[English] 日本語
- 3DEM data search -

-
Search query


Keywords
Database /
Q: What are the data sources of EM Navigator?
Data entries / weeks ago
Q: When the data are updated?
Author
Processing method
Display mode
Sort by
Num. of entries / page
Entry
Article
Sample
Experiment
Processing
Max number of data0 for all data
File format
  • CSV format (Comma-Separated Values, for Excel, etc.)
  • TSV format (Tab Separated Values, for Excel, etc.)
  • JSON format

Yorodumi Search

-
Search result

Showing 1 - 50 of 6,181 items for (author: hong & c)

EMDB-49124:
Consensus reconstruction of the Dp71L-PP1A-eIF2alpha holophosphatase stabilized by G-actin/DNAseI
Method: single particle / : Reineke LC, Dalwadi U, Croll T, Arthur C, Lee DJ, Frost A, Costa-Mattioli M

EMDB-49162:
Focused refinement of G-actin within the Dp71L-PP1A-eIF2alpha-DNAseI-G-actin complex
Method: single particle / : Dalwadi U, Reineke LC, Lee DJ, Arthur C, Croll T, Frost A, Costa-Mattioli M

EMDB-49163:
Focused refinement of the Dp71L-eIF2alpha-PP1A subcomplex within the holo-phosphatase complex.
Method: single particle / : Dalwadi U, Reineke LC, Lee DJ, Arthur C, Croll T, Frost A, Costa-Mattioli M

EMDB-49164:
Focused refinement of DNAseI within the Dp71L-eIF2alpha-PP1A-Gactin-DNAseI holo-phosphatase complex.
Method: single particle / : Dalwadi U, Reineke LC, Lee DJ, Arthur C, Croll T, Frost A, Costa-Mattioli M

EMDB-49223:
Viral protein DP71L in complex with phosphorylated eIF2alpha (NTD) and protein phosphatase 1A (D64A), stabilized by G-actin/DNAseI
Method: single particle / : Reineke LC, Dalwadi U, Croll T, Arthur C, Lee DJ, Frost A, Costa-Mattioli M

PDB-9nb9:
Viral protein DP71L in complex with phosphorylated eIF2alpha (NTD) and protein phosphatase 1A (D64A), stabilized by G-actin/DNAseI
Method: single particle / : Reineke LC, Dalwadi U, Croll T, Arthur C, Lee DJ, Frost A, Costa-Mattioli M

EMDB-61370:
Cryo-EM structure of the proton-sensing GPCR (GPR4)-Gs protein complex at pH 6.5
Method: single particle / : You C, Xu HE, Jiang Y

EMDB-61371:
Cryo-EM structure of the proton-sensing GPCR (GPR4)-Gq protein complex at pH 7.4
Method: single particle / : Xu HE, You C, Jiang Y

EMDB-61372:
Cryo-EM structure of the proton-sensing GPCR (GPR4)-Gs protein complex at pH 7.4
Method: single particle / : You C, Xu HE, Jiang Y

PDB-9jco:
Cryo-EM structure of the proton-sensing GPCR (GPR4)-Gs protein complex at pH 6.5
Method: single particle / : You C, Xu HE, Jiang Y

PDB-9jcp:
Cryo-EM structure of the proton-sensing GPCR (GPR4)-Gq protein complex at pH 7.4
Method: single particle / : Xu HE, You C, Jiang Y

PDB-9jcq:
Cryo-EM structure of the proton-sensing GPCR (GPR4)-Gs protein complex at pH 7.4
Method: single particle / : You C, Xu HE, Jiang Y

EMDB-63646:
I-shaped amyloid fiber (40) of Tottori (D7N) mutant
Method: helical / : Burton-Smith RN, Murata K

EMDB-63647:
V-shaped amyloid fiber (40) of Tottori (D7N) mutant (type 1)
Method: helical / : Burton-Smith RN, Murata K

EMDB-63648:
V'-shaped short pitch amyloid fiber (40) of Tottori (D7N) mutant
Method: helical / : Burton-Smith RN, Murata K

EMDB-64274:
V-shaped amyloid fiber (40) of Tottori (D7N) mutant (type 2)
Method: helical / : Burton-Smith RN, Murata K

PDB-9m5p:
I-type amyloid fibril (40) of Tottori (D7N) mutant
Method: helical / : Burton-Smith RN, Murata K

PDB-9m5q:
V-type (V1-type) amyloid fibril (40) of Tottori (D7N) mutant
Method: helical / : Burton-Smith RN, Murata K

