[English] 日本語
- 3DEM data search -

-
Search query


Keywords
Database /
Q: What are the data sources of EM Navigator?
Data entries / weeks ago
Q: When the data are updated?
Author
Processing method
Display mode
Sort by
Num. of entries / page
Entry
Article
Sample
Experiment
Processing
Max number of data0 for all data
File format
  • CSV format (Comma-Separated Values, for Excel, etc.)
  • TSV format (Tab Separated Values, for Excel, etc.)
  • JSON format

Yorodumi Search

-
Search result

Showing 1 - 50 of 2,028 items for (author: chen & ph)

EMDB-70338:
Cryo-EM structure of modified Zika virus E protein dimer complexed with a neutralizing antibody SMZAb2 Fab
Method: single particle / : Galkin A, Pozharski E

EMDB-71715:
Cryo-EM structure of modified JEV virus E protein dimer
Method: single particle / : Galkin A, Pozharski E, Li Y

EMDB-71727:
West Nile virus E protein
Method: single particle / : Galkin A, Pozharski E, Li Y

EMDB-71728:
Cryo-EM structure of modified Zika virus E protein dimer complexed with a neutralizing antibody OZ-D4 Fab
Method: single particle / : Galkin A, Pozharski E, Li Y

PDB-9od2:
Cryo-EM structure of modified Zika virus E protein dimer complexed with a neutralizing antibody SMZAb2 Fab
Method: single particle / : Galkin A, Pozharski E

PDB-9pl9:
Cryo-EM structure of modified JEV virus E protein dimer
Method: single particle / : Galkin A, Pozharski E, Li Y

PDB-9pm6:
Cryo-EM structure of modified Zika virus E protein dimer complexed with a neutralizing antibody OZ-D4 Fab
Method: single particle / : Galkin A, Pozharski E, Li Y

EMDB-54198:
In-situ structure of cytoplasmic ring of NPC of CEM T lymphoblast cell
Method: subtomogram averaging / : Hou Z, Zhang P

PDB-9qcd:
Micro-ED structure of the NSH2-CSH2 tandem domain of SHP2 in complex with the bis-phosphorylated pY627-pY659-Gab1 (613-694) peptide
Method: electron crystallography / : Machner L, Shaikhqasem A, Hamdi F, Breithaupt C, Parthier C, Kyrilis FL, Kastritis PL, Feller SM, Stubbs MT

EMDB-49912:
Cryo-EM structure of SARS-CoV-2 spike S2' trimer
Method: single particle / : Shi W, Jonaid G, Chen B

EMDB-49917:
Cryo-EM structure of SARS-CoV-2 spike S2' trimer (local map 1)
Method: single particle / : Shi W, Jonaid G, Chen B

EMDB-49918:
Cryo-EM structure of SARS-CoV-2 spike S2' trimer (local map 2)
Method: single particle / : Shi W, Jonaid G, Chen B

EMDB-49921:
Cryo-EM structure of SARS-CoV-2 spike S2' trimer (dimer of trimer)
Method: single particle / : Shi W, Jonaid G, Chen B

PDB-9nxy:
Cryo-EM structure of SARS-CoV-2 spike S2' trimer
Method: single particle / : Shi W, Jonaid G, Chen B

EMDB-52235:
Translational activators Aep1, Aep2 and Atp25 in complex with mRNA and the yeast mitochondrial ribosome (consensus)
Method: single particle / : Carlstrom A, Rovsnik U, Ott M

EMDB-52252:
Translational activators Aep1, Aep2 and Atp25 in complex with mRNA and the yeast mitochondrial ribosome (focused on the SSU body)
Method: single particle / : Carlstrom A, Rovsnik U, Ott M

EMDB-52256:
Translational activators Aep1, Aep2 and Atp25 in complex with mRNA and the yeast mitochondrial ribosome (focused on the SSU head)
Method: single particle / : Carlstrom A, Rovsnik U, Ott M

EMDB-52257:
Translational activators Aep1, Aep2 and Atp25 in complex with mRNA and the yeast mitochondrial ribosome (focused on the LSU)
Method: single particle / : Carlstrom A, Rovsnik U, Ott M

EMDB-52270:
Translational activators Aep1, Aep2 and Atp25 in complex with mRNA and the yeast mitochondrial ribosome (focused on Aep1-Aep2-Atp25)
Method: single particle / : Carlstrom