[English] 日本語
- 3DEM data search -

-
Search query


Keywords
Database /
Q: What are the data sources of EM Navigator?
Data entries / weeks ago
Q: When the data are updated?
Author
Processing method
Display mode
Sort by
Num. of entries / page
Entry
Article
Sample
Experiment
Processing
Max number of data0 for all data
File format
  • CSV format (Comma-Separated Values, for Excel, etc.)
  • TSV format (Tab Separated Values, for Excel, etc.)
  • JSON format

Yorodumi Search

-
Search result

Showing all 43 items for (author: edwards & lv)

EMDB-19566:
Human OCCM DNA licensing intermediate
Method: single particle / : Wells JN, Leber V, Edwards LV, Allyjaun S, Peach M, Tomkins J, Kefala-Stavridi A, Faull SV, Aramayo R, Pestana CM, Ranjha L, Speck C

EMDB-16453:
SARS-CoV-2 Omicron Variant Spike Trimer in complex with three 17T2 Fabs
Method: single particle / : Modrego A, Carlero D, Bueno-Carrasco MT, Santiago C, Carolis C, Arranz R, Blanco J, Magri G

EMDB-16473:
SARS-CoV-2 spike in complex with the 17T2 neutralizing antibody Fab fragment (local refinement of RBD and Fab)
Method: single particle / : Modrego A, Carlero D, Bueno-Carrasco MT, Santiago C, Carolis C, Arranz R, Blanco J, Magri G

PDB-8c89:
SARS-CoV-2 spike in complex with the 17T2 neutralizing antibody Fab fragment (local refinement of RBD and Fab)
Method: single particle / : Modrego A, Carlero D, Bueno-Carrasco MT, Santiago C, Carolis C, Arranz R, Blanco J, Magri G

EMDB-11847:
Organisation of a helical Bunyamwera virus ribonucleoprotein
Method: single particle / : Hopkins FR, Fontana J

EMDB-11849:
Asymmetric reconstruction of a native Bunyamwera virus ribonucleoprotein
Method: single particle / : Hopkins FR, Fontana J, Barr JN

PDB-7aoy:
Helical arrangement of Bunyamwera virus nucleocapsid protein within a native ribonucleoprotein
Method: single particle / : Hopkins FR, Fontana J, Barr JN

EMDB-23400:
SARS-CoV-2 Spike Protein Trimer bound to DH1043 fab
Method: single particle / : Gobeil S, Acharya P

EMDB-23246:
CryoEM map of SARS-CoV-2 S protein in complex with Receptor Binding Domain antibody DH1041
Method: single particle / : Manne K, Acharya P

EMDB-23248:
CryoEM map of SARS-CoV-2 S protein in complex with N-terminal domain antibody DH1052
Method: single particle / : Manne K, Acharya P

EMDB-23277:
CryoEM map of SARS-CoV-2 S protein in complex with N-terminal domain antibody DH1050.1
Method: single particle / : Manne K, Acharya P

EMDB-23279:
CryoEM map of SARS-CoV-2 S protein in complex with Receptor Binding Domain antibody DH1047
Method: single particle / : Manne K, Acharya P

EMDB-11997:
Structure of a nanoparticle for a COVID-19 vaccine candidate
Method: single particle / : Duyvesteyn HME, Stuart DI

PDB-7b3y:
Structure of a nanoparticle for a COVID-19 vaccine candidate
Method: single particle / : Duyvesteyn HME, Stuart DI

EMDB-22929:
Negative stain electron microscopy structure of RBD-directed Fab DH1044 in complex with 2P SARS-CoV-2 spike ectodomain
Method: single particle / : Edwards RJ, Mansouri K

EMDB-22930:
Negative stain electron microscopy reconstruction of cross-reactive RBD-directed Fab DH1045 complexed with hexapro SARS-CoV-2 spike ectodomain
Method: single particle / : Edwards RJ, Mansouri K

