[English] 日本語
EMN search
- 3DEM data search -

-
Search query


Keywords
Database /
Q: What are the data sources of EM Navigator?
Data entries / weeks ago
Q: When the data are updated?
Author
Processing method
Display mode
Sort by
Num. of entries / page
Entry
Article
Sample
Experiment
Processing
Max number of data0 for all data
File format
  • CSV format (Comma-Separated Values, for Excel, etc.)
  • TSV format (Tab Separated Values, for Excel, etc.)
  • JSON format

Yorodumi Search

-
Search result

Showing 1 - 50 of 537 items for (author: johnson & ri)

EMDB-43200:
CryoEM structure of tryptase in complex with wild type anti-tryptase Fab E104.v1
Method: single particle / : Kung JE, Johnson MC, Sudhamsu J

EMDB-43201:
CryoEM structure of tryptase in complex with engineered conformationally rigid anti-tryptase Fab E104.v1.2DS
Method: single particle / : Kung JE, Johnson MC, Sudhamsu J

EMDB-43202:
CryoEM structure of tryptase in complex with engineered conformationally rigid anti-tryptase Fab E104.v1.4DS
Method: single particle / : Kung JE, Johnson MC, Sudhamsu J

EMDB-43203:
CryoEM structure of tryptase in complex with engineered conformationally rigid anti-tryptase Fab E104.v1.6DS
Method: single particle / : Kung JE, Johnson MC, Sudhamsu J

EMDB-43204:
Composite cryoEM map of Nav1.7 in complex with wild type Fab 7A9
Method: single particle / : Kung JE, Jao CC, Arthur CP, Sudhamsu J

EMDB-43205:
Consensus cryoEM map of Nav1.7 in complex with wild type Fab 7A9
Method: single particle / : Kung JE, Jao CC, Arthur CP, Sudhamsu J

EMDB-43206:
Constituent EM map: Focused refinement of Fab 7A9 in complex of Nav1.7 and Fab 7A9
Method: single particle / : Kung JE, Jao CC, Arthur CP, Sudhamsu J

EMDB-43207:
Constituent map: Focused refinement of Nav1.7 in complex of Nav1.7 and Fab 7A9
Method: single particle / : Kung JE, Jao CC, Arthur CP, Sudhamsu J

EMDB-43208:
Composite cryoEM map of Nav1.7 in complex with engineered conformationally rigid Fab 7A9.4DS
Method: single particle / : Kung JE, Jao CC, Arthur CP, Sudhamsu J

EMDB-43209:
Consensus cryoEM map of Nav1.7 in complex with engineered conformationally rigid Fab 7A9.4DS
Method: single particle / : Kung JE, Jao CC, Arthur CP, Sudhamsu J

EMDB-43210:
Constituent map: Focused refinement of Fab 7A9.4DS in complex of Nav1.7 and Fab 7A9.4DS
Method: single particle / : Kung JE, Jao CC, Arthur CP, Sudhamsu J

EMDB-43211:
Constituent map: Focused refinement of Nav1.7 in complex of Nav1.7 and Fab 7A9.4DS
Method: single particle / : Kung JE, Jao CC, Arthur CP, Sudhamsu J

EMDB-43220:
CryoEM structure of Angiopoietin-2 in complex with engineered conformationally rigid Fab 5A12.6DS
Method: single particle / : Kung JE, Sudhamsu J

EMDB-43221:
CryoEM structure of GNE-1952-alkylated KRAS G12C in complex with engineered conformationally rigid Fab 2H11.4DS
Method: single particle / : Kung JE, Sudhamsu J

PDB-8vgh:
CryoEM structure of tryptase in complex with wild type anti-tryptase Fab E104.v1
Method: single particle / : Kung JE, Johnson MC, Sudhamsu J

PDB-8vgi:
CryoEM structure of tryptase in complex with engineered conformationally rigid anti-tryptase Fab E104.v1.2DS
Method: single particle / : Kung JE, Johnson MC, Sudhamsu J

PDB-8vgj:
CryoEM structure of tryptase in complex with engineered conformationally rigid anti-tryptase Fab E104.v1.4DS
Method: single particle / : Kung JE, Johnson MC, Sudhamsu J

PDB-8vgk:
CryoEM structure of tryptase in complex with engineered conformationally rigid anti-tryptase Fab E104.v1.6DS
Method: single particle / : Kung JE, Johnson MC, Sudhamsu J

PDB-8vgl:
CryoEM structure of Nav1.7 in complex with wild type Fab 7A9
Method: single particle / : Kung JE, Jao CC, Arthur CP, Sudhamsu J

PDB-8vgm:
CryoEM structure of Nav1.7 in complex with engineered conformationally rigid Fab 7A9.4DS
Method: single particle / : Kung JE, Jao CC, Arthur CP, Sudhamsu J

PDB-8vgp:
CryoEM structure of Angiopoietin-2 in complex with engineered conformationally rigid Fab 5A12.6DS
Method: single particle / : Kung JE, Sudhamsu J

PDB-8vgq:
CryoEM structure of GNE-1952-alkylated KRAS G12C in complex with engineered conformationally rigid Fab 2H11.4DS
Method: single particle / : Kung JE, Sudhamsu J

EMDB-43667:
Soluble ectodomain of human cytomegalovirus (HCMV) glycoprotein B (gB) in the postfusion conformation in complex with 1G2 and 7H3 Fabs
Method: single particle / : Sponholtz MR, Byrne PO, McLellan JS

EMDB-43670:
Soluble ectodomain of human cytomegalovirus (HCMV) glycoprotein B (gB) stabilized in a prefusion-like conformation in complex with 1G2 and 7H3, global refinement
Method: single particle / : Sponholtz MR, Byrne PO, McLellan JS

EMDB-43671:
Soluble ectodomain of human cytomegalovirus (HCMV) glycoprotein B (gB) stabilized in a prefusion-like conformation in complex with 1G2 and 7H3, local refinement
Method: single particle / : Sponholtz MR, Byrne PO, McLellan JS

EMDB-43672:
Soluble ectodomain of human cytomegalovirus (HCMV) glycoprotein B (gB) stabilized in a prefusion-like conformation in complex with 1G2 and 7H3, composite map (global and local) and model
Method: single particle / : Sponholtz MR, Byrne PO, McLellan JS

PDB-8vym:
Soluble ectodomain of human cytomegalovirus (HCMV) glycoprotein B (gB) in the postfusion conformation in complex with 1G2 and 7H3 Fabs
Method: single particle / : Sponholtz MR, Byrne PO, McLellan JS

PDB-8vyn:
Soluble ectodomain of human cytomegalovirus (HCMV) glycoprotein B (gB) stabilized in a prefusion-like conformation in complex with 1G2 and 7H3, composite map (global and local) and model
Method: single particle / : Sponholtz MR, Byrne PO, McLellan JS

EMDB-42578:
Subtomogram average of the Metallosphaera javensis AS-7 Surface layer
Method: subtomogram averaging / : Ghosal D, Johnson MD, Shepherd DC

EMDB-42579:
Subtomogram average of the the Metallosphaera javensis AS-7 primed nanotube
Method: subtomogram averaging / : Ghosal D, Johnson MD, Shepherd D

EMDB-44765:
Human DNA polymerase theta helicase domain in complex with inhibitor AB25583, dimer form
Method: single particle / : Ito F, Li Z, Chen XS

EMDB-44766:
Human DNA polymerase theta helicase domain in complex with inhibitor AB25583, tetramer form
Method: single particle / : Ito F, Li Z, Chen XS

PDB-9bp9:
Human DNA polymerase theta helicase domain in complex with inhibitor AB25583, dimer form
Method: single particle / : Ito F, Li Z, Chen XS

PDB-9bpa:
Human DNA polymerase theta helicase domain in complex with inhibitor AB25583, tetramer form
Method: single particle / : Ito F, Li Z, Chen XS

EMDB-45078:
E.coli GroEL + PBZ1587 inhibitor
Method: single particle / : Watson ER, Lander GC

EMDB-45079:
E.coli GroEL apoenzyme
Method: single particle / : Watson ER, Lander GC

EMDB-45080:
E.Faecium GroEL
Method: single particle / : Watson ER, Lander GC

EMDB-45098:
E.coli GroEL + PBZ1587 inhibitor C1 reconstruction
Method: single particle / : Watson ER, Lander GC

PDB-9c0b:
E.coli GroEL + PBZ1587 inhibitor
Method: single particle / : Watson ER, Lander GC

PDB-9c0c:
E.coli GroEL apoenzyme
Method: single particle / : Watson ER, Lander GC

PDB-9c0d:
E.Faecium GroEL
Method: single particle / : Watson ER, Lander GC

EMDB-43139:
SARS-CoV-2 Spike S2 bound to Fab 54043-5
Method: single particle / : Johnson NV, McLellan JS

PDB-8vcr:
SARS-CoV-2 Spike S2 bound to Fab 54043-5
Method: single particle / : Johnson NV, McLellan JS

EMDB-42981:
Prefusion-stabilized Respirovirus type 3 Fusion protein
Method: single particle / : Johnson NV, McLellan JS

PDB-8v5a:
Prefusion-stabilized Respirovirus type 3 Fusion protein
Method: single particle / : Johnson NV, McLellan JS

EMDB-40208:
Backbone model of de novo-designed chlorophyll-binding nanocage O32-15
Method: single particle / : Redler RL, Ennist NM, Wang S, Baker D, Ekiert DC, Bhabha G

EMDB-40209:
Chlorophyll-binding region of de novo-designed nanocage O32-15
Method: single particle / : Redler RL, Ennist NM, Wang S, Baker D, Ekiert DC, Bhabha G

PDB-8glt:
Backbone model of de novo-designed chlorophyll-binding nanocage O32-15
Method: single particle / : Redler RL, Ennist NM, Wang S, Baker D, Ekiert DC, Bhabha G

EMDB-42478:
Trehalose Synthase (TreS) of Mycobacterium tuberculosis in complex with 6-TreAz compound
Method: single particle / : Pathirage R, Ronning DR

PDB-8uqv:
Trehalose Synthase (TreS) of Mycobacterium tuberculosis in complex with 6-TreAz compound
Method: single particle / : Pathirage R, Ronning DR

Pages:

+
About EMN search

-
News

-
Feb 9, 2022. New format data for meta-information of EMDB entries

New format data for meta-information of EMDB entries

  • Version 3 of the EMDB header file is now the official format.
  • The previous official version 1.9 will be removed from the archive.

Related info.:EMDB header

External links:wwPDB to switch to version 3 of the EMDB data model

-
Oct 5, 2021. Nobel Prize for mechanically activated and temperature-gated ion channels

Nobel Prize for mechanically activated and temperature-gated ion channels

  • The Nobel Prize in Physiology or Medicine 2021 was awarded jointly to David Julius and Ardem Patapoutian "for their discoveries of receptors for temperature and touch."
  • EM Navigator can help to find cryo-EM structure data by both pioneers.

External links:The Nobel Prize in Physiology or Medicine 2021 - NobelPrize.org / Structure data by Ardem Patapoutian / Structure data by David Julius

+
Aug 12, 2020. Covid-19 info

Covid-19 info

URL: https://pdbj.org/emnavi/covid19.php

New page: Covid-19 featured information page in EM Navigator.

Related info.:Covid-19 info / Mar 5, 2020. Novel coronavirus structure data

+
Mar 5, 2020. Novel coronavirus structure data

Novel coronavirus structure data

Related info.:Yorodumi Speices / Aug 12, 2020. Covid-19 info

External links:COVID-19 featured content - PDBj / Molecule of the Month (242):Coronavirus Proteases

+
Jul 5, 2019. Downlodablable text data

Downlodablable text data

Some data of EM Navigator services can be downloaded as text file. Software such as Excel can load the data files.

PageDataFormat
EMN Searchsearch resultCSV, TSV, or JSON
EMN statisticsdata tableCSV or TSV

Related info.:EMN Search / EMN Statistics

-
EMN Search

3DEM data search

Advanced data search for EMDB and EM data in PDB widh various search and display options

Related info.:EMDB / PDB / EM Navigator / Q: What are the data sources of EM Navigator? / Yorodumi Search / Jul 5, 2019. Downlodablable text data

Read more