[English] 日本語
- 3DEM data search -

-
Search query


Keywords
Database /
Q: What are the data sources of EM Navigator?
Data entries / weeks ago
Q: When the data are updated?
Author
Processing method
Display mode
Sort by
Num. of entries / page
Entry
Article
Sample
Experiment
Processing
Max number of data0 for all data
File format
  • CSV format (Comma-Separated Values, for Excel, etc.)
  • TSV format (Tab Separated Values, for Excel, etc.)
  • JSON format

Yorodumi Search

-
Search result

Showing 1 - 50 of 25,664 items for (author: hu & b)

EMDB-69160:
YghJ protein zymogen-like autoinhibited state
Method: single particle / : Gu JK, Zhang MH

EMDB-69161:
N-His tagged YghJ protein substrate-accessible state
Method: single particle / : Gu JK, Zhang MH

EMDB-69162:
C-His tagged YghJ protein substrate-accessible state
Method: single particle / : Gu JK, Zhang MH

PDB-23px:
YghJ protein zymogen-like autoinhibited state
Method: single particle / : Gu JK, Zhang MH

PDB-23py:
N-His tagged YghJ protein substrate-accessible state
Method: single particle / : Gu JK, Zhang MH

PDB-23pz:
C-His tagged YghJ protein substrate-accessible state
Method: single particle / : Gu JK, Zhang MH

EMDB-73556:
the structure of ERMA complex with ATPrS and Mg++
Method: single particle / : Shi N, Jiang Y

EMDB-73630:
the structure of ERMA Mg2+ bound form
Method: single particle / : Shi N, Jiang Y

PDB-9ywq:
the structure of ERMA complex with ATPrS and Mg++
Method: single particle / : Shi N, Jiang Y

PDB-9yyd:
the structure of ERMA Mg2+ bound form
Method: single particle / : Shi N, Jiang Y

EMDB-55893:
Drebrin actin binding domain 1 conformation A (ABD1a) bound to F-actin
Method: single particle / : Zhao W, Abis G, Oozeer F, Mulvaney T, Nagar N, Topf M, Gordon-Weeks PR, Conte MR, Atherton J

EMDB-55894:
Drebrin actin binding domain 1 conformation B (ABD1b) bound to F-actin
Method: single particle / : Zhao W, Abis G, Oozeer F, Mulvaney T, Nagar N, Topf M, Gordon-Weeks PR, Conte MR, Atherton J

EMDB-55895:
Drebrin actin binding domain 2 bound to F-actin
Method: single particle / : Zhao W, Abis G, Oozeer F, Mulvaney T, Nagar N, Topf M, Gordon-Weeks PR, Conte MR, Atherton J

PDB-9tg8:
Drebrin actin binding domain 1 conformation A (ABD1a) bound to F-actin
Method: single particle / : Zhao W, Abis G, Oozeer F, Mulvaney T, Nagar N, Topf M, Gordon-Weeks PR, Conte MR, Atherton J

PDB-9tg9:
Drebrin actin binding domain 1 conformation B (ABD1b) bound to F-actin
Method: single particle / : Zhao W, Abis G, Oozeer F, Mulvaney T, Nagar N, Topf M, Gordon-Weeks PR, Conte MR, Atherton J

PDB-9tga:
Drebrin actin binding domain 2 bound to F-actin
Method: single particle / : Zhao W, Abis G, Oozeer F, Mulvaney T, Nagar N, Topf M, Gordon-Weeks PR, Conte MR, Atherton J

EMDB-66141:
Cryo-EM structure of the insect sex pheromone receptor ApisOR22-Orco heterocomplex
Method: single particle / : Dong Z, Wang YD, Guan ZY, Wang GR, Yin P

EMDB-66142:
Cryo-EM structure of the insect sex pheromone receptor ApisOR22-Orco heterocomplex bound with nepetalactone in the open state
Method: single particle / : Dong Z, Guan ZY, Wang GR, Yin P

PDB-9wpf:
Cryo-EM structure of the insect sex pheromone receptor ApisOR22-Orco heterocomplex
Method: single particle / : Dong Z, Wang YD, Guan ZY, Wang GR, Yin P

