[English] 日本語
- 3DEM data search -

-
Search query


Keywords
Database /
Q: What are the data sources of EM Navigator?
Data entries / weeks ago
Q: When the data are updated?
Author
Processing method
Display mode
Sort by
Num. of entries / page
Entry
Article
Sample
Experiment
Processing
Max number of data0 for all data
File format
  • CSV format (Comma-Separated Values, for Excel, etc.)
  • TSV format (Tab Separated Values, for Excel, etc.)
  • JSON format

Yorodumi Search

-
Search result

Showing 1 - 50 of 3,639 items for (author: jing & x)

EMDB-63398:
Cryo-EM structure of Arabidopsis thaliana RGA in complex with GID1A
Method: single particle / : Islam S, Park K, Kwon E, Kim DY

EMDB-63399:
Cryo-EM structure of Arabidopsis thaliana RGA in complex with GID1A, SLY1, and ASK2 (consensus map)
Method: single particle / : Islam S, Park K, Kwon E, Kim DY

EMDB-63400:
Cryo-EM structure of Arabidopsis thaliana RGA in complex with GID1A, SLY1, and ASK2 (focused map)
Method: single particle / : Islam S, Park K, Kwon E, Kim DY

EMDB-63401:
Cryo-EM structure of Arabidopsis thaliana RGA in complex with GID1A, SLY1, and ASK2 (composite map)
Method: single particle / : Islam S, Park K, Kwon E, Kim DY

PDB-9lum:
Cryo-EM structure of Arabidopsis thaliana RGA in complex with GID1A
Method: single particle / : Islam S, Park K, Kwon E, Kim DY

PDB-9lun:
Cryo-EM structure of Arabidopsis thaliana RGA in complex with GID1A, SLY1, and ASK2 (consensus map)
Method: single particle / : Islam S, Park K, Kwon E, Kim DY

PDB-9luo:
Cryo-EM structure of Arabidopsis thaliana RGA in complex with GID1A, SLY1, and ASK2 (focused map)
Method: single particle / : Islam S, Park K, Kwon E, Kim DY

PDB-9lup:
Cryo-EM structure of Arabidopsis thaliana RGA in complex with GID1A, SLY1, and ASK2 (composite map)
Method: single particle / : Islam S, Park K, Kwon E, Kim DY

EMDB-63235:
An antibody target the fusion protein of Nipah virus
Method: single particle / : Xu H, Su XD

PDB-9lng:
An antibody target the fusion protein of Nipah virus
Method: single particle / : Xu H, Su XD

EMDB-62410:
Cryo-EM structure of ChCas12b-sgRNA-target DNA ternary complex (Complex-A)
Method: single particle / : Li Y, Li J, Pei X, Gan J, Lin J

EMDB-62411:
Cryo-EM structure of ChCas12b-sgRNA-extended non-target DNA ternary complex (Complex-B)
Method: single particle / : Li Y, Li J, Pei X, Gan J, Lin J

EMDB-62412:
Cryo-EM structure of ChCas12b-sgRNA-extended non-target DNA ternary complex (Complex-C)
Method: single particle / : Li Y, Li J, Pei X, Gan J, Lin J

EMDB-62413:
Cryo-EM structure of ChCas12b-sgRNA-extended non-target DNA ternary complex (Complex-D)
Method: single particle / : Li Y, Li J, Pei X, Gan J, Lin J

PDB-9kln:
Cryo-EM structure of ChCas12b-sgRNA-target DNA ternary complex (Complex-A)
Method: single particle / : Li Y, Li J, Pei X, Gan J, Lin J

PDB-9klo:
Cryo-EM structure of ChCas12b-sgRNA-extended non-target DNA ternary complex (Complex-B)
Method: single particle / : Li Y, Li J, Pei X, Gan J, Lin J

PDB-9klp:
Cryo-EM structure of ChCas12b-sgRNA-extended non-target DNA ternary complex (Complex-C)
Method: single particle / : Li Y, Li J, Pei X, Gan J, Lin J

PDB-9klq:
Cryo-EM structure of ChCas12b-sgRNA-extended non-target DNA ternary complex (Complex-D)
Method: single particle / : Li Y, Li J, Pei X, Gan J, Lin J

