[English] 日本語
- 3DEM data search -

-
Search query


Keywords
Database /
Q: What are the data sources of EM Navigator?
Data entries / weeks ago
Q: When the data are updated?
Author
Processing method
Display mode
Sort by
Num. of entries / page
Entry
Article
Sample
Experiment
Processing
Max number of data0 for all data
File format
  • CSV format (Comma-Separated Values, for Excel, etc.)
  • TSV format (Tab Separated Values, for Excel, etc.)
  • JSON format

Yorodumi Search

-
Search result

Showing 1 - 50 of 6,464 items for (author: fan & x)

EMDB-68781:
In situ cryo sub-tomogram average of axoneme in sperm flagella from Rgs22 knockout mice
Method: subtomogram averaging / : Ye-Jun P

EMDB-70604:
Full-length LRRK2 autoinhibited
Method: single particle / : Villagran-Suarez AC, Bodrug T

EMDB-70981:
Full length LRRK2 bound to G10 DARPin
Method: single particle / : Villagran AV, Bodrug T, Leschziner A

EMDB-70982:
Full-length LRRK2 autonhibited (flexible)
Method: single particle / : Villagran-Suarez A, Bodrug T, Alegrio-Louro J, Leschziner A

EMDB-71012:
Full LRRK2 (R1441C mutant) after symmetry expansion
Method: single particle / : Villagran Suarez AC, Bodrug T

EMDB-72555:
Full length LRRK2 after symmetry expansion
Method: single particle / : Villagran Suarez AC, Bodrug T

EMDB-72556:
Full length LRRK2 (G2019S) after symmetry expansion
Method: single particle / : Villagran Suarez AC, Bodrug T

EMDB-73338:
C-terminal LRRK2 bound to C12 DARPin
Method: single particle / : Sanz-Murillo M, Leschziner A

PDB-9om2:
Full-length LRRK2 autoinhibited
Method: single particle / : Villagran-Suarez AC, Bodrug T

PDB-9oxh:
Full length LRRK2 bound to G10 DARPin
Method: single particle / : Villagran AV, Bodrug T, Leschziner A

PDB-9oxi:
Full-length LRRK2 autonhibited (flexible)
Method: single particle / : Villagran-Suarez A, Bodrug T

PDB-9oya:
Full LRRK2 (R1441C mutant) after symmetry expansion
Method: single particle / : Villagran Suarez AC, Bodrug T

PDB-9y67:
Full length LRRK2 after symmetry expansion
Method: single particle / : Villagran Suarez AC, Bodrug T

PDB-9y68:
Full length LRRK2 (G2019S) after symmetry expansion
Method: single particle / : Villagran Suarez AC, Bodrug T

PDB-9yqk:
C-terminal LRRK2 bound to C12 DARPin
Method: single particle / : Sanz-Murillo M, Leschziner A

EMDB-80401:
Cap of F2-pyocin
Method: single particle / : Gu ZW, Xie YF, Wang JW

EMDB-80402:
side fiber of F2-pyocin
Method: single particle / : Gu ZW, Xie YF, Wang JW

EMDB-80403:
F2-pyocin tail Tip
Method: single particle / : Gu ZW, Xie YF, Wang JW

EMDB-80404:
tail fiber of F2-pyocin
Method: single particle / : Gu ZW, Xie YF, Wang JW

EMDB-80538:
F2-pyocin FNIII and AHS
Method: single particle / : Gu ZW, Xie YF, Wang JW

PDB-25vd:
Cap of F2-pyocin
Method: single particle / : Gu ZW, Xie YF, Wang JW

PDB-25ve:
side fiber of F2-pyocin
Method: single particle / : Gu ZW, Xie YF, Wang JW

PDB-25vf:
F2-pyocin tail Tip
Method: single particle / : Gu ZW, Xie YF, Wang JW

PDB-25vj:
tail fiber of F2-pyocin
Method: single particle / : Gu ZW, Xie YF, Wang JW

PDB-26ci:
F2-pyocin FNIII and AHS
Method: single particle / : Gu ZW, Xie YF, Wang JW

EMDB-80806:
Structure of a human monoclonal neutralizing antibody S54 targeting Epstein-Barr virus major glycoprotein gp350
Method: single particle / : Sun C, Fang XY, Liu Z, Zeng MS

PDB-26pf:
Structure of a human monoclonal neutralizing antibody S54 targeting Epstein-Barr virus major glycoprotein gp350
Method: single particle / : Sun C, Fang XY, Liu Z, Zeng MS

EMDB-65636:
Cryo-EM structure of inhibitor E822-1968 bound human urea transporter A2.
Method: single particle / : Huang S, Sun J

EMDB-65637:
Cryo-EM structure of inhibitor M353-0039 bound urea transporter A2.
Method: single particle / : Huang S, Sun J

PDB-9w4k:
Cryo-EM structure of inhibitor E822-1968 bound human urea transporter A2.
Method: single particle / : Huang S, Sun J