PDB-9wpg:
Cryo-EM structure of the insect sex pheromone receptor ApisOR22-Orco heterocomplex bound with nepetalactone in the open state
Method: single particle / : Dong Z, Guan ZY, Wang GR, Yin P

EMDB-66968:
The focused structure of the N-terminal lobe of the human UBR4
Method: single particle / : Hu Z, Yan R

EMDB-67233:
The focused structure of the C-terminal lobe of the human UBR4-KCMF1-Calmodulin complex
Method: single particle / : Hu Z, Yan R

PDB-9xkl:
The focused structure of the N-terminal lobe of the human UBR4
Method: single particle / : Hu Z, Yan R

PDB-9xti:
The focused structure of the C-terminal lobe of the human UBR4-KCMF1-Calmodulin complex
Method: single particle / : Hu Z, Yan R

EMDB-75232:
Cryo-EM structure of a chemically treated Cyanobacterial Photosystem I core with bound platinum nanoparticles
Method: single particle / : Emerson MD, Gisriel CJ

PDB-10kf:
Cryo-EM structure of a chemically treated Cyanobacterial Photosystem I core with bound platinum nanoparticles
Method: single particle / : Emerson MD, Gisriel CJ

EMDB-66671:
Local refinement of SARS-CoV-2 KP.3.1.1 RBD with BD57-2704 and AB2-122 Fab
Method: single particle / : Cao YL, Wang YX

PDB-9x9t:
Local refinement of SARS-CoV-2 KP.3.1.1 RBD with BD57-2704 and AB2-122 Fab
Method: single particle / : Cao YL, Wang YX

EMDB-75687:
Rabbit 60S ribosomal subunit with eEF2 domain IV closed
Method: single particle / : Seraj Z, Zottig X, Huang CH, Loveland AB, Diggs S, Sholi E, Grigorieff N, Korostelev AA

EMDB-75689:
Rabbit 80S with eEF2,CCDC124,and LARP1,40S-head-swiveled
Method: single particle / : Seraj Z, Zottig X, Huang CH, Loveland AB, Diggs S, Sholi E, Grigorieff N, Korostelev AA

EMDB-75704:
Rabbit 60S ribosomal subunit with eEF2 domain IV open
Method: single particle / : Seraj Z, Zottig X, Huang CH, Loveland AB, Diggs S, Sholi E, Grigorieff N, Korostelev AA

EMDB-75724:
Rabbit 80S with eEF2,eIF5A and SERBP1
Method: single particle / : Seraj Z, Zottig X, Huang CH, Loveland AB, Diggs S, Sholi E, Grigorieff N, Korostelev AA

EMDB-75740:
Rabbit 80S with eEF2,IFRD2 and LARP1,40S-head-swiveled
Method: single particle / : Seraj Z, Zottig X, Huang CH, Loveland AB, Diggs S, Sholi E, Grigorieff N, Korostelev AA

EMDB-75768:
Rabbit 80S with IFRD2 and LARP1, 40S head-swiveled
Method: single particle / : Seraj Z, Zottig X, Huang CH, Loveland AB, Diggs S, Sholi E, Grigorrieff N, Korostelev AA

PDB-11he:
Rabbit 60S ribosomal subunit with eEF2 domain IV closed
Method: single particle / : Seraj Z, Zottig X, Huang CH, Loveland AB, Diggs S, Sholi E, Grigorieff N, Korostelev AA

PDB-11hg:
Rabbit 80S with eEF2,CCDC124,and LARP1,40S-head-swiveled
Method: single particle / : Seraj Z, Zottig X, Huang CH, Loveland AB, Diggs S, Sholi E, Grigorieff N, Korostelev AA

PDB-11hv:
Rabbit 60S ribosomal subunit with eEF2 domain IV open
Method: single particle / : Seraj Z, Zottig X, Huang CH, Loveland AB, Diggs S, Sholi E, Grigorieff N, Korostelev AA

PDB-11iq:
Rabbit 80S with eEF2,eIF5A and SERBP1
Method: single particle / : Seraj Z, Zottig X, Huang CH, Loveland AB, Diggs S, Sholi E, Grigorieff N, Korostelev AA

