[English] 日本語
- 3DEM data search -

-
Search query


Keywords
Database /
Q: What are the data sources of EM Navigator?
Data entries / weeks ago
Q: When the data are updated?
Author
Processing method
Display mode
Sort by
Num. of entries / page
Entry
Article
Sample
Experiment
Processing
Max number of data0 for all data
File format
  • CSV format (Comma-Separated Values, for Excel, etc.)
  • TSV format (Tab Separated Values, for Excel, etc.)
  • JSON format

Yorodumi Search

-
Search result

Showing 1 - 50 of 6,836 items for (author: cho & c)

EMDB-55239:
CryoEM structure of transcribing RNA polymerase II elongation complex with ATP and Elf1
Method: single particle / : Yi G, Li Q, Wang D, Zhang P

EMDB-55240:
CryoEM structure of transcribing RNA polymerase II elongation complex with ATP and Elf1_3D classification map containing the complete nucleic acid scaffold
Method: single particle / : Yi G, Li Q, Wang D, Zhang P

PDB-9sv6:
CryoEM structure of transcribing RNA polymerase II elongation complex with ATP and Elf1
Method: single particle / : Yi G, Li Q, Wang D, Zhang P

EMDB-71994:
Cryo-EM structure of NapA, the periplasmic nitrate reductase from Campylobacter jejuni
Method: single particle / : Thach T, Subramanian R

PDB-9pxt:
Cryo-EM structure of NapA, the periplasmic nitrate reductase from Campylobacter jejuni
Method: single particle / : Thach T, Subramanian R

EMDB-65945:
Consensus map of pocket engineered OR52cs in its active state
Method: single particle / : Choi CW, Choi HJ

EMDB-65946:
Focused map of pocket engineered OR52cs in its active state
Method: single particle / : Choi CW, Choi HJ

EMDB-65947:
Cryo-EM structure of pocket engineered OR52cs in its active state
Method: single particle / : Choi CW, Choi HJ

PDB-9wg4:
Cryo-EM structure of pocket engineered OR52cs in its active state
Method: single particle / : Choi CW, Choi HJ

EMDB-66444:
Pseudomonas aeruginosa (PAO1) Outer membrane PilQ (Secretin) in C1 symmetry
Method: single particle / : Kwon O, Lee Y, Ryu B, Yoo Y, Chung J, Cho H

EMDB-66445:
Pseudomonas aeruginosa (PAO1) Outer membrane PilQ (Secretin) with SlkB in C1 symmetry
Method: single particle / : Kwon O, Lee Y, Ryu B, Yoo Y, Chung J, Cho H

EMDB-66446:
Pseudomonas aeruginosa (PAO1) Outer membrane PilQ (Secretin) with SlkA in C1 symmetry
Method: single particle / : Kwon O, Lee Y, Ryu B, Yoo Y, Chung J, Cho H

EMDB-66447:
Pseudomonas aeruginosa (PAO1) Outer membrane PilQ (Secretin) in C14 symmetry
Method: single particle / : Kwon O, Lee Y, Ryu B, Yoo Y, Chung J, Cho H

EMDB-66448:
Pseudomonas aeruginosa (PAO1) Outer membrane PilQ (Secretin) with SlkB in C14 symmetry
Method: single particle / : Kwon O, Lee Y, Ryu B, Yoo Y, Chung J, Cho H

EMDB-66449:
Pseudomonas aeruginosa (PAO1) Outer membrane PilQ (Secretin) with SlkA in C14 symmetry
Method: single particle / : Kwon O, Lee Y, Ryu B, Yoo Y, Chung J, Cho H

PDB-9x0w:
Pseudomonas aeruginosa (PAO1) Outer membrane PilQ (Secretin) in C14 symmetry
Method: single particle / : Kwon O, Lee Y, Ryu B, Yoo Y, Chung J, Cho H

PDB-9x0x:
Pseudomonas aeruginosa (PAO1) Outer membrane PilQ (Secretin) with SlkB in C14 symmetry
Method: single particle / : Kwon O, Lee Y, Ryu B, Yoo Y, Chung J, Cho H

PDB-9x0y:
Pseudomonas aeruginosa (PAO1) Outer membrane PilQ (Secretin) with SlkA in C14 symmetry
Method: single particle / : Kwon O, Lee Y, Ryu B, Yoo Y, Chung J, Cho H

EMDB-72972:
AM12-340 Fab in complex with HIV-1 Env 5MUT-3fill SOSIP
Method: single particle / : Gristick HB, Gavor E, Bjorkman PJ

PDB-9yhs:
AM12-340 Fab in complex with HIV-1 Env 5MUT-3fill SOSIP
Method: single particle / : Gristick HB, Gavor E, Bjorkman PJ

EMDB-71877:
Insulin receptor bound to S961
Method: single particle / : Vogel A, Blakely A, Hill CP

EMDB-71878:
Insulin Receptor bound to Ins-AC-S2
Method: single particle / : Vogel A, Hill CP, Blakely A

EMDB-71894:
Novel site 1 interaction of the IR/Ins-AC-S2 complex
Method: single particle / : Vogel A, Blakely A, Hill CP

PDB-9puv:
Insulin receptor bound to S961
Method: single particle / : Vogel A, Blakely A, Hill CP

PDB-9puw:
Insulin Receptor bound to Ins-AC-S2
Method: single particle / : Vogel A, Hill CP, Blakely A

PDB-9pvo:
Novel site 1 interaction of the IR/Ins-AC-S2 complex
Method: single particle / : Vogel A, Blakely A, Hill CP

EMDB-56598:
XBP1u-stalled RPL4 RNC in complex with NAC
Method: single particle / : Santos J, Guennigmann M, Gora RJ, Iljina M, Predin M, Kotan IE, De P, Choudhary D, Jang J, Tippmann F, Hins C, Ban N, Tans SJ, Shan S, Kramer G, Bukau B

PDB-28ln:
XBP1u-stalled RPL4 RNC in complex with NAC
Method: single particle / : Santos J, Guennigmann M, Gora RJ, Iljina M, Predin M, Kotan IE, De P, Choudhary D, Jang J, Tippmann F, Hins C, Ban N, Tans SJ, Shan S, Kramer G, Bukau B

EMDB-55800:
Integrin AlphaIIbBeta3 bound to Fab of the anti-HPA-1a antibody 26.4
Method: single particle / : de Pereda JM, Stam W, Gragera M, van der Meer F, Chichon FJ, Zarkadas E, van der Schoot E, Vidarsson G, Takagi J, Margadant C

PDB-9td2:
Integrin AlphaIIbBeta3 bound to Fab of the anti-HPA-1a antibody 26.4
Method: single particle / : de Pereda JM, Stam W, Gragera M, van der Meer F, Chichon FJ, Zarkadas E, van der Schoot E, Vidarsson G, Takagi J, Margadant C

EMDB-74855:
CryoEM structure of H5N1 A/Texas/37/2024 HA bound to Fab H20
Method: single particle / : Morano NC, Ho DD, Shapiro L, Kwong PD

EMDB-69143:
Cryo-EM structure of human ABCB7 in complex with CoPP:GSH/ADPVO4
Method: single particle / : Ju S, Choi SH, Lee HY, Jin MS

EMDB-69144:
Cryo-EM structures of the human ABCB7 in the apo state
Method: single particle / : Ju S, Choi SH, Lee HY, Jin MS

EMDB-69145:
Cryo-EM structure of the human ABCB7 in occluded state
Method: single particle / : Ju S, Choi SH, Lee HY, Jin MS

PDB-23pg:
Cryo-EM structure of human ABCB7 in complex with CoPP:GSH/ADPVO4
Method: single particle / : Ju S, Choi SH, Lee HY, Jin MS

PDB-23ph:
Cryo-EM structures of the human ABCB7 in the apo state
Method: single particle / : Ju S, Choi SH, Lee HY, Jin MS

PDB-23pi:
Cryo-EM structure of the human ABCB7 in occluded state
Method: single particle / : Ju S, Choi SH, Lee HY, Jin MS

EMDB-71685:
Cryo-EM structure of human NXPE1
Method: single particle / : Zhang H, Li F, Piper D, Min X

EMDB-72099:
Cryo-EM structure of PPAT-NUDT5 complex bound to adenosine-5'-monophosphate (AMP)
Method: single particle / : Witus SRW, Yang Z, Rape M

EMDB-72100:
Cryo-EM structure of PPAT-NUDT5 complex bound to 6-methylthioinosine-5'-monophosphate (6-meTIMP)
Method: single particle / : Witus SRW, Yang Z, Rape M

EMDB-72101:
Cryo-EM structure of PPAT-NUDT5 complex bound to 6-benzylthioinosine-5'-monophosphate (6-benzylTIMP)
Method: single particle / : Witus SRW, Yang Z, Rape M

EMDB-75818:
Cryo-EM structure of EV-D68 B3 VLP bound by neutralizing antibody 1E11
Method: single particle / : Cheng J, Lei H, Pletnev S, Morano NC, Zhang B, Du H, Rubin S, Moss DL, Krug PW, Kanekiyo M, Pierson TC, Ruckwardt TJ, Kwong PD, Zhou T

EMDB-75894:
Cryo-EM structure of EV-D68 B3 VLP bound by neutralizing antibody 5H03
Method: single particle / : Cheng J, Lei H, Pletnev S, Morano NC, Zhang B, Du H, Rubin S, Moss DL, Krug PW, Kanekiyo M, Pierson TC, Ruckwardt TJ, Shapiro L, Kwong PD, Zhou T

PDB-11lt:
Cryo-EM structure of EV-D68 B3 VLP bound by neutralizing antibody 1E11
Method: single particle / : Cheng J, Lei H, Pletnev S, Morano NC, Zhang B, Du H, Rubin S, Moss DL, Krug PW, Kanekiyo M, Pierson TC, Ruckwardt TJ, Kwong PD, Zhou T

PDB-11ov:
Cryo-EM structure of EV-D68 B3 VLP bound by neutralizing antibody 5H03
Method: single particle / : Cheng J, Lei H, Pletnev S, Morano NC, Zhang B, Du H, Rubin S, Moss DL, Krug PW, Kanekiyo M, Pierson TC, Ruckwardt TJ, Shapiro L, Kwong PD, Zhou T

EMDB-64742:
Cryo-EM structure of the histone deacetylase complex Rpd3L in complex with di-nucleosome
Method: single particle / : Zhao H, Li H, Wang C, Yang X, Zou B, Dong S, Zhang N, Zhou Y, Yi L, Zhang Y, Xie Y, Qin D, Chao W, Pei D, He J

PDB-9v2w:
Cryo-EM structure of the histone deacetylase complex Rpd3L in complex with di-nucleosome
Method: single particle / : Zhao H, Li H, Wang C, Yang X, Li H, Zou B, Dong S, Zhang N, Zhou Y, Yi L, Zhang Y, Xie Y, Qin D, Chao W, Pei D, He J

EMDB-72969:
AJ09-21 Fab in complex with HIV-1 Env 5MUT-3fill SOSIP
Method: single particle / : Gavor E, Gristick HB, Bjorkman PJ

EMDB-72970:
AJ09-83 Fab in complex with HIV-1 Env 5MUT-3fill SOSIP
Method: single particle / : Gavor E, Gristick HB, Bjorkman PJ

EMDB-72971:
AJ09-110 Fab in complex with HIV-1 Env 5MUT-3fill SOSIP
Method: single particle / : Gavor E, Gristick HB, Bjorkman PJ

Pages:

+
About EMN search

-
News

-
Feb 9, 2022. New format data for meta-information of EMDB entries

New format data for meta-information of EMDB entries

  • Version 3 of the EMDB header file is now the official format.
  • The previous official version 1.9 will be removed from the archive.

Related info.:EMDB header

External links:wwPDB to switch to version 3 of the EMDB data model

-
Oct 5, 2021. Nobel Prize for mechanically activated and temperature-gated ion channels

Nobel Prize for mechanically activated and temperature-gated ion channels

  • The Nobel Prize in Physiology or Medicine 2021 was awarded jointly to David Julius and Ardem Patapoutian "for their discoveries of receptors for temperature and touch."
  • EM Navigator can help to find cryo-EM structure data by both pioneers.

External links:The Nobel Prize in Physiology or Medicine 2021 - NobelPrize.org / Structure data by Ardem Patapoutian / Structure data by David Julius

+
Aug 12, 2020. Covid-19 info

Covid-19 info

URL: https://pdbj.org/emnavi/covid19.php

New page: Covid-19 featured information page in EM Navigator.

Related info.:Covid-19 info / Mar 5, 2020. Novel coronavirus structure data

+
Mar 5, 2020. Novel coronavirus structure data

Novel coronavirus structure data

Related info.:Yorodumi Speices / Aug 12, 2020. Covid-19 info

External links:COVID-19 featured content - PDBj / Molecule of the Month (242):Coronavirus Proteases

+
Jul 5, 2019. Downlodablable text data

Downlodablable text data

Some data of EM Navigator services can be downloaded as text file. Software such as Excel can load the data files.

PageDataFormat
EMN Searchsearch resultCSV, TSV, or JSON
EMN statisticsdata tableCSV or TSV

Related info.:EMN Search / EMN Statistics

-
EMN Search

3DEM data search

Advanced data search for EMDB and EM data in PDB widh various search and display options

Related info.:EMDB / PDB / EM Navigator / Q: What are the data sources of EM Navigator? / Yorodumi Search / Jul 5, 2019. Downlodablable text data

Read more