[English] 日本語
- 3DEM data search -

-
Search query


Keywords
Database /
Q: What are the data sources of EM Navigator?
Data entries / weeks ago
Q: When the data are updated?
Author
Processing method
Display mode
Sort by
Num. of entries / page
Entry
Article
Sample
Experiment
Processing
Max number of data0 for all data
File format
  • CSV format (Comma-Separated Values, for Excel, etc.)
  • TSV format (Tab Separated Values, for Excel, etc.)
  • JSON format

Yorodumi Search

-
Search result

Showing all 29 items for (author: chramiec-glabik & a)

EMDB-50108:
Medium-resolution cryo-EM structure of the Danio rerio tRNA ligase complex
Method: single particle / : Chamera S, Zajko W, Czarnocki-Cieciura M, Jaciuk M, Koziej L, Nowak J, Wycisk K, Sroka M, Chramec-Glabik A, Smietanski M, Golebiowski F, Warminski M, Jemielity J, Glatt S, Nowotny M

EMDB-52744:
Cryo-EM structure of the Danio rerio tRNA ligase complex
Method: single particle / : Chamera S, Zajko W, Czarnocki-Cieciura M, Jaciuk M, Koziej L, Nowak J, Wycisk K, Sroka M, Chramiec-Glabik A, Smietanski M, Golebiowski F, Warminski M, Jemielity J, Glatt S, Nowotny M

PDB-9i8v:
Cryo-EM structure of the Danio rerio tRNA ligase complex
Method: single particle / : Chamera S, Zajko W, Czarnocki-Cieciura M, Jaciuk M, Koziej L, Nowak J, Wycisk K, Sroka M, Chramiec-Glabik A, Smietanski M, Golebiowski F, Warminski M, Jemielity J, Glatt S, Nowotny M

EMDB-16950:
cryo-EM structure of human tRNA(AspGUC)
Method: single particle / : Biela AP

EMDB-16917:
Human apo pseudouridine synthase 3 (PUS3)
Method: single particle / : Lin TY, Glatt S, Koziej L

EMDB-16926:
Human pseudouridine synthase 3 and tRNA-Gln
Method: single particle / : Lin TY, Glatt S

EMDB-19830:
Human pseudouridine synthase 3 (PUS3 R116A mutant) and two tRNA-Gln
Method: single particle / : Lin TY, Jezowski J, Glatt S

EMDB-19831:
Human pseudouridine synthase 3 (PUS3 R116A mutant) and one tRNA-Gln
Method: single particle / : Lin TY, Jezowski J, Glatt S

EMDB-19832:
Human pseudouridine synthase 3 (PUS3 D118A mutant) and two tRNA-Arg
Method: single particle / : Lin TY, Jezowski J, Glatt S

EMDB-19833:
Human pseudouridine synthase 3 (PUS3 D118A mutant) and two pre-tRNA-Arg
Method: single particle / : Lin TY, Jezowski J, Glatt S

EMDB-19834:
Human pseudouridine synthase 3 (PUS3 R116A mutant)
Method: single particle / : Lin TY, Glatt S

EMDB-19835:
Human pseudouridine synthase 3 (PUS3 K119A mutant)
Method: single particle / : Lin TY, Glatt S

EMDB-19836:
Human pseudouridine synthase 3 (wild type)
Method: single particle / : Lin TY, Glatt S

EMDB-17924:
Cryo-EM structure of human Elp123 in complex with tRNA, acetyl-CoA, 5'-deoxyadenosine and methionine
Method: single particle / : Abbassi N, Jaciuk M, Lin TY, Glatt S

EMDB-17925:
Cryo-EM structure of human Elp123 in complex with 5'-deoxyadenosine and methionine
Method: single particle / : Abbassi N, Jaciuk M, Lin TY, Glatt S

EMDB-17926:
Cryo-EM structure of human Elp123 in complex with tRNA, S-ethyl-CoA, 5'-deoxyadenosine and methionine
Method: single particle / : Abbassi N, Jaciuk M, Lin TY, Glatt S

EMDB-17927:
Cryo-EM structure of human Elp123 in complex with tRNA, desulpho-CoA, 5'-deoxyadenosine and methionine
Method: single particle / : Abbassi N, Jaciuk M, Lin TY, Glatt S

EMDB-15622:
Cryo-EM structure of yeast Elongator complex
Method: single particle / : Jaciuk M, Scherf D, Kaszuba K, Gaik M, Koscielniak A, Krutyholowa R, Rawski M, Indyka P, Biela A, Dobosz D, Lin TY, Abbassi N, Hammermeister A, Chramiec-Glabik A, Kosinski J, Schaffrath R, Glatt S

EMDB-15623:
Cryo-EM structure of yeast Elp123 in complex with alanine tRNA
Method: single particle / : Jaciuk M, Scherf D, Kaszuba K, Gaik M, Koscielniak A, Krutyholowa R, Rawski M, Indyka P, Biela A, Dobosz D, Lin TY, Abbassi N, Hammermeister A, Chramiec-Glabik A, Kosinski J, Schaffrath R, Glatt S

EMDB-15625:
Cryo-EM structure of mouse Elp123 in complex with alanine tRNA
Method: single particle / : Jaciuk M, Scherf D, Kaszuba K, Gaik M, Koscielniak A, Krutyholowa R, Rawski M, Indyka P, Biela A, Dobosz D, Lin TY, Abbassi N, Hammermeister A, Chramiec-Glabik A, Kosinski J, Schaffrath R, Glatt S

EMDB-15626:
Cryo-EM structure of mouse Elongator complex
Method: single particle / : Jaciuk M, Scherf D, Kaszuba K, Gaik M, Koscielniak A, Krutyholowa R, Rawski M, Indyka P, Biela A, Dobosz D, Lin TY, Abbassi N, Hammermeister A, Chramiec-Glabik A, Kosinski J, Schaffrath R, Glatt S

EMDB-15635:
Cryo-EM structure of yeast Elp456 subcomplex
Method: single particle / : Jaciuk M, Scherf D, Kaszuba K, Gaik M, Koscielniak A, Krutyholowa R, Rawski M, Indyka P, Biela A, Dobosz D, Lin TY, Abbassi N, Hammermeister A, Chramiec-Glabik A, Kosinski J, Schaffrath R, Glatt S

EMDB-15682:
Cryo-EM structure of mouse Elp123 with bound SAM
Method: single particle / : Jaciuk M, Scherf D, Kaszuba K, Gaik M, Koscielniak A, Krutyholowa R, Rawski M, Indyka P, Biela A, Dobosz D, Lin TY, Abbassi N, Hammermeister A, Chramiec-Glabik A, Kosinski J, Schaffrath R, Glatt S

PDB-8asv:
Cryo-EM structure of yeast Elongator complex
Method: single particle / : Jaciuk M, Scherf D, Kaszuba K, Gaik M, Koscielniak A, Krutyholowa R, Rawski M, Indyka P, Biela A, Dobosz D, Lin TY, Abbassi N, Hammermeister A, Chramiec-Glabik A, Kosinski J, Schaffrath R, Glatt S

PDB-8asw:
Cryo-EM structure of yeast Elp123 in complex with alanine tRNA
Method: single particle / : Jaciuk M, Scherf D, Kaszuba K, Gaik M, Koscielniak A, Krutyholowa R, Rawski M, Indyka P, Biela A, Dobosz D, Lin TY, Abbassi N, Hammermeister A, Chramiec-Glabik A, Kosinski J, Schaffrath R, Glatt S

PDB-8at6:
Cryo-EM structure of yeast Elp456 subcomplex
Method: single particle / : Jaciuk M, Scherf D, Kaszuba K, Gaik M, Koscielniak A, Krutyholowa R, Rawski M, Indyka P, Biela A, Dobosz D, Lin TY, Abbassi N, Hammermeister A, Chramiec-Glabik A, Kosinski J, Schaffrath R, Glatt S

PDB-8avg:
Cryo-EM structure of mouse Elp123 with bound SAM
Method: single particle / : Jaciuk M, Scherf D, Kaszuba K, Gaik M, Koscielniak A, Krutyholowa R, Rawski M, Indyka P, Biela A, Dobosz D, Lin TY, Abbassi N, Hammermeister A, Chramiec-Glabik A, Kosinski J, Schaffrath R, Glatt S

EMDB-14626:
Human elongator Elp456 subcomplex
Method: single particle / : Gaik M, Glatt S

EMDB-14627:
Murine Elongator Elp456 subcomplex
Method: single particle / : Gaik M, Glatt S

+
About EMN search

-
News

-
Feb 9, 2022. New format data for meta-information of EMDB entries

New format data for meta-information of EMDB entries

  • Version 3 of the EMDB header file is now the official format.
  • The previous official version 1.9 will be removed from the archive.

Related info.:EMDB header

External links:wwPDB to switch to version 3 of the EMDB data model

-
Oct 5, 2021. Nobel Prize for mechanically activated and temperature-gated ion channels

Nobel Prize for mechanically activated and temperature-gated ion channels

  • The Nobel Prize in Physiology or Medicine 2021 was awarded jointly to David Julius and Ardem Patapoutian "for their discoveries of receptors for temperature and touch."
  • EM Navigator can help to find cryo-EM structure data by both pioneers.

External links:The Nobel Prize in Physiology or Medicine 2021 - NobelPrize.org / Structure data by Ardem Patapoutian / Structure data by David Julius

+
Aug 12, 2020. Covid-19 info

Covid-19 info

URL: https://pdbj.org/emnavi/covid19.php

New page: Covid-19 featured information page in EM Navigator.

Related info.:Covid-19 info / Mar 5, 2020. Novel coronavirus structure data

+
Mar 5, 2020. Novel coronavirus structure data

Novel coronavirus structure data

Related info.:Yorodumi Speices / Aug 12, 2020. Covid-19 info

External links:COVID-19 featured content - PDBj / Molecule of the Month (242)：Coronavirus Proteases

+
Jul 5, 2019. Downlodablable text data

Downlodablable text data

Some data of EM Navigator services can be downloaded as text file. Software such as Excel can load the data files.

PageDataFormat
EMN Searchsearch resultCSV, TSV, or JSON
EMN statisticsdata tableCSV or TSV

Related info.:EMN Search / EMN Statistics

-
EMN Search

3DEM data search

Advanced data search for EMDB and EM data in PDB widh various search and display options

Related info.:EMDB / PDB / EM Navigator / Q: What are the data sources of EM Navigator? / Yorodumi Search / Jul 5, 2019. Downlodablable text data

Read more