EMDB-22933:
Negative stain electro microscopy reconstruction of cross-reactive RBD-directed Fab DH1047 in complex with hexapro SARS-CoV-2 spike ectodomain
Method: single particle / : Edwards RJ, Mansouri K

EMDB-22936:
Negative stain electron microscopy reconstruction of NTD-directed neutralizing antibody Fab DH1048 in complex with hexapro SARS-CoV-2 spike ectodomain
Method: single particle / : Edwards RJ, Mansouri K

EMDB-22942:
Negative stain electron microscopy reconstruction of NTD-directed neutralizing antibody Fab DH1049 in complex with 2P SARS-CoV-2 spike ectodomain
Method: single particle / : Edwards RJ, Mansouri K

EMDB-22944:
Negative stain electron microscopy reconstruction of NTD-directed Fab DH1050.1 in complex with hexapro SARS-CoV-2 spike ectodomain
Method: single particle / : Edwards RJ, Mansouri K

EMDB-22945:
Negative stain electron microscopy reconstruction of neutralizing NTD-directed Fab DH1050.2 in complex with 2P SARS-CoV-2 spike ectodomain
Method: single particle / : Edwards RJ, Mansouri K

EMDB-22946:
Negative stain electron microscopy reconstruction of neutralizing NTD-directed Fab DH1051 in complex with 2P SARS-CoV-2 spike ectodomain
Method: single particle / : Edwards RJ, Mansouri K

EMDB-22947:
Negative stain electron microscopy reconstruction of non-neutralizing NTD-directed antibody Fab in complex with SARS-CoV-2 spike ectodomain in the 1-RBD-up state
Method: single particle / : Edwards RJ, Mansouri K

EMDB-22948:
Negative stain electron microscopy reconstruction of non-neutralizing NTD-directed antibody Fab DH1053 in complex with SARS-CoV-2 spike ectodomain in the 3-RBD-down state
Method: single particle / : Edwards RJ, Mansouri K

EMDB-22951:
Negative stain electron microscopy reconstruction of non-neutralizing NTD-directed Fab DH1054 in complex with 2P SARS-CoV-2 spike ectodomain
Method: single particle / : Edwards RJ, Mansouri K

EMDB-22952:
Negative stain electron microscopy reconstruction of non-neutralizing NTD-directed Fab DH1055 in complex with 2P SARS-CoV-2 spike ectodomain
Method: single particle / : Edwards RJ, Mansouri K

EMDB-22953:
Negative stain electron microscopy of non-neutralizing NTD-directed Fab DH1056 in complex with 2P SARS-CoV-2 spike ectodomain
Method: single particle / : Edwards RJ, Mansouri K

EMDB-22955:
Negative stain electron microscopy reconstruction of 2P SARS-CoV-2 spike ectodomain in complex with Fabs DH1043 and DH1051
Method: single particle / : Edwards RJ, Mansouri K

EMDB-22956:
Negative stain electron microscopy reconstruction of 2P SARS-CoV-2 spike ectodomain in complex with Fabs DH1041 and DH1051
Method: single particle / : Edwards RJ, Mansouri K

EMDB-22957:
Negative stain electron microscopy of 2P SARS-CoV-2 spike ectodomain in complex with Fabs DH1043 and DH1047
Method: single particle / : Edwards RJ, Mansouri K

EMDB-22958:
Negative stain electron microscopy reconstruction of 2P SARS-CoV-2 spike ectodomain in complex with Fabs DH1047 and DH1051
Method: single particle / : Edwards RJ, Mansouri K

EMDB-22969:
Negative stain electron microscopy reconstruction of 2P SARS-CoV-2 spike ectodomain in complex with Fabs DH1045 and DH1050.1
Method: single particle / : Edwards RJ, Mansouri K

EMDB-22970:
Negative stain electron microscopy of 2P SARS-CoV-2 spike ectodomain in complex with Fabs DH1043 and DH1050.1
Method: single particle / : Edwards RJ, Mansouri K

EMDB-22971:
Negative stain electron microscopy reconstruction of 2P SARS-CoV-2 spike ectodomain in complex with Fabs DH1041 and DH1047
Method: single particle / : Edwards RJ, Mansouri K

EMDB-22984:
Negative stain electron microscopy reconstruction of 2P SARS-CoV-2 spike ectodomain in complex with Fabs DH1050.1 and DH1053
Method: single particle / : Edwards RJ, Mansouri K

EMDB-22985:
Negative stain electron microscopy reconstruction of 2P SARS-CoV-2 spike ectodomain in complex with Fabs DH1043, DH1047, and DH1050.1
Method: single particle / : Edwards RJ, Mansouri K

EMDB-22986:
Negative stain electron microscopy reconstruction of 2P SARS-CoV-2 spike ectodomain in complex with Fabs DH1043, DH1047, and DH1051
Method: single particle / : Edwards RJ, Mansouri K

EMDB-22920:
Negative stain electron microscopy structure of RBD-directed Fab DH1041 in complex with hexapro SARS-CoV-2 spike
Method: single particle / : Edwards RJ, Mansouri K

EMDB-22921:
Negative stain electron microscopy reconstruction of RBD-directed Fab DH1042 in complex with 2P SARS-CoV-2 spike ectodomain
Method: single particle / : Edwards RJ, Mansouri K

EMDB-22923:
Negative stain electron microscopy reconstruction of Fab DH1043 in complex with hexapro SARS-CoV-2 spike ectodomain
Method: single particle / : Edwards RJ, Mansouri K

EMDB-10723:
OP protein cage
Method: single particle / : Edwardson TGW, Tetter S, Hilvert D

EMDB-10724:
OP protein cage, complex 1
Method: single particle / : Edwardson TGW, Tetter S, Hilvert D

EMDB-10725:
OP protein cage, complex 2
Method: single particle / : Edwardson TGW, Tetter S, Hilvert D

+
About EMN search

-
News

-
Feb 9, 2022. New format data for meta-information of EMDB entries

New format data for meta-information of EMDB entries

  • Version 3 of the EMDB header file is now the official format.
  • The previous official version 1.9 will be removed from the archive.

Related info.:EMDB header

External links:wwPDB to switch to version 3 of the EMDB data model

-
Oct 5, 2021. Nobel Prize for mechanically activated and temperature-gated ion channels

Nobel Prize for mechanically activated and temperature-gated ion channels

  • The Nobel Prize in Physiology or Medicine 2021 was awarded jointly to David Julius and Ardem Patapoutian "for their discoveries of receptors for temperature and touch."
  • EM Navigator can help to find cryo-EM structure data by both pioneers.

External links:The Nobel Prize in Physiology or Medicine 2021 - NobelPrize.org / Structure data by Ardem Patapoutian / Structure data by David Julius

+
Aug 12, 2020. Covid-19 info

Covid-19 info

URL: https://pdbj.org/emnavi/covid19.php

New page: Covid-19 featured information page in EM Navigator.

Related info.:Covid-19 info / Mar 5, 2020. Novel coronavirus structure data

+
Mar 5, 2020. Novel coronavirus structure data

Novel coronavirus structure data

Related info.:Yorodumi Speices / Aug 12, 2020. Covid-19 info

External links:COVID-19 featured content - PDBj / Molecule of the Month (242)：Coronavirus Proteases

+
Jul 5, 2019. Downlodablable text data

Downlodablable text data

Some data of EM Navigator services can be downloaded as text file. Software such as Excel can load the data files.

PageDataFormat
EMN Searchsearch resultCSV, TSV, or JSON
EMN statisticsdata tableCSV or TSV

Related info.:EMN Search / EMN Statistics

-
EMN Search

3DEM data search

Advanced data search for EMDB and EM data in PDB widh various search and display options

Related info.:EMDB / PDB / EM Navigator / Q: What are the data sources of EM Navigator? / Yorodumi Search / Jul 5, 2019. Downlodablable text data

Read more