EMDB-62131:
Cryo-EM Structure of hAGO2D669A-siRNA-target (12-nt)
Method: single particle / : Li ZZ, Xu QK, Wu JP, Shen EZ

EMDB-62132:
Cryo-EM Structure of hAGO2D669A-siRNA-target (14-nt, bilobed)
Method: single particle / : Li ZZ, Xu QK, Wu JP, Shen EZ

EMDB-62133:
Cryo-EM Structure of hAGO2D669A-siRNA-target (14-nt, uni-lobed)
Method: single particle / : Li ZZ, Xu QK, Wu JP, Shen EZ

EMDB-62134:
Cryo-EM Structure of hAGO2D669A-siRNA-target (19-nt)
Method: single particle / : Li ZZ, Xu QK, Wu JP, Shen EZ

EMDB-62135:
Cryo-EM Structure of hAGO2D669A-siRNA-target (21-nt)
Method: single particle / : Li ZZ, Xu QK, Wu JP, Shen EZ

PDB-9k6p:
Cryo-EM Structure of hAGO2D669A-siRNA-target (12-nt)
Method: single particle / : Li ZZ, Xu QK, Wu JP, Shen EZ

PDB-9k6q:
"Cryo-EM Structure of hAGO2D669A-siRNA-target (14-nt, sesqui-lobed)
Method: single particle / : Li ZZ, Xu QK, Wu JP, Shen EZ

PDB-9k6r:
Cryo-EM Structure of hAGO2D669A-siRNA-target (14-nt, uni-lobed)
Method: single particle / : Li ZZ, Xu QK, Wu JP, Shen EZ

PDB-9k6s:
Cryo-EM Structure of hAGO2D669A-siRNA-target (19-nt)
Method: single particle / : Li ZZ, Xu QK, Wu JP, Shen EZ

PDB-9k6t:
Cryo-EM Structure of hAGO2D669A-siRNA-target (21-nt)
Method: single particle / : Li ZZ, Xu QK, Wu JP, Shen EZ

EMDB-61724:
Cryo-EM structure of BTN2A1 in complex with antagonist antibody TH002
Method: single particle / : Zhang M, Wang YQ, Xiao JY

EMDB-61732:
Cryo-EM structure of the HMBPP-primed BTN3A1-BTN3A2-BTN2A1 in complex with agonist antibody TH001
Method: single particle / : Zhang M, Wang YQ, Xiao JY

EMDB-61733:
Extracellular region of the HMBPP-primed BTN3A1-BTN3A2-BTN2A1 complex (EMReady)
Method: single particle / : Zhang M, Wang YQ, Xiao JY

EMDB-61734:
TM/JM/B30.2 regions of the HMBPP-primed BTN3A1-BTN3A2-BTN2A1 complex (EMReady)
Method: single particle / : Zhang M, Wang YQ, Xiao JY

EMDB-61735:
Raw consensus map of the HMBPP-primed BTN3A1-BTN3A2-BTN2A1 complex
Method: single particle / : Zhang M, Wang YQ, Xiao JY

EMDB-61736:
Cryo-EM structure of the HMBPP-primed BTN3A1-BTN3A2-BTN2A1 complex
Method: single particle / : Zhang M, Wang YQ, Xiao JY

EMDB-61737:
Extracellular region of the Vgamma9Vdelta2 TCR-engaged BTN3A1-BTN3A2-BTN2A1 complex (EMReady)
Method: single particle / : Zhang M, Wang YQ, Xiao JY

EMDB-61738:
TM/JM/B30.2 regions of the Vgamma9Vdelta2 TCR-engaged BTN3A1-BTN3A2-BTN2A1 complex (EMReady)
Method: single particle / : Zhang M, Wang YQ, Xiao JY

EMDB-61739:
Raw consensus map of the Vgamma9Vdelta2 TCR-engaged BTN3A1-BTN3A2-BTN2A1 complex
Method: single particle / : Zhang M, Wang YQ, Xiao JY

EMDB-61740:
Cryo-EM structure of the Vgamma9Vdelta2 TCR-engaged BTN3A1-BTN3A2-BTN2A1 complex
Method: single particle / : Zhang M, Wang YQ, Xiao JY

PDB-9jq6:
Cryo-EM structure of BTN2A1 in complex with antagonist antibody TH002
Method: single particle / : Zhang M, Wang YQ, Xiao JY