PDB-11jj:
Rabbit 80S with eEF2,IFRD2 and LARP1,40S-head-swiveled
Method: single particle / : Seraj Z, Zottig X, Huang CH, Loveland AB, Diggs S, Sholi E, Grigorieff N, Korostelev AA

PDB-11kh:
Rabbit 80S with IFRD2 and LARP1, 40S head-swiveled
Method: single particle / : Seraj Z, Zottig X, Huang CH, Loveland AB, Diggs S, Sholi E, Grigorrieff N, Korostelev AA

EMDB-49747:
MPXV replisome bound to ssDNA
Method: single particle / : Yu Z, Abraham J

EMDB-75504:
MPXV replisome bound to forked DNA
Method: single particle / : Yu Z, Abraham J

EMDB-76148:
MPXV polymerase-E5 primase core complex
Method: single particle / : Yu Z, Abarham J

EMDB-56520:
Cryo-EM map of SKM-70S complex State 2 (Accommodating A-tRNA)
Method: single particle / : Morici M, Corazza M, Safdari HA, Wilson DN

EMDB-56525:
Cryo-EM map of SKM-70S complex State 4 (Accommodated A-tRNA)
Method: single particle / : Morici M, Corazza M, Safdari HA, Wilson DN

EMDB-56530:
Cryo-EM map of SKM-70S complex State 6 (Empty, canonical)
Method: single particle / : Morici M, Corazza M, Safdari HA, Wilson DN

EMDB-57122:
Cryo-EM map of SKM-70S complex State 7 (Empty, rotated)
Method: single particle / : Morici M, Corazza M, Safdari HA, Wilson DN

EMDB-70400:
amyloid fibril of recombinant transforming growth factor beta induced protein FAS1-4 domain with V624M mutation
Method: helical / : Jiang YX, Sawaya MR, Eisenberg DS

EMDB-70401:
amyloid fibril of recombinant transforming growth factor beta induced protein FAS1-4 domain with V624M mutation, refined using helical spacing of peripheral globular domain
Method: single particle / : Jiang YX, Sawaya MR, Eisenberg DS

EMDB-56657:
CTX/MthK complex
Method: single particle / : Qoraj D, Sprink T, Lange A

Pages:

+
About EMN search

-
News

-
Feb 9, 2022. New format data for meta-information of EMDB entries

New format data for meta-information of EMDB entries

  • Version 3 of the EMDB header file is now the official format.
  • The previous official version 1.9 will be removed from the archive.

Related info.:EMDB header

External links:wwPDB to switch to version 3 of the EMDB data model

-
Oct 5, 2021. Nobel Prize for mechanically activated and temperature-gated ion channels

Nobel Prize for mechanically activated and temperature-gated ion channels

  • The Nobel Prize in Physiology or Medicine 2021 was awarded jointly to David Julius and Ardem Patapoutian "for their discoveries of receptors for temperature and touch."
  • EM Navigator can help to find cryo-EM structure data by both pioneers.

External links:The Nobel Prize in Physiology or Medicine 2021 - NobelPrize.org / Structure data by Ardem Patapoutian / Structure data by David Julius

+
Aug 12, 2020. Covid-19 info

Covid-19 info

URL: https://pdbj.org/emnavi/covid19.php

New page: Covid-19 featured information page in EM Navigator.

Related info.:Covid-19 info / Mar 5, 2020. Novel coronavirus structure data

+
Mar 5, 2020. Novel coronavirus structure data

Novel coronavirus structure data

Related info.:Yorodumi Speices / Aug 12, 2020. Covid-19 info

External links:COVID-19 featured content - PDBj / Molecule of the Month (242)：Coronavirus Proteases

+
Jul 5, 2019. Downlodablable text data

Downlodablable text data

Some data of EM Navigator services can be downloaded as text file. Software such as Excel can load the data files.

PageDataFormat
EMN Searchsearch resultCSV, TSV, or JSON
EMN statisticsdata tableCSV or TSV

Related info.:EMN Search / EMN Statistics

-
EMN Search

3DEM data search

Advanced data search for EMDB and EM data in PDB widh various search and display options

Related info.:EMDB / PDB / EM Navigator / Q: What are the data sources of EM Navigator? / Yorodumi Search / Jul 5, 2019. Downlodablable text data

Read more