[English] 日本語
EMN search
- 3DEM data search -

-
Search query


Keywords
Database /
Q: What are the data sources of EM Navigator?
Data entries / weeks ago
Q: When the data are updated?
Author
Processing method
Display mode
Sort by
Num. of entries / page
Entry
Article
Sample
Experiment
Processing
Max number of data0 for all data
File format
  • CSV format (Comma-Separated Values, for Excel, etc.)
  • TSV format (Tab Separated Values, for Excel, etc.)
  • JSON format

Yorodumi Search

-
Search result

Showing 1 - 50 of 89 items for (author: chen & xy)

EMDB-38481:
Cryo-EM structure of the Apo CCR8-Gi complex
Method: single particle / : Peng Q, Jiang HH, Cheng XY, Li J, Zhang J

EMDB-37072:
Cryo-EM structure of dimeric ATP-TTR-3
Method: single particle / : Chen XY, Jia GW, Su ZM

EMDB-44516:
Structure of V.cholera DdmDE (2D:1E) in complex with DNA
Method: single particle / : Shen ZF, Yang XY, Fu TM

EMDB-44490:
Structure of V. cholerae DdmD in complex with ssDNA
Method: single particle / : Shen ZF, Yang XY, Fu TM

EMDB-44486:
Structure of apo-state V. cholerae DdmD
Method: single particle / : Shen ZF, Yang XY, Fu TM

EMDB-45254:
Structure of V. cholerae monomeric DdmD bound with ssDNA
Method: single particle / : Shen ZF, Yang XY, Fu TM

EMDB-36840:
3-Methylcrotonyl-CoA Carboxylase in MCCD state with Acetyl CoA
Method: single particle / : Liu DS, Su JY, Tian XY

EMDB-36705:
Human 3-methylcrotonyl-CoA carboxylase in BCCP-H2 state with MCoA
Method: single particle / : Liu DS, Su JY, Tian XY

EMDB-36706:
Human 3-methylcrotonyl-CoA carboxylase in BCCP-H1 state with MCoA
Method: single particle / : Liu DS, Su JY, Tian XY

EMDB-37249:
Cryo-EM structure of EBV gH/gL-gp42 in complex with fab 2C1
Method: single particle / : Fang XY, Zhao GX, Zeng MS, Liu Z

EMDB-35827:
Structure of CbCas9 bound to 20-nucleotide complementary DNA substrate
Method: single particle / : Zhang S, Lin S, Liu JJG

EMDB-37652:
Structure of CbCas9 bound to 6-nucleotide complementary DNA substrate
Method: single particle / : Zhang S, Lin S, Liu JJG

EMDB-37656:
Structure of CbCas9-PcrIIC1 complex bound to 28-bp DNA substrate (20-nt complementary)
Method: single particle / : Zhang S, Lin S, Liu JJG

EMDB-37657:
Structure of CbCas9-PcrIIC1 complex bound to 62-bp DNA substrate (symmetric 20-nt complementary)
Method: single particle / : Zhang S, Lin S, Liu JJG

EMDB-37762:
Structure of CbCas9-PcrIIC1 complex bound to 62-bp DNA substrate (non-targeting complex)
Method: single particle / : Zhang S, Lin S, Liu JJG

EMDB-36136:
Human MCC in MCCD state
Method: single particle / : Liu DS, Su JY, Tian XY

EMDB-35714:
Cryo-EM structure of Long-wave-sensitive opsin 1
Method: single particle / : Peng Q, Cheng XY, Li J, Lu QY, Li YY, Zhang J

EMDB-35239:
Prefusion spike of BA.1 with all-RBD-down conformation
Method: subtomogram averaging / : Gao YZ, Ma XY, Liu Z

EMDB-40779:
Structure of E. coli PtuA hexamer
Method: single particle / : Shen ZF, Yang XY, Fu TM

EMDB-28045:
Structure of PtuA
Method: single particle / : Shen ZF, Fu TM

EMDB-28048:
Structure of focused PtuA(dimer) and PtuB(monomer) complex
Method: single particle / : Shen ZF, Fu TM

EMDB-28049:
Structure of E.coli Septu (PtuAB) complex
Method: single particle / : Shen ZF, Fu TM

EMDB-35775:
The rice Na+/H+ antiporter SOS1 in an auto-inhibited state
Method: single particle / : Zhang XY, Tang LH, Zhang CR, Nie JW, Chen YH

EMDB-35950:
The truncated rice Na+/H+ antiporter SOS1 (1-976) in a constitutively active state
Method: single particle / : Zhang XY, Tang LH, Zhang CR, Nie JW, Chen YH

EMDB-34948:
Cryo-EM structure of the apo-GPR132-Gi
Method: single particle / : Wang JL, Ding JH, Sun JP, Yu X