PDB-9m5r:
ES-type (short pitch) amyloid fibril (40) of Tottori (D7N) mutant
Method: helical / : Burton-Smith RN, Murata K

PDB-9umh:
V-type (V2-type) amyloid fibril (40) of Tottori (D7N) mutant
Method: helical / : Burton-Smith RN, Murata K

EMDB-64606:
Anamorelin bound growth hormone secretagogue receptor in complex with Gq
Method: single particle / : Wang R, Sun J, Liu H, Guo S, Zhang Y, Hu W, Wang J, Zhuang Y, Jiang Y, Xie X, Xu HE, Wang Y

EMDB-64734:
Macimorelin bound growth hormone secretagogue receptor in complex with Gq
Method: single particle / : Wang R, Sun J, Liu H, Guo S, Zhang Y, Hu W, Wang J, Zhuang Y, Jiang Y, Xie X, Xu H, Wang Y

PDB-9uy3:
Anamorelin bound growth hormone secretagogue receptor in complex with Gq
Method: single particle / : Wang R, Sun J, Liu H, Guo S, Zhang Y, Hu W, Wang J, Liu H, Zhuang Y, Jiang Y, Xie X, Xu HE, Wang Y

PDB-9v2n:
Macimorelin bound growth hormone secretagogue receptor in complex with Gq
Method: single particle / : Wang R, Sun J, Liu H, Guo S, Zhang Y, Hu W, Wang J, Liu H, Zhuang Y, Jiang Y, Xie X, Xu H, Wang Y

EMDB-45236:
Subtomogram average (D3) of fatty acid synthase from S.cerevisiae prepared using cryo-plasmaFIB milling
Method: subtomogram averaging / : Feathers JR, Zhong ED, Khavnekar S

EMDB-62131:
Cryo-EM Structure of hAGO2D669A-siRNA-target (12-nt)
Method: single particle / : Li ZZ, Xu QK, Wu JP, Shen EZ

EMDB-62132:
Cryo-EM Structure of hAGO2D669A-siRNA-target (14-nt, bilobed)
Method: single particle / : Li ZZ, Xu QK, Wu JP, Shen EZ

EMDB-62133:
Cryo-EM Structure of hAGO2D669A-siRNA-target (14-nt, uni-lobed)
Method: single particle / : Li ZZ, Xu QK, Wu JP, Shen EZ

EMDB-62134:
Cryo-EM Structure of hAGO2D669A-siRNA-target (19-nt)
Method: single particle / : Li ZZ, Xu QK, Wu JP, Shen EZ

EMDB-62135:
Cryo-EM Structure of hAGO2D669A-siRNA-target (21-nt)
Method: single particle / : Li ZZ, Xu QK, Wu JP, Shen EZ

PDB-9k6p:
Cryo-EM Structure of hAGO2D669A-siRNA-target (12-nt)
Method: single particle / : Li ZZ, Xu QK, Wu JP, Shen EZ

PDB-9k6q:
"Cryo-EM Structure of hAGO2D669A-siRNA-target (14-nt, sesqui-lobed)
Method: single particle / : Li ZZ, Xu QK, Wu JP, Shen EZ

PDB-9k6r:
Cryo-EM Structure of hAGO2D669A-siRNA-target (14-nt, uni-lobed)
Method: single particle / : Li ZZ, Xu QK, Wu JP, Shen EZ

PDB-9k6s:
Cryo-EM Structure of hAGO2D669A-siRNA-target (19-nt)
Method: single particle / : Li ZZ, Xu QK, Wu JP, Shen EZ

PDB-9k6t:
Cryo-EM Structure of hAGO2D669A-siRNA-target (21-nt)
Method: single particle / : Li ZZ, Xu QK, Wu JP, Shen EZ

EMDB-49411:
AMC016 v4.2 in complex with pAb Base-A isolated from animal RQk18 at week 43
Method: single particle / : Pratap PP, Ozorowski G, Ward AB

EMDB-49412:
AMC016 v4.2 in complex with Base-C pAb isolated from animal RQk18 at week 43
Method: single particle / : Pratap PP, Ozorowski G, Ward AB

EMDB-49413:
AMC016 v4.2 in complex with FP-A pAb from animal RQk18 at week 43
Method: single particle / : Pratap PP, Ozorowski G, Ward AB

EMDB-49414:
BG505-CH505 Env glycoprotein in complex with NHP pAb Base-4 isolated from animal RUu18 at week 14
Method: single particle / : Pratap PP, Ozorowski G, Ward AB

