[English] 日本語
EMN search
- 3DEM data search -

-
Search query


Keywords
Database /
Q: What are the data sources of EM Navigator?
Data entries / weeks ago
Q: When the data are updated?
Author
Processing method
Display mode
Sort by
Num. of entries / page
Entry
Article
Sample
Experiment
Processing
Max number of data0 for all data
File format
  • CSV format (Comma-Separated Values, for Excel, etc.)
  • TSV format (Tab Separated Values, for Excel, etc.)
  • JSON format

Yorodumi Search

-
Search result

Showing 1 - 50 of 66 items for (author: giese & h)

EMDB-17691:
60-meric complex of dihydrolipoamide acetyltransferase (E2) of the human pyruvate dehydrogenase complex (icosahedral symmetry)
Method: single particle / : Zdanowicz R, Afanasyev P, Boehringer D, Glockshuber R

EMDB-17694:
60-meric complex of dihydrolipoamide acetyltransferase (E2) of the human pyruvate dehydrogenase complex (tetrahedral symmetry)
Method: single particle / : Zdanowicz R, Afanasyev P, Boehringer D, Glockshuber R

EMDB-18616:
E2/E3BP core of the human pyruvate dehydrogenase complex (map 1; 3.4 A)
Method: single particle / : Zdanowicz R, Afanasyev P, Boehringer D, Glockshuber R

EMDB-18617:
E2/E3BP core of the human pyruvate dehydrogenase complex (map 2; 3.7 A)
Method: single particle / : Zdanowicz R, Afanasyev P, Boehringer D, Glockshuber R

PDB-8piu:
60-meric complex of dihydrolipoamide acetyltransferase (E2) of the human pyruvate dehydrogenase complex
Method: single particle / : Zdanowicz R, Afanasyev P, Boehringer D, Glockshuber R

EMDB-17863:
2.7 A cryo-EM structure of in vitro assembled type 1 pilus rod
Method: helical / : Hospenthal M, Zyla D, Glockshuber R, Waksman G

EMDB-17878:
2.5 A cryo-EM structure of the in vitro FimD-catalyzed assembly of type 1 pilus rod
Method: helical / : Zyla D, Hospenthal M, Glockshuber R, Waksman G

PDB-8psv:
2.7 A cryo-EM structure of in vitro assembled type 1 pilus rod
Method: helical / : Hospenthal M, Zyla D, Glockshuber R, Waksman G

PDB-8ptu:
2.5 A cryo-EM structure of the in vitro FimD-catalyzed assembly of type 1 pilus rod
Method: helical / : Zyla D, Hospenthal M, Glockshuber R, Waksman G

EMDB-17119:
24-meric catalytic domain of dihydrolipoamide acetyltransferase (E2) of the E. coli pyruvate dehydrogenase complex.
Method: single particle / : Zdanowicz R, Meinhold S, Glockshuber R

EMDB-17126:
E. coli pyruvate dehydrogenase (E1) in complex with dihydrolipoamide acetyltransferase (E2) peripheral subunit-binding domain.
Method: single particle / : Zdanowicz R, Meinhold S, Glockshuber R

PDB-8orb:
24-meric catalytic domain of dihydrolipoamide acetyltransferase (E2) of the E. coli pyruvate dehydrogenase complex.
Method: single particle / : Zdanowicz R, Meinhold S, Glockshuber R

EMDB-41156:
HCMV Trimer in complex with CS2it1p2_F7K Fab and CS4tt1p1_E3K Fab
Method: single particle / : Goldsmith JA, McLellan JS

EMDB-41157:
Global reconstruction for HCMV Trimer in complex with CS2it1p2_F7K Fab and CS4tt1p1_E3K Fab
Method: single particle / : Goldsmith JA, McLellan JS

EMDB-41158:
CS2it1p2_F7K local refinement for HCMV Trimer in complex with CS2it1p2_F7K Fab and CS4tt1p1_E3K Fab
Method: single particle / : Goldsmith JA, McLellan JS

EMDB-41160:
CS4tt1p1_E3K local refinement for HCMV Trimer in complex with CS2it1p2_F7K Fab and CS4tt1p1_E3K Fab
Method: single particle / : Goldsmith JA, McLellan JS

EMDB-41161:
gH base local refinement for HCMV Trimer in complex with CS2it1p2_F7K Fab and CS4tt1p1_E3K Fab
Method: single particle / : Goldsmith JA, McLellan JS

EMDB-41179:
HCMV Pentamer in complex with CS2pt1p2_A10L Fab and CS3pt1p4_C1L Fab
Method: single particle / : Goldsmith JA, McLellan JS

EMDB-41180:
Global reconstruction for HCMV Pentamer in complex with CS2pt1p2_A10L Fab and CS3pt1p4_C1L Fab
Method: single particle / : Goldsmith JG, McLellan JS