EMDB-34950:
Activation mechanism of GPR132 by NPGLY
Method: single particle / : Wang JL, Ding JH, Sun JP, Yu X

EMDB-34951:
Activation mechanism of GPR132 by 9(S)-HODE
Method: single particle / : Wang JL, Ding JH, Sun JP, Yu X

EMDB-35044:
Activation mechanism of GPR132 by compound NOX-6-7
Method: single particle / : Wang JL, Ding JH, Sun JP, Yu X

EMDB-35601:
Cryo-EM structure of the alpha-MSH-bound human melanocortin receptor 5 (MC5R)-Gs complex
Method: single particle / : Feng WB, Zhou QT, Chen XY, Dai AT, Cai XQ, Liu X, Zhao FH, Chen Y, Ye CY, Xu YN, Cong ZT, Li H, Lin S, Yang DH, Wang MW

EMDB-35615:
Cryo-EM structure of the gamma-MSH-bound human melanocortin receptor 3 (MC3R)-Gs complex
Method: single particle / : Feng WB, Zhou QT, Chen XY, Dai AT, Cai XQ, Liu X, Zhao FH, Chen Y, Ye CY, Xu YN, Cong ZT, Li H, Lin S

EMDB-35616:
Cryo-EM structure of the PG-901-bound human melanocortin receptor 5 (MC5R)-Gs complex
Method: single particle / : Feng WB, Zhou QT, Chen XY, Dai AT, Cai XQ, Liu X, Zhao FH, Chen Y, Ye CY, Xu YN, Cong ZT, Li H, Lin S, Yang DH, Wang MW

EMDB-34338:
Postfusion spike of BA.1.1
Method: subtomogram averaging / : Gao YZ, Ma XY, Liu Z

EMDB-34339:
Prefusion spike protein of BA.1.1 with one-RBD-up conformation
Method: subtomogram averaging / : Gao YZ, Ma XY, Liu Z

EMDB-34340:
Prefusion spike of BA.2.3 with one-RBD-up conformation
Method: subtomogram averaging / : Gao YZ, Ma XY, Liu Z

EMDB-34341:
Postfusion spike of BA.2.3
Method: subtomogram averaging / : Gao YZ, Ma XY, Liu Z

EMDB-34343:
Prefusion spike of BA.2.3 with all-RBD-down conformation
Method: subtomogram averaging / : Gao YZ, Ma XY, Liu Z

EMDB-34259:
cryo-EM structure of Omicron BA.5 S protein in complex with XGv282
Method: single particle / : Xia XY, Zhang YY, Chi XM, Huang BD, Wu LS, Zhou Q

EMDB-34261:
cryo-EM structure of Omicron BA.5 S protein in complex with XGv289
Method: single particle / : Xia XY, Zhang YY, Chi XM, Huang BD, Wu LS, Zhou Q

EMDB-34263:
cryo-EM structure of Omicron BA.5 S protein in complex with S2L20
Method: single particle / : Xia XY, Zhang YY, Chi XM, Huang BD, Wu LS, Zhou Q

EMDB-32356:
Computational design of a potent Epstein-Barr virus fusion protein gB nanoparticle vaccine
Method: subtomogram averaging / : Sun C, Wang AJ, Fang XY, Gao YZ, Liu Z, Zeng MS

EMDB-32088:
Computational design of a potent Epstein-Barr virus fusion protein gB nanoparticle vaccine
Method: single particle / : Sun C, Fang XY, Wang AJ, Liu Z, Zeng MS

EMDB-33057:
Cryo-EM structure of the Boc5-bound hGLP-1R-Gs complex
Method: single particle / : Cong ZT, Zhou QT, Li Y, Chen LN, Zhang ZC, Liang AY, Liu Q, Wu XY, Dai AT, Xia T, Wu W, Zhang Y, Yang DH, Wang MW

EMDB-33058:
Cryo-EM structure of the WB4-24-bound hGLP-1R-Gs complex
Method: single particle / : Cong ZT, Zhou QT, Li Y, Chen LN, Zhang ZC, Liang AY, Liu Q, Wu XY, Dai AT, Xia T, Wu W, Zhang Y, Yang DH, Wang MW

EMDB-31879:
Cryo-EM structure of the GIPR/GLP-1R/GCGR triagonist peptide 20-bound human GLP-1R-Gs complex
Method: single particle / : Zhao FH, Zhou QT, Cong ZT, Hang KN, Zou XY, Zhang C, Chen Y, Dai AT, Liang AY, Ming QQ, Wang M, Chen LN, Xu PY, Chang RL, Feng WB, Xia T, Zhang Y, Wu BL, Yang DH, Zhao LH, Xu HE, Wang MW