PDB-9jqp:
Cryo-EM structure of the HMBPP-primed BTN3A1-BTN3A2-BTN2A1 in complex with agonist antibody TH001
Method: single particle / : Zhang M, Wang YQ, Xiao JY

PDB-9jqq:
Cryo-EM structure of the HMBPP-primed BTN3A1-BTN3A2-BTN2A1 complex
Method: single particle / : Zhang M, Wang YQ, Xiao JY

PDB-9jqr:
Cryo-EM structure of the Vgamma9Vdelta2 TCR-engaged BTN3A1-BTN3A2-BTN2A1 complex
Method: single particle / : Zhang M, Wang YQ, Xiao JY

EMDB-46902:
Cryo-EM structure of alpha5beta1 integrin in complex with NeoNectin precursor 5.3
Method: single particle / : Werther R, Nguyen A, Estrada Alamo KA, Wang X, Campbell MG

EMDB-47968:
Cryo-EM structure of alpha5beta1 integrin in complex with NeoNectin candidate 2, open conformation
Method: single particle / : Werther R, Nguyen A, Estrada Alamo KA, Wang X, Campbell MG

PDB-9dia:
Cryo-EM structure of alpha5beta1 integrin in complex with NeoNectin candidate 2
Method: single particle / : Werther R, Nguyen A, Estrada Alamo KA, Wang X, Campbell MG

PDB-9ef2:
Cryo-EM structure of alpha5beta1 integrin in complex with NeoNectin candidate 2, open conformation
Method: single particle / : Werther R, Nguyen A, Estrada Alamo KA, Wang X, Campbell MG

EMDB-63322:
Local reconstruction of bovine adenovirus type 3 capsid
Method: single particle / : Xiao H, Liu HR

EMDB-63323:
Structure of bovine adenovirus type 3 capsid
Method: single particle / : Xiao H, Liu HR

PDB-9lr9:
Local reconstruction of bovine adenovirus type 3 capsid
Method: single particle / : Xiao H, Liu HR

EMDB-60513:
Cryo-EM strcuture of Prostaglandin D2 Receptor DP1 activated by BW245C
Method: single particle / : Xu J, Xu Y, Wu C, Xu HE

Pages:

+
About EMN search

-
News

-
Feb 9, 2022. New format data for meta-information of EMDB entries

New format data for meta-information of EMDB entries

  • Version 3 of the EMDB header file is now the official format.
  • The previous official version 1.9 will be removed from the archive.

Related info.:EMDB header

External links:wwPDB to switch to version 3 of the EMDB data model

-
Oct 5, 2021. Nobel Prize for mechanically activated and temperature-gated ion channels

Nobel Prize for mechanically activated and temperature-gated ion channels

  • The Nobel Prize in Physiology or Medicine 2021 was awarded jointly to David Julius and Ardem Patapoutian "for their discoveries of receptors for temperature and touch."
  • EM Navigator can help to find cryo-EM structure data by both pioneers.

External links:The Nobel Prize in Physiology or Medicine 2021 - NobelPrize.org / Structure data by Ardem Patapoutian / Structure data by David Julius

+
Aug 12, 2020. Covid-19 info

Covid-19 info

URL: https://pdbj.org/emnavi/covid19.php

New page: Covid-19 featured information page in EM Navigator.

Related info.:Covid-19 info / Mar 5, 2020. Novel coronavirus structure data

+
Mar 5, 2020. Novel coronavirus structure data

Novel coronavirus structure data

Related info.:Yorodumi Speices / Aug 12, 2020. Covid-19 info

External links:COVID-19 featured content - PDBj / Molecule of the Month (242)：Coronavirus Proteases

+
Jul 5, 2019. Downlodablable text data

Downlodablable text data

Some data of EM Navigator services can be downloaded as text file. Software such as Excel can load the data files.

PageDataFormat
EMN Searchsearch resultCSV, TSV, or JSON
EMN statisticsdata tableCSV or TSV

Related info.:EMN Search / EMN Statistics

-
EMN Search

3DEM data search

Advanced data search for EMDB and EM data in PDB widh various search and display options

Related info.:EMDB / PDB / EM Navigator / Q: What are the data sources of EM Navigator? / Yorodumi Search / Jul 5, 2019. Downlodablable text data

Read more