EMDB-49415:
BG505-CH505 Env glycoprotein in complex with NHP pAb FP-1 isolated from animal RUu18 at week 14
Method: single particle / : Pratap PP, Ozorowski G, Ward AB

EMDB-49416:
BG505-CH505 Env glycoprotein in complex with NHP pAb V1V2V3-1 isolated from animal RUu18 at week 14
Method: single particle / : Pratap PP, Ozorowski G, Ward AB

EMDB-49417:
BG505-CH505 Env glycoprotein in complex with NHP pAb V1V2V3-2 isolated from animal RUu18 at week 14
Method: single particle / : Pratap PP, Ozorowski G, Ward AB

EMDB-49418:
BG505-CH505 Env glycoprotein in complex with NHP pAb V1V2V3-5 isolated from animal RUu18 at week 14
Method: single particle / : Pratap PP, Ozorowski G, Ward AB

EMDB-49457:
BG505-CH505 Env glycoprotein in complex with NHP pAb Base-1 isolated from animal RUu18 at week 14
Method: single particle / : Pratap PP, Ozorowski G, Ward AB

EMDB-70702:
nsEM map of macaque RUu18 week 4 polyclonal Fab in complex with BG505-CH505+N241
Method: single particle / : Pratap PP, Ozorowski G, Ward AB

EMDB-70703:
nsEM map of macaque RMu18 week 4 polyclonal Fab in complex with BG505-CH505+N241
Method: single particle / : Pratap PP, Ozorowski G, Ward AB

EMDB-70704:
nsEM map of macaque RQk18 week 4 polyclonal Fab in complex with BG505-CH505dN241
Method: single particle / : Pratap PP, Ozorowski G, Ward AB

EMDB-70705:
nsEM map of macaque LJ66 week 4 polyclonal Fab in complex with BG505-CH505dN241
Method: single particle / : Pratap PP, Ozorowski G, Ward AB

EMDB-70706:
nsEM map of macaque RUu18 week 14 polyclonal Fab in complex with BG505-CH505+N241
Method: single particle / : Pratap PP, Ozorowski G, Ward AB

EMDB-70707:
nsEM map of macaque RMu18 week 14 polyclonal Fab in complex with BG505-CH505+N241
Method: single particle / : Pratap PP, Ozorowski G, Ward AB

Pages:

+
About EMN search

-
News

-
Feb 9, 2022. New format data for meta-information of EMDB entries

New format data for meta-information of EMDB entries

  • Version 3 of the EMDB header file is now the official format.
  • The previous official version 1.9 will be removed from the archive.

Related info.:EMDB header

External links:wwPDB to switch to version 3 of the EMDB data model

-
Oct 5, 2021. Nobel Prize for mechanically activated and temperature-gated ion channels

Nobel Prize for mechanically activated and temperature-gated ion channels

  • The Nobel Prize in Physiology or Medicine 2021 was awarded jointly to David Julius and Ardem Patapoutian "for their discoveries of receptors for temperature and touch."
  • EM Navigator can help to find cryo-EM structure data by both pioneers.

External links:The Nobel Prize in Physiology or Medicine 2021 - NobelPrize.org / Structure data by Ardem Patapoutian / Structure data by David Julius

+
Aug 12, 2020. Covid-19 info

Covid-19 info

URL: https://pdbj.org/emnavi/covid19.php

New page: Covid-19 featured information page in EM Navigator.

Related info.:Covid-19 info / Mar 5, 2020. Novel coronavirus structure data

+
Mar 5, 2020. Novel coronavirus structure data

Novel coronavirus structure data

Related info.:Yorodumi Speices / Aug 12, 2020. Covid-19 info

External links:COVID-19 featured content - PDBj / Molecule of the Month (242):Coronavirus Proteases

+
Jul 5, 2019. Downlodablable text data

Downlodablable text data

Some data of EM Navigator services can be downloaded as text file. Software such as Excel can load the data files.

PageDataFormat
EMN Searchsearch resultCSV, TSV, or JSON
EMN statisticsdata tableCSV or TSV

Related info.:EMN Search / EMN Statistics

-
EMN Search

3DEM data search

Advanced data search for EMDB and EM data in PDB widh various search and display options

Related info.:EMDB / PDB / EM Navigator / Q: What are the data sources of EM Navigator? / Yorodumi Search / Jul 5, 2019. Downlodablable text data

Read more