[English] 日本語
- 3DEM data search -

-
Search query


Keywords
Database /
Q: What are the data sources of EM Navigator?
Data entries / weeks ago
Q: When the data are updated?
Author
Processing method
Display mode
Sort by
Num. of entries / page
Entry
Article
Sample
Experiment
Processing
Max number of data0 for all data
File format
  • CSV format (Comma-Separated Values, for Excel, etc.)
  • TSV format (Tab Separated Values, for Excel, etc.)
  • JSON format

Yorodumi Search

-
Search result

Showing 1 - 50 of 552 items for (author: fernandez & la)

EMDB-54428:
Cryo-EM structure of the endogeneous MIWI in complex with pachytene piRNA at 3A
Method: single particle / : Raad NG, Fernandez-Rodriguez C, Pandey RR, Mohammed I, Uchikawa E, Burger F, Homolka D, Pillai RS

EMDB-54446:
Cryo-EM structure of the endogeneous MIWI in complex with pachytene piRNA at 2.8A
Method: single particle / : Raad NG, Fernandez-Rodriguez C, Pandey RR, Mohammed I, Uchikawa E, Burger F, Homolka D, Pillai RS

EMDB-54907:
Cryo-EM structure of the endogeneous MIWI in complex with pachytene piRNA at 3.3A
Method: single particle / : Raad NG, Fernandez-Rodriguez C, Pandey RR, Mohammed I, Uchikawa E, Burger F, Homolka D, Pillai RS

EMDB-54908:
Cryo-EM structure of the endogeneous MIWI in complex with pachytene piRNA at 4.2A
Method: single particle / : Raad NG, Fernandez-Rodriguez C, Pandey RR, Mohammed I, Uchikawa E, Burger F, Homolka D, Pillai RS

PDB-9s0z:
Cryo-EM structure of the endogeneous MIWI in complex with pachytene piRNA at 3A
Method: single particle / : Raad NG, Fernandez-Rodriguez C, Pandey RR, Mohammed I, Uchikawa E, Burger F, Homolka D, Pillai RS

PDB-9s1e:
Cryo-EM structure of the endogeneous MIWI in complex with pachytene piRNA at 2.8A
Method: single particle / : Raad NG, Fernandez-Rodriguez C, Pandey RR, Mohammed I, Uchikawa E, Burger F, Homolka D, Pillai RS

PDB-9shp:
Cryo-EM structure of the endogeneous MIWI in complex with pachytene piRNA at 3.3A
Method: single particle / : Raad NG, Fernandez-Rodriguez C, Pandey RR, Mohammed I, Uchikawa E, Burger F, Homolka D, Pillai RS

PDB-9shq:
Cryo-EM structure of the endogeneous MIWI in complex with pachytene piRNA at 4.2A
Method: single particle / : Raad NG, Fernandez-Rodriguez C, Pandey RR, Mohammed I, Uchikawa E, Burger F, Homolka D, Pillai RS

EMDB-71884:
10E8-GT10.2 immunogen in complex with mouse Fab W6-10 and rhesus macaque Fab W10-09
Method: single particle / : Huang J, Ward AB

EMDB-71885:
10E8-GT10.2 immunogen in complex with Rhesus macaque Fab W3-02 and mouse Fab W6-03
Method: single particle / : Huang J, Ward AB

EMDB-54480:
Tomogram of unbudded yeast cell overexpressing Ldm1
Method: electron tomography / : Keller J, Diep DTV, Zhao XT, Bohnert M, Fernandez-Busnadiego R

EMDB-54483:
Tomogram of yeast cell overexpressing Ldm1, treated with alpha-factor
Method: electron tomography / : Keller J, Diep DTV, Zhao XT, Bohnert M, Fernandez-Busnadiego R

EMDB-54898:
ATP-bound human mitochondrial Hsp60-Hsp10 football complex (D7)
Method: single particle / : Lopez-Alonso JP, Tascon I, Ubarretxena-Belandia I

EMDB-54899:
ATP-bound human mitochondrial Hsp60-Hsp10 bullet complex (C7)
Method: single particle / : Lopez-Alonso JP, Tascon I, Ubarretxena-Belandia I

EMDB-54900:
ATP-bound human mitochondrial Hsp60-Hsp10 half-football complex (C7)
Method: single particle / : Lopez-Alonso JP, Tascon I, Ubarretxena-Belandia I

EMDB-54901:
ATP-bound human mitochondrial Hsp60-Hsp10 double-ring complex (D7)
Method: single particle / : Lopez-Alonso JP, Tascon I, Ubarretxena-Belandia I