EMDB-31603:
Cryo-EM structure of the tirzepatide (LY3298176)-bound human GLP-1R-Gs complex
Method: single particle / : Zhao FH, Zhou QT, Cong ZT, Hang KN, Zou XY, Zhang C, Chen Y, Dai AT, Liang AY, Ming QQ, Wang M, Chen LN, Xu PY, Chang RL, Feng WB, Xia T, Zhang Y, Wu BL, Yang DH, Zhao LH, Xu HE, Wang MW

EMDB-31606:
Cryo-EM structure of the tirzepatide-bound human GIPR-Gs complex
Method: single particle / : Zhao FH, Zhou QT, Cong ZT, Hang KN, Zou XY, Zhang C, Chen Y, Dai AT, Liang AY, Ming QQ, Wang M, Chen LN, Xu PY, Chang RL, Feng WB, Xia T, Zhang Y, Wu BL, Yang DH, Zhao LH, Xu HE, Wang MW

EMDB-31676:
Cryo-EM structure of the GIPR/GLP-1R/GCGR triagonist peptide 20-bound human GCGR-Gs complex
Method: single particle / : Zhao F, Zhou QT, Cong ZT, Hang KN, Zou XY, Zhang C, Chen Y, Dai AT, Liang AY, Ming QQ, Wang M, Chen LN, Xu PY, Chang RL, Feng WB, Xia T, Zhang Y, Wu BL, Yang DH, Zhao LH, Xu HE, Wang MW

EMDB-31836:
Cryo-EM structure of the non-acylated tirzepatide (LY3298176)-bound human GIPR-Gs complex
Method: single particle / : Zhao FH, Zhou QT, Cong ZT, Hang KN, Zou XY, Zhang C, Chen Y, Dai AT, Liang AY, Ming QQ, Wang M, Chen LN, Xu PY, Chang RL, Feng WB, Xia T, Zhang Y, Wu BL, Yang DH, Zhao LH, Xu HE, Wang MW

EMDB-31880:
Cryo-EM structure of the non-acylated tirzepatide (LY3298176)-bound human GLP-1R-Gs complex
Method: single particle / : Zhao FH, Zhou QT, Cong ZT, Hang KN, Zou XY, Zhang C, Chen Y, Dai AT, Liang AY, Ming QQ, Wang M, Chen LN, Xu PY, Chang RL, Feng WB, Xia T, Zhang Y, Wu BL, Yang DH, Zhao LH, Xu HE, Wang MW

EMDB-31604:
Cryo-EM structure of the GIPR/GLP-1R/GCGR triagonist peptide 20-bound human GIPR-Gs complex
Method: single particle / : Zhao F, Zhou QT, Cong ZT, Hang KN, Zou XY, Zhang C, Chen Y, Dai AT, Liang AY, Ming QQ, Wang M, Chen LN, Xu PY, Chang RL, Feng WB, Xia T, Zhang Y, Wu BL, Yang DH, Zhao LH, Xu HE, Wang MW

Pages:

+
About EMN search

-
News

-
Feb 9, 2022. New format data for meta-information of EMDB entries

New format data for meta-information of EMDB entries

  • Version 3 of the EMDB header file is now the official format.
  • The previous official version 1.9 will be removed from the archive.

Related info.:EMDB header

External links:wwPDB to switch to version 3 of the EMDB data model

-
Oct 5, 2021. Nobel Prize for mechanically activated and temperature-gated ion channels

Nobel Prize for mechanically activated and temperature-gated ion channels

  • The Nobel Prize in Physiology or Medicine 2021 was awarded jointly to David Julius and Ardem Patapoutian "for their discoveries of receptors for temperature and touch."
  • EM Navigator can help to find cryo-EM structure data by both pioneers.

External links:The Nobel Prize in Physiology or Medicine 2021 - NobelPrize.org / Structure data by Ardem Patapoutian / Structure data by David Julius

+
Aug 12, 2020. Covid-19 info

Covid-19 info

URL: https://pdbj.org/emnavi/covid19.php

New page: Covid-19 featured information page in EM Navigator.

Related info.:Covid-19 info / Mar 5, 2020. Novel coronavirus structure data

+
Mar 5, 2020. Novel coronavirus structure data

Novel coronavirus structure data

Related info.:Yorodumi Speices / Aug 12, 2020. Covid-19 info

External links:COVID-19 featured content - PDBj / Molecule of the Month (242)：Coronavirus Proteases

+
Jul 5, 2019. Downlodablable text data

Downlodablable text data

Some data of EM Navigator services can be downloaded as text file. Software such as Excel can load the data files.

PageDataFormat
EMN Searchsearch resultCSV, TSV, or JSON
EMN statisticsdata tableCSV or TSV

Related info.:EMN Search / EMN Statistics

-
EMN Search

3DEM data search

Advanced data search for EMDB and EM data in PDB widh various search and display options

Related info.:EMDB / PDB / EM Navigator / Q: What are the data sources of EM Navigator? / Yorodumi Search / Jul 5, 2019. Downlodablable text data

Read more