PDB-9w4l:
Cryo-EM structure of inhibitor M353-0039 bound urea transporter A2.
Method: single particle / : Huang S, Sun J

EMDB-80306:
Cryo-EM Structure of PLPP3
Method: single particle / : Long T, Wu Y

EMDB-81156:
Structure of PLPP3 prepared in the presence of EDTA
Method: single particle / : Long T

PDB-25qp:
Cryo-EM Structure of PLPP3
Method: single particle / : Long T, Wu Y

EMDB-64756:
Apo SLC36A1
Method: single particle / : Zhang SS

EMDB-64757:
SLC36A1 bound to D-cycloserine
Method: single particle / : Zhang SS

EMDB-64759:
SLC36A1 bound to D-serine
Method: single particle / : Zhang SS

EMDB-64762:
SLC36A1 bound to D-NPA
Method: single particle / : Zhang SS

PDB-9v3t:
Apo SLC36A1
Method: single particle / : Zhang SS

PDB-9v3v:
SLC36A1 bound to D-cycloserine
Method: single particle / : Zhang SS

PDB-9v3x:
SLC36A1 bound to D-serine
Method: single particle / : Zhang SS

PDB-9v3z:
SLC36A1 bound to D-NPA
Method: single particle / : Zhang SS

EMDB-73392:
Cryo-EM structure of SARS-CoV-2 Omicron neutralizing antibody AB2-122 with BA.5 RBD and SP1-77 Fab complex
Method: single particle / : Jonaid G, Batra H, Kibria G, Chen B, Alt FW

EMDB-73457:
Cryo-EM structure of SARS-CoV-2 Omicron neutralizing antibody S212 with BA.5 RBD and SP1-77 Fab complex
Method: single particle / : Batra H, Zhang J, Jonaid G, Kibria G, Chen B, Alt FW

PDB-9ysg:
Cryo-EM structure of SARS-CoV-2 Omicron neutralizing antibody AB2-122 with BA.5 RBD and SP1-77 Fab complex
Method: single particle / : Jonaid G, Batra H, Kibria G, Chen B, Alt FW

PDB-9ytc:
Cryo-EM structure of SARS-CoV-2 Omicron neutralizing antibody S212 with BA.5 RBD and SP1-77 Fab complex
Method: single particle / : Batra H, Zhang J, Jonaid G, Kibria G, Chen B, Alt FW

EMDB-76249:
Apo-IP3R2 Local Refinement of Ligand Binding Domains
Method: single particle / : Serysheva II, Baker MR, Fan G

EMDB-76250:
Apo-IP3R2 Local Refinement of ARM1-HD Domains
Method: single particle / : Serysehva II, Baker MR, Fan G

EMDB-76251:
Apo-IP3R2 Local Refinement of ARM2 Domain
Method: single particle / : Serysheva II, Baker MR, Fan G

EMDB-76252:
Apo-IP3R2 Local Refinement of ARM3-ILD-LNK domains
Method: single particle / : Serysheva II, Baker MR, Fan G

Pages:

+
About EMN search

-
News

-
Feb 9, 2022. New format data for meta-information of EMDB entries

New format data for meta-information of EMDB entries

  • Version 3 of the EMDB header file is now the official format.
  • The previous official version 1.9 will be removed from the archive.

Related info.:EMDB header

External links:wwPDB to switch to version 3 of the EMDB data model

-
Oct 5, 2021. Nobel Prize for mechanically activated and temperature-gated ion channels

Nobel Prize for mechanically activated and temperature-gated ion channels

  • The Nobel Prize in Physiology or Medicine 2021 was awarded jointly to David Julius and Ardem Patapoutian "for their discoveries of receptors for temperature and touch."
  • EM Navigator can help to find cryo-EM structure data by both pioneers.

External links:The Nobel Prize in Physiology or Medicine 2021 - NobelPrize.org / Structure data by Ardem Patapoutian / Structure data by David Julius

+
Aug 12, 2020. Covid-19 info

Covid-19 info

URL: https://pdbj.org/emnavi/covid19.php

New page: Covid-19 featured information page in EM Navigator.

Related info.:Covid-19 info / Mar 5, 2020. Novel coronavirus structure data

+
Mar 5, 2020. Novel coronavirus structure data

Novel coronavirus structure data

Related info.:Yorodumi Speices / Aug 12, 2020. Covid-19 info

External links:COVID-19 featured content - PDBj / Molecule of the Month (242)：Coronavirus Proteases

+
Jul 5, 2019. Downlodablable text data

Downlodablable text data

Some data of EM Navigator services can be downloaded as text file. Software such as Excel can load the data files.

PageDataFormat
EMN Searchsearch resultCSV, TSV, or JSON
EMN statisticsdata tableCSV or TSV

Related info.:EMN Search / EMN Statistics

-
EMN Search

3DEM data search

Advanced data search for EMDB and EM data in PDB widh various search and display options

Related info.:EMDB / PDB / EM Navigator / Q: What are the data sources of EM Navigator? / Yorodumi Search / Jul 5, 2019. Downlodablable text data

Read more