EMDB-54902:
ADP-bound human mitochondrial Hsp60 single ring complex (C7)
Method: single particle / : Lopez-Alonso JP, Tascon I, Ubarretxena-Belandia I

EMDB-54903:
ATP-bound human mitochondrial Hsp60 single-ring complex (C7)
Method: single particle / : Lopez-Alonso JP, Tascon I, Ubarretxena-Belandia I

EMDB-55203:
Subtomogram average of the 39S mitochondrial ribosome from HeLa
Method: subtomogram averaging / : Ehses K, Fernandez-Busnadiego R

EMDB-55204:
Subtomogram average of the 55S mitochondrial ribosome from HeLa
Method: subtomogram averaging / : Ehses K, Fernandez-Busnadiego R

EMDB-55205:
Subtomogram average of the mtHsp60 singlering complex from HeLa
Method: subtomogram averaging / : Ehses K, Fernandez-Busnadiego R

EMDB-55206:
Subtomogram average of the mtHsp60:mtHsp10 half-football complex from HeLa
Method: subtomogram averaging / : Ehses K, Fernandez-Busnadiego R

EMDB-55207:
Subtomogram average of the mtHsp60:mtHsp10 Football complex from HeLa
Method: subtomogram averaging / : Ehses K, Fernandez-Busnadiego R

EMDB-54486:
Tomogram of yeast cell overexpressing Ldm1, treated with alpha-factor (unbudded region)
Method: electron tomography / : Keller J, Diep DTV, Zhao XT, Bohnert M, Fernandez-Busnadiego R

EMDB-54487:
Tomogram of yeast cell overexpressing Ldm1, treated with alpha-factor(bud region)
Method: electron tomography / : Keller J, Diep DTV, Zhao XT, Bohnert M, Fernandez-Busnadiego R

EMDB-54489:
Tomogram of a yeast cell treated with alpha-factor (bud region)
Method: electron tomography / : Keller J, Diep DTV, Zhao XT, Bohnert M, Fernandez-Busnadiego R

EMDB-54497:
Tomogram of a yeast cell treated with alpha-factor (bud region)
Method: electron tomography / : Keller J, Diep DTV, Zhao XT, Bohnert M, Fernandez-Busnadiego R

EMDB-49201:
Cryo-EM structure of 110_C4 Fab in complex with CIDRa1.7 PfEMP1
Method: single particle / : Raghavan SSR, Ward AB

EMDB-46479:
Cryo-EM structure of amyloid fibril extracted from heart of a variant ATTR T60A amyloidosis patient 1
Method: helical / : Nguyen AB, Fernandez-Ramirez MC, Saelices L

EMDB-46481:
Cryo-EM structure of amyloid fibril extracted from heart of a variant ATTR T60A amyloidosis patient 2
Method: helical / : Nguyen AB, Fernandez-Ramirez MC, Saelices L

EMDB-46482:
Cryo-EM structure of amyloid fibril extracted from thyroid of a variant ATTR T60A amyloidosis patient 3
Method: helical / : Nguyen AB, Fernandez-Ramirez MC, Saelices L

EMDB-46487:
Cryo-EM structure of amyloid fibril extracted from kidney of a variant ATTR T60A amyloidosis patient 3
Method: helical / : Nguyen AB, Fernandez-Ramirez MC, Saelices L

EMDB-46495:
Cryo-EM structure of amyloid fibril extracted from liver of a variant ATTR T60A amyloidosis patient 3
Method: helical / : Nguyen AB, Fernandez-Ramirez MC, Saelices L

EMDB-46496:
Cryo-EM structure of amyloid fibril extracted from heart of a variant ATTR T60A amyloidosis patient 3
Method: helical / : Nguyen AB, Fernandez-Ramirez MC, Saelices L

PDB-9d21:
Cryo-EM structure of amyloid fibril extracted from heart of a variant ATTR T60A amyloidosis patient 1
Method: helical / : Nguyen AB, Fernandez-Ramirez MC, Saelices L

PDB-9d23:
Cryo-EM structure of amyloid fibril extracted from heart of a variant ATTR T60A amyloidosis patient 2
Method: helical / : Nguyen AB, Fernandez-Ramirez MC, Saelices L

PDB-9d24:
Cryo-EM structure of amyloid fibril extracted from thyroid of a variant ATTR T60A amyloidosis patient 3
Method: helical / : Nguyen AB, Fernandez-Ramirez MC, Saelices L

PDB-9d27:
Cryo-EM structure of amyloid fibril extracted from kidney of a variant ATTR T60A amyloidosis patient 3
Method: helical / : Nguyen AB, Fernandez-Ramirez MC, Saelices L

PDB-9d2g:
Cryo-EM structure of amyloid fibril extracted from liver of a variant ATTR T60A amyloidosis patient 3
Method: helical / : Nguyen AB, Fernandez-Ramirez MC, Saelices L

EMDB-51827:
Porcine hemagglutinating encephalomyelitis virus (PHEV) Spike in the closed conformation, apo state
Method: single particle / : Fernandez I, Rey FA

EMDB-51844:
Porcine hemagglutinating encephalomyelitis virus (PHEV) Spike in the 1-RBD-up conformation
Method: single particle / : Fernandez I, Rey FA

EMDB-51845:
Porcine hemagglutinating encephalomyelitis virus (PHEV) Spike protein in the 2-RBD-up conformation
Method: single particle / : Fernandez I, Rey FA

EMDB-51846:
Porcine hemagglutinating encephalomyelitis virus (PHEV) Spike protein in the open conformation
Method: single particle / : Fernandez I, Rey FA

EMDB-53679:
Local refinement of the N-terminal domain (NTD) and receptor binding domain (RBD) from the Porcine hemagglutinating encephalomyelitis virus (PHEV) Spike in the closed conformation
Method: single particle / : Fernandez I, Rey FA

EMDB-53680:
Porcine hemagglutinating encephalomyelitis virus (PHEV) Spike protein in the closed conformation bound to 9-O-Ac-Sia.
Method: single particle / : Fernandez I, Rey FA

EMDB-53681:
Porcine hemagglutinating encephalomyelitis virus (PHEV) Spike protein in the 1-RBD-up conformation, bound to 9-O-Ac-Sia
Method: single particle / : Fernandez I, Rey FA

EMDB-53682:
Porcine hemagglutinating encephalomyelitis virus (PHEV) Spike protein in the 2-RBD-up conformation, bound to 9-O-Ac-Sia
Method: single particle / : Fernandez I, Rey FA

EMDB-53683:
Porcine hemagglutinating encephalomyelitis virus (PHEV) Spike protein in the open conformation, bound to 9-O-Ac-Sia
Method: single particle / : Fernandez I, Rey FA

EMDB-53684:
Local refinement of the N-terminal domain (NTD) and receptor binding domain (RBD) from the Porcine hemagglutinating encephalomyelitis virus (PHEV) Spike in the closed conformation bound to 9-O-Ac-Sia
Method: single particle / : Fernandez I, Rey FA

EMDB-53685:
Local refinement of the N-terminal domain (NTD) from the Porcine hemagglutinating encephalomyelitis virus (PHEV) Spike in the open conformation bound to 9-O-Ac-Sia
Method: single particle / : Fernandez I, Rey FA

Pages:

+
About EMN search

-
News

-
Feb 9, 2022. New format data for meta-information of EMDB entries

New format data for meta-information of EMDB entries

  • Version 3 of the EMDB header file is now the official format.
  • The previous official version 1.9 will be removed from the archive.

Related info.:EMDB header

External links:wwPDB to switch to version 3 of the EMDB data model

-
Oct 5, 2021. Nobel Prize for mechanically activated and temperature-gated ion channels

Nobel Prize for mechanically activated and temperature-gated ion channels

  • The Nobel Prize in Physiology or Medicine 2021 was awarded jointly to David Julius and Ardem Patapoutian "for their discoveries of receptors for temperature and touch."
  • EM Navigator can help to find cryo-EM structure data by both pioneers.

External links:The Nobel Prize in Physiology or Medicine 2021 - NobelPrize.org / Structure data by Ardem Patapoutian / Structure data by David Julius

+
Aug 12, 2020. Covid-19 info

Covid-19 info

URL: https://pdbj.org/emnavi/covid19.php

New page: Covid-19 featured information page in EM Navigator.

Related info.:Covid-19 info / Mar 5, 2020. Novel coronavirus structure data

+
Mar 5, 2020. Novel coronavirus structure data

Novel coronavirus structure data

Related info.:Yorodumi Speices / Aug 12, 2020. Covid-19 info

External links:COVID-19 featured content - PDBj / Molecule of the Month (242):Coronavirus Proteases

+
Jul 5, 2019. Downlodablable text data

Downlodablable text data

Some data of EM Navigator services can be downloaded as text file. Software such as Excel can load the data files.

PageDataFormat
EMN Searchsearch resultCSV, TSV, or JSON
EMN statisticsdata tableCSV or TSV

Related info.:EMN Search / EMN Statistics

-
EMN Search

3DEM data search

Advanced data search for EMDB and EM data in PDB widh various search and display options

Related info.:EMDB / PDB / EM Navigator / Q: What are the data sources of EM Navigator? / Yorodumi Search / Jul 5, 2019. Downlodablable text data

Read more