PDB-8tco:
HCMV Trimer in complex with CS2it1p2_F7K Fab and CS4tt1p1_E3K Fab
Method: single particle / : Goldsmith JA, McLellan JS

PDB-8tea:
HCMV Pentamer in complex with CS2pt1p2_A10L Fab and CS3pt1p4_C1L Fab
Method: single particle / : Goldsmith JA, McLellan JS

EMDB-28163:
Cryo-EM map of octopus sensory receptor CRT1
Method: single particle / : Kang G, Kim JJ, Allard CAH, Valencia-Montoya WA, Bellono NW, Hibbs RE

EMDB-28167:
Cryo-EM map of squid sensory receptor CRB1
Method: single particle / : Kang G, Kim JJ, Allard CAH, Valencia-Montoya WA, van Giesen L, Kilian PB, Bai X, Bellono NW, Hibbs RE

PDB-8eis:
Cryo-EM structure of octopus sensory receptor CRT1
Method: single particle / : Kang G, Kim JJ, Allard CAH, Valencia-Montoya WA, Bellono NW, Hibbs RE

PDB-8eiz:
Cryo-EM structure of squid sensory receptor CRB1
Method: single particle / : Kang G, Kim JJ, Allard CAH, Valencia-Montoya WA, van Giesen L, Kilian PB, Bai X, Bellono NW, Hibbs RE

EMDB-25008:
Structure of the SARS-CoV-2 S 6P trimer in complex with the human neutralizing antibody Fab fragment, R40-1G8
Method: single particle / : Fan C, Bjorkman PJ

PDB-7sc1:
Structure of the SARS-CoV-2 S 6P trimer in complex with the human neutralizing antibody Fab fragment, R40-1G8
Method: single particle / : Fan C, Bjorkman PJ

EMDB-12512:
cAMP-free rabbit HCN4 stabilized in LMNG-CHS detergent mixture
Method: single particle / : Giese H, Saponaro A

EMDB-12513:
cAMP-bound rabbit HCN4 stabilized in LMNG-CHS detergent mixture
Method: single particle / : Giese H, Saponaro A

PDB-7np3:
cAMP-free rabbit HCN4 stabilized in LMNG-CHS detergent mixture
Method: single particle / : Giese HM, Chaves-Sanjuan A, Saponaro A, Clarke O, Bolognesi M, Mancia F, Hendrickson WA, Thiel G, Santoro B, Moroni A

PDB-7np4:
cAMP-bound rabbit HCN4 stabilized in LMNG-CHS detergent mixture
Method: single particle / : Giese H, Chaves-Sanjuan A, Saponaro A, Clarke O, Bolognesi M, Mancia F, Hendrickson WA, Thiel G, Santoro B, Moroni A

EMDB-12466:
Rabbit HCN4 stabilised in amphipol A8-35
Method: single particle / : Swuec P

PDB-7nmn:
Rabbit HCN4 stabilised in amphipol A8-35
Method: single particle / : Chaves-Sanjuan A

EMDB-10721:
2.85 A cryo-EM structure of the in vivo assembled type 1 pilus rod
Method: helical / : Zyla D, Hospenthal M

PDB-6y7s:
2.85 A cryo-EM structure of the in vivo assembled type 1 pilus rod
Method: helical / : Zyla D, Hospenthal M, Waksman G, Glockshuber R

EMDB-22829:
Human Tom70 in complex with SARS CoV2 Orf9b
Method: single particle / : QCRG Structural Biology Consortium

PDB-7kdt:
Human Tom70 in complex with SARS CoV2 Orf9b
Method: single particle / : QCRG Structural Biology Consortium

EMDB-4520:
EM structure of a EBOV-GP bound to 3T0331 neutralizing antibody
Method: single particle / : Diskin R, Cohen-Dvashi H

EMDB-4521:
EM structure of a EBOV-GP bound to 4M0368 neutralizing antibody
Method: single particle / : Diskin R, Cohen-Dvashi H

PDB-6qd7:
EM structure of a EBOV-GP bound to 3T0331 neutralizing antibody
Method: single particle / : Diskin R, Cohen-Dvashi H

PDB-6qd8:
EM structure of a EBOV-GP bound to 4M0368 neutralizing antibody
Method: single particle / : Diskin R, Cohen-Dvashi H

EMDB-0102:
symmetric structure of tPDE6
Method: single particle / : Qureshi BM, Behrmann E, Loerke J, Spahn CMT, Heck M

EMDB-3809:
The Cryo-Electron Microscopy Structure of the Type 1 Chaperone-Usher Pilus Rod
Method: helical / : Hospenthal MK, Costa TRD, Redzej A, Waksman G

PDB-5oh0:
The Cryo-Electron Microscopy Structure of the Type 1 Chaperone-Usher Pilus Rod
Method: helical / : Hospenthal MK, Costa TRD, Redzej A, Waksman G

PDB-4cxg:
Regulation of the mammalian elongation cycle by 40S subunit rolling: a eukaryotic-specific ribosome rearrangement
Method: single particle / : Budkevich TV, Giesebrecht J, Behrmann E, Loerke J, Ramrath DJF, Mielke T, Ismer J, Hildebrand P, Tung CS, Nierhaus KH, Sanbonmatsu KY, Spahn CMT

PDB-4cxh:
Regulation of the mammalian elongation cycle by 40S subunit rolling: a eukaryotic-specific ribosome rearrangement
Method: single particle / : Budkevich TV, Giesebrecht J, Behrmann E, Loerke J, Ramrath DJF, Mielke T, Ismer J, Hildebrand P, Tung CS, Nierhaus KH, Sanbonmatsu KY, Spahn CMT

PDB-4uje:
Regulation of the mammalian elongation cycle by 40S subunit rolling: a eukaryotic-specific ribosome rearrangement
Method: single particle / : Budkevich TV, Giesebrecht J, Behrmann E, Loerke J, Ramrath DJF, Mielke T, Ismer J, Hildebrand P, Tung CS, Nierhaus KH, Sanbonmatsu KY, Spahn CMT

EMDB-2620:
POST-translocational 80S ribosomal state of Regulation of the mammalian elongation cycle by 40S subunit rolling: a eukaryotic-specific ribosome rearrangement
Method: single particle / : Budkevich TV, Giesebrecht J, Behrmann E, Loerke J, Ramrath D, Mielke T, Ismer J, Hildebrand P, Tung CS, Nierhaus KH, Sanbonmatsu KY, Spahn CMT

EMDB-2621:
PRE-translocational (classical-1) 80S ribosomal state of Regulation of the mammalian elongation cycle by 40S subunit rolling: a eukaryotic-specific ribosome rearrangement
Method: single particle / : Budkevich TV, Giesebrecht J, Behrmann E, Loerke J, Ramrath D, Mielke T, Ismer J, Hildebrand P, Tung CS, Nierhaus KH, Sanbonmatsu KY, Spahn CMT

EMDB-2622:
PRE-translocational (classical-2) 80S ribosomal state of Regulation of the mammalian elongation cycle by 40S subunit rolling: a eukaryotic-specific ribosome rearrangement
Method: single particle / : Budkevich TV, Giesebrecht J, Behrmann E, Loerke J, Ramrath D, Mielke T, Ismer J, Hildebrand P, Tung CS, Nierhaus KH, Sanbonmatsu KY, Spahn CMT

Pages:

+
About EMN search

-
News

-
Feb 9, 2022. New format data for meta-information of EMDB entries

New format data for meta-information of EMDB entries

  • Version 3 of the EMDB header file is now the official format.
  • The previous official version 1.9 will be removed from the archive.

Related info.:EMDB header

External links:wwPDB to switch to version 3 of the EMDB data model

-
Oct 5, 2021. Nobel Prize for mechanically activated and temperature-gated ion channels

Nobel Prize for mechanically activated and temperature-gated ion channels

  • The Nobel Prize in Physiology or Medicine 2021 was awarded jointly to David Julius and Ardem Patapoutian "for their discoveries of receptors for temperature and touch."
  • EM Navigator can help to find cryo-EM structure data by both pioneers.

External links:The Nobel Prize in Physiology or Medicine 2021 - NobelPrize.org / Structure data by Ardem Patapoutian / Structure data by David Julius

+
Aug 12, 2020. Covid-19 info

Covid-19 info

URL: https://pdbj.org/emnavi/covid19.php

New page: Covid-19 featured information page in EM Navigator.

Related info.:Covid-19 info / Mar 5, 2020. Novel coronavirus structure data

+
Mar 5, 2020. Novel coronavirus structure data

Novel coronavirus structure data

Related info.:Yorodumi Speices / Aug 12, 2020. Covid-19 info

External links:COVID-19 featured content - PDBj / Molecule of the Month (242):Coronavirus Proteases

+
Jul 5, 2019. Downlodablable text data

Downlodablable text data

Some data of EM Navigator services can be downloaded as text file. Software such as Excel can load the data files.

PageDataFormat
EMN Searchsearch resultCSV, TSV, or JSON
EMN statisticsdata tableCSV or TSV

Related info.:EMN Search / EMN Statistics

-
EMN Search

3DEM data search

Advanced data search for EMDB and EM data in PDB widh various search and display options

Related info.:EMDB / PDB / EM Navigator / Q: What are the data sources of EM Navigator? / Yorodumi Search / Jul 5, 2019. Downlodablable text data

Read more