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Showing all 43 items for (author: dong & yy)

EMDB-37849:
Cryo-EM structure of CB1-beta-arrestin1 complex
Method: single particle / : Liao Y, Zhang H, Shen Q, Cai C

EMDB-16791:
Photorhabdus luminescens TcdA1 prepore-to-pore intermediate, K1179W mutant
Method: single particle / : Nganga PN, Roderer D, Belyy A, Prumbaum D, Raunser S

EMDB-16792:
Photorhabdus luminescens TcdA1 prepore-to-pore intermediate, K567W K2008W mutant
Method: single particle / : Nganga PN, Roderer D, Belyy A, Prumbaum D, Raunser S

EMDB-16793:
Photorhabdus luminescens TcdA1 prepore-to-pore intermediate, C16S, C20S, C870S, T1279C mutant
Method: single particle / : Nganga PN, Roderer D, Belyy A, Prumbaum D, Raunser S

EMDB-40976:
Cryo-EM structure of mink variant Y453F trimeric spike protein bound to two mink ACE2 receptors
Method: single particle / : Ahn HM, Calderon B, Fan X, Gao Y, Horgan N, Zhou B, Liang B

EMDB-40977:
Cryo-EM structure of mink variant Y453F trimeric spike protein
Method: single particle / : Ahn HM, Calderon B, Fan X, Gao Y, Horgan N, Zhou B, Liang B

EMDB-40978:
Cryo-EM structure of mink variant Y453F trimeric spike protein bound to one mink ACE2 receptors at downRBD conformation
Method: single particle / : Ahn HM, Calderon B, Fan X, Gao Y, Horgan N, Zhou B, Liang B

EMDB-40979:
Cryo-EM structure of the RBD-ACE2 interface of the SARS-CoV-2 trimeric spike protein bound to ACE2 receptor after local refinement at upRBD conformation
Method: single particle / : Ahn HM, Calderon B, Fan X, Gao Y, Horgan N, Zhou B, Liang B

EMDB-40980:
Cryo-EM structure of the RBD-ACE2 interface of the SARS-CoV-2 trimeric spike protein bound to ACE2 receptor after local refinement at downRBD conformation.
Method: single particle / : Ahn HM, Calderon B, Fan X, Gao Y, Horgan N, Zhou B, Liang B

EMDB-41143:
Cryo-EM structure of mink variant Y453F trimeric spike protein bound to one mink ACE2 receptors
Method: single particle / : Ahn HM, Calderon B, Fan X, Gao Y, Horgan N, Liang B

PDB-8t20:
Cryo-EM structure of mink variant Y453F trimeric spike protein bound to two mink ACE2 receptors
Method: single particle / : Ahn HM, Calderon B, Fan X, Gao Y, Horgan N, Zhou B, Liang B

PDB-8t21:
Cryo-EM structure of mink variant Y453F trimeric spike protein
Method: single particle / : Ahn HM, Calderon B, Fan X, Gao Y, Horgan N, Zhou B, Liang B

PDB-8t22:
Cryo-EM structure of mink variant Y453F trimeric spike protein bound to one mink ACE2 receptors at downRBD conformation
Method: single particle / : Ahn HM, Calderon B, Fan X, Gao Y, Horgan N, Zhou B, Liang B

PDB-8t23:
Cryo-EM structure of the RBD-ACE2 interface of the SARS-CoV-2 trimeric spike protein bound to ACE2 receptor after local refinement at upRBD conformation
Method: single particle / : Ahn HM, Calderon B, Fan X, Gao Y, Horgan N, Zhou B, Liang B

PDB-8t25:
Cryo-EM structure of the RBD-ACE2 interface of the SARS-CoV-2 trimeric spike protein bound to ACE2 receptor after local refinement at downRBD conformation.
Method: single particle / : Ahn HM, Calderon B, Fan X, Gao Y, Horgan N, Zhou B, Liang B

PDB-8taz:
Cryo-EM structure of mink variant Y453F trimeric spike protein bound to one mink ACE2 receptors
Method: single particle / : Ahn HM, Calderon B, Fan X, Gao Y, Horgan N, Liang B

EMDB-34259:
cryo-EM structure of Omicron BA.5 S protein in complex with XGv282
Method: single particle / : Xia XY, Zhang YY, Chi XM, Huang BD, Wu LS, Zhou Q

EMDB-34260:
Cryo-EM map of Omicron BA.5 S protein in complex with XGv282 focused on RBD_XGv282 sub-complex
Method: single particle / : Xia LY, Zhang YY, Zhou Q

EMDB-34261:
cryo-EM structure of Omicron BA.5 S protein in complex with XGv289
Method: single particle / : Xia XY, Zhang YY, Chi XM, Huang BD, Wu LS, Zhou Q

EMDB-34262:
Cryo-EM map of Omicron BA.5 S protein in complex with XGv289 focused on RBD_XGv289 sub-complex
Method: single particle / : Xia LY, Zhang YY, Zhou Q

EMDB-34263:
cryo-EM structure of Omicron BA.5 S protein in complex with S2L20
Method: single particle / : Xia XY, Zhang YY, Chi XM, Huang BD, Wu LS, Zhou Q

EMDB-34264:
Cryo-EM map of Omicron BA.5 S protein in complex with S2L20 focused on NTD_S2L20 sub-complex
Method: single particle / : Xia LY, Zhang YY, Zhou Q

EMDB-33489:
Cryo-EM structure of human DICER-pre-miRNA in a dicing state
Method: single particle / : Lee H, Roh SH

EMDB-33490:
Cryo-EM structure of an apo-form of human DICER
Method: single particle / : Lee H, Roh SH

EMDB-30947:
Cryo EM structure of a Na+-bound Na+,K+-ATPase in the E1 state
Method: single particle / : Guo YY, Zhang YY, Yan RH, Huang BD, Ye FF, Wu LS, Chi XM, Zhou Q

EMDB-30948:
Cryo EM structure of a K+-bound Na+,K+-ATPase in the E2 state
Method: single particle / : Guo YY, Zhang YY, Yan RH, Huang BD, Ye FF, Wu LS, Chi XM, Zhou Q

EMDB-30949:
Cryo EM structure of a Na+-bound Na+,K+-ATPase in the E1 state with ATP-gamma-S
Method: single particle / : Guo YY, Zhang YY, Yan RH, Huang BD, Ye FF, Wu LS, Chi XM, Zhou Q

EMDB-32869:
S protein of Delta variant in complex with ZWD12
Method: single particle / : Guo YY, Zhang YY, Zhou Q

EMDB-32870:
S protein of Delta variant in complex with ZWD12 focused on RBD_ZWD12 sub-complex
Method: single particle / : Guo YY, Zhang YY

EMDB-32871:
S protein of Delta variant in complex with ZWC6
Method: single particle / : Guo YY, Zhang YY, Zhou Q

EMDB-32872:
S protein of Delta variant in complex with ZWC6 focused on RBD_ZWC6 sub-complex
Method: single particle / : Guo YY, Zhang YY

EMDB-12566:
Structure of human excitatory amino acid transporter 3 (EAAT3) in complex with HIP-B
Method: single particle / : Baronina A, Pike ACW

EMDB-32920:
S protein of SARS-CoV-2 in complex with 2G1
Method: single particle / : Guo YY, Zhang YY

EMDB-32921:
S protein of SARS-CoV-2 in complex with 2G1 focused on RBD_2G1 sub-complex
Method: single particle / : Guo YY, Zhang YY

EMDB-30650:
Cryo-EM structure of the Ams1 and Nbr1 complex
Method: single particle / : Zhang J, Ye K

EMDB-30652:
Cryo-EM structure of the Ape4 and Nbr1 complex
Method: single particle / : Zhang J, Ye K

EMDB-30622:
Cryo-EM structure of amyloid fibril formed by human RIPK3
Method: helical / : Zhao K, Ma YY

EMDB-30276:
cryo EM map of the S protein of SARS-CoV-2 in complex bound with 4A8
Method: single particle / : Yan RH, Zhang YY

EMDB-30277:
Cryo EM map of the interface between NTD of SARS-CoV-2 and 4A8
Method: single particle / : Yan RH, Zhang YY, Guo YY, Li YN, Xia L, Zhou Q

EMDB-9187:
Cryo-EM structure of the human neutral amino acid transporter ASCT2
Method: single particle / : Yu X, Han S

EMDB-9188:
Cryo-EM structure of the human neutral amino acid transporter ASCT2
Method: single particle / : Yu X, Han S

EMDB-5289:
The cryo-EM map of DegQ 24-mer
Method: single particle / : Bai XC, Wang XJ, Ye YY, Pan XJ, Chang LF, Leng D, Sui SF

EMDB-5290:
The cryo-EM map of DegQ 12-mer
Method: single particle / : Bai XC, Wang XJ, Ye YY, Pan XJ, Chang LF, Leng D, Sui SF

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Feb 9, 2022. New format data for meta-information of EMDB entries

New format data for meta-information of EMDB entries

  • Version 3 of the EMDB header file is now the official format.
  • The previous official version 1.9 will be removed from the archive.

Related info.:EMDB header

External links:wwPDB to switch to version 3 of the EMDB data model

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Oct 5, 2021. Nobel Prize for mechanically activated and temperature-gated ion channels

Nobel Prize for mechanically activated and temperature-gated ion channels

  • The Nobel Prize in Physiology or Medicine 2021 was awarded jointly to David Julius and Ardem Patapoutian "for their discoveries of receptors for temperature and touch."
  • EM Navigator can help to find cryo-EM structure data by both pioneers.

External links:The Nobel Prize in Physiology or Medicine 2021 - NobelPrize.org / Structure data by Ardem Patapoutian / Structure data by David Julius

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Aug 12, 2020. Covid-19 info

Covid-19 info

URL: https://pdbj.org/emnavi/covid19.php

New page: Covid-19 featured information page in EM Navigator.

Related info.:Covid-19 info / Mar 5, 2020. Novel coronavirus structure data

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Mar 5, 2020. Novel coronavirus structure data

Novel coronavirus structure data

Related info.:Yorodumi Speices / Aug 12, 2020. Covid-19 info

External links:COVID-19 featured content - PDBj / Molecule of the Month (242)：Coronavirus Proteases

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Jul 5, 2019. Downlodablable text data

Downlodablable text data

Some data of EM Navigator services can be downloaded as text file. Software such as Excel can load the data files.

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Related info.:EMN Search / EMN Statistics

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Related info.:EMDB / PDB / EM Navigator / Q: What are the data sources of EM Navigator? / Yorodumi Search / Jul 5, 2019. Downlodablable text data

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