[English] 日本語
- 3DEM data search -

-
Search query


Keywords
Database /
Q: What are the data sources of EM Navigator?
Data entries / weeks ago
Q: When the data are updated?
Author
Processing method
Display mode
Sort by
Num. of entries / page
Entry
Article
Sample
Experiment
Processing
Max number of data0 for all data
File format
  • CSV format (Comma-Separated Values, for Excel, etc.)
  • TSV format (Tab Separated Values, for Excel, etc.)
  • JSON format

Yorodumi Search

-
Search result

Showing all 27 items for (author: gamerdinger & m)

EMDB-55351:
Human quaternary complex of a translating 80S ribosome, NAC, MetAP1 and NatD
Method: single particle / : Yudin D, Jaskolowski M, Scaiola A, Ban N

PDB-9syr:
Human quaternary complex of a translating 80S ribosome, NAC, MetAP1 and NatD
Method: single particle / : Yudin D, Jaskolowski M, Scaiola A, Ban N

EMDB-53295:
Ternary complex of translating ribosome, NAC and NMT1
Method: single particle / : Echeverria B, Jaskolowski M, Scaiola A, Ban N

EMDB-53296:
Quaternary complex of a translating ribosome, NAC, NMT1, and NatA
Method: single particle / : Echeverria B, Jaskolowski M, Scaiola A, Ban N

PDB-9qqa:
Ternary complex of translating ribosome, NAC and NMT1
Method: single particle / : Echeverria B, Jaskolowski M, Scaiola A, Ban N

PDB-9qqb:
Quaternary complex of a translating ribosome, NAC, NMT1, and NatA
Method: single particle / : Echeverria B, Jaskolowski M, Scaiola A, Ban N

EMDB-50127:
Mammalian ternary complex of a translating 80S ribosome, NAC and NatA/E - local refinement
Method: single particle / : Yudin D, Scaiola A, Ban N

EMDB-50128:
Mammalian quaternary complex of a translating 80S ribosome, NAC, MetAP1 and NatA/E - local refinement
Method: single particle / : Yudin D, Scaiola A, Ban N

EMDB-50129:
Mammalian quaternary complex of a translating 80S ribosome, NAC, MetAP1 and NatA/E-HYPK - local refinement
Method: single particle / : Yudin D, Scaiola A, Ban N

EMDB-50130:
Mammalian ternary complex of an 80S ribosome, NAC and NatA/E
Method: single particle / : Yudin D, Scaiola A, Ban N

EMDB-50124:
Mammalian ternary complex of a translating 80S ribosome, NAC and NatA/E
Method: single particle / : Yudin D, Scaiola A, Ban N

EMDB-50125:
Mammalian quaternary complex of a translating 80S ribosome, NAC, MetAP1 and NatA/E
Method: single particle / : Yudin D, Scaiola A, Ban N

EMDB-50126:
Mammalian quaternary complex of a translating 80S ribosome, NAC, MetAP1 and NatA/E-HYPK
Method: single particle / : Yudin D, Scaiola A, Ban N

PDB-9f1b:
Mammalian ternary complex of a translating 80S ribosome, NAC and NatA/E
Method: single particle / : Yudin D, Scaiola A, Ban N

PDB-9f1c:
Mammalian quaternary complex of a translating 80S ribosome, NAC, MetAP1 and NatA/E
Method: single particle / : Yudin D, Scaiola A, Ban N

PDB-9f1d:
Mammalian quaternary complex of a translating 80S ribosome, NAC, MetAP1 and NatA/E-HYPK
Method: single particle / : Yudin D, Scaiola A, Ban N

EMDB-17367:
Ternary complex of translating ribosome, NAC and METAP1
Method: single particle / : Jia M, Jaskolowski M, Scaiola A, Jomaa A, Ban N

PDB-8p2k:
Ternary complex of translating ribosome, NAC and METAP1
Method: single particle / : Jia M, Jaskolowski M, Scaiola A, Jomaa A, Ban N

EMDB-16232:
Structure of the TRAP complex with the Sec translocon and a translating ribosome
Method: single particle / : Jaskolowski M, Jomaa A, Gamerdinger M, Shrestha S, Leibundgut M, Deuerling E, Ban N

PDB-8btk:
Structure of the TRAP complex with the Sec translocon and a translating ribosome
Method: single particle / : Jaskolowski M, Jomaa A, Gamerdinger M, Shrestha S, Leibundgut M, Deuerling E, Ban N

EMDB-14191:
Ternary complex of ribosome nascent chain with SRP and NAC
Method: single particle / : Jomaa A, Gamerdinger M, Hsieh H, Wallisch A, Chandrasekaran V, Ulusoy Z, Scaiola A, Hegde R, Shan S, Ban N, Deuerling E

PDB-7qwq:
Ternary complex of ribosome nascent chain with SRP and NAC
Method: single particle / : Jomaa A, Gamerdinger M, Hsieh H, Wallisch A, Chandrasekaran V, Ulusoy Z, Scaiola A, Hegde R, Shan S, Ban N, Deuerling E

EMDB-14192:
Structure of the ribosome-nascent chain containing an ER signal sequence in complex with NAC
Method: single particle / : Jomaa A, Gamerdinger M

EMDB-14193:
Structure of ribosome translating beta-tubulin in complex with TTC5 and NAC
Method: single particle / : Jomaa A, Gamerdinger M

PDB-7qwr:
Structure of the ribosome-nascent chain containing an ER signal sequence in complex with NAC
Method: single particle / : Jomaa A, Gamerdinger M, Hsieh H, Wallisch A, Chandrasekaran V, Ulusoy Z, Scaiola A, Hegde R, Shan S, Ban N, Deuerling E

PDB-7qws:
Structure of ribosome translating beta-tubulin in complex with TTC5 and NAC
Method: single particle / : Jomaa A, Gamerdinger M, Hsieh H, Wallisch A, Chandrasekaran V, Ulusoy Z, Scaiola A, Hegde R, Shan S, Ban N, Deuerling E

EMDB-4938:
C.elegans NAC-ribosomal 60S complex
Method: single particle / : Kobayashi K, Jomaa A, Ban N

+
About EMN search

-
News

-
Feb 9, 2022. New format data for meta-information of EMDB entries

New format data for meta-information of EMDB entries

  • Version 3 of the EMDB header file is now the official format.
  • The previous official version 1.9 will be removed from the archive.

Related info.:EMDB header

External links:wwPDB to switch to version 3 of the EMDB data model

-
Oct 5, 2021. Nobel Prize for mechanically activated and temperature-gated ion channels

Nobel Prize for mechanically activated and temperature-gated ion channels

  • The Nobel Prize in Physiology or Medicine 2021 was awarded jointly to David Julius and Ardem Patapoutian "for their discoveries of receptors for temperature and touch."
  • EM Navigator can help to find cryo-EM structure data by both pioneers.

External links:The Nobel Prize in Physiology or Medicine 2021 - NobelPrize.org / Structure data by Ardem Patapoutian / Structure data by David Julius

+
Aug 12, 2020. Covid-19 info

Covid-19 info

URL: https://pdbjlvh1.pdbj.org/emnavi/covid19.php

New page: Covid-19 featured information page in EM Navigator.

Related info.:Covid-19 info / Mar 5, 2020. Novel coronavirus structure data

+
Mar 5, 2020. Novel coronavirus structure data

Novel coronavirus structure data

Related info.:Yorodumi Speices / Aug 12, 2020. Covid-19 info

External links:COVID-19 featured content - PDBj / Molecule of the Month (242)：Coronavirus Proteases

+
Jul 5, 2019. Downlodablable text data

Downlodablable text data

Some data of EM Navigator services can be downloaded as text file. Software such as Excel can load the data files.

PageDataFormat
EMN Searchsearch resultCSV, TSV, or JSON
EMN statisticsdata tableCSV or TSV

Related info.:EMN Search / EMN Statistics

-
EMN Search

3DEM data search

Advanced data search for EMDB and EM data in PDB widh various search and display options

Related info.:EMDB / PDB / EM Navigator / Q: What are the data sources of EM Navigator? / Yorodumi Search / Jul 5, 2019. Downlodablable text data

Read more