Covid-19 info / Mar 5, 2020. Novel coronavirus structure data

+
Mar 5, 2020. Novel coronavirus structure data

Novel coronavirus structure data

Related info.:Yorodumi Speices / Aug 12, 2020. Covid-19 info

External links:COVID-19 featured content - PDBj / Molecule of the Month (242):Coronavirus Proteases

+
Jul 5, 2019. Downlodablable text data

Downlodablable text data

Some data of EM Navigator services can be downloaded as text file. Software such as Excel can load the data files.

PageDataFormat
EMN Searchsearch resultCSV, TSV, or JSON
EMN statisticsdata tableCSV or TSV

Related info.:EMN Search / EMN Statistics

-
EMN Search

3DEM data search

Advanced data search for EMDB and EM data in PDB widh various search and display options

Related info.:EMDB / PDB / EM Navigator / Q: What are the data sources of EM Navigator? / Yorodumi Search / Jul 5, 2019. Downlodablable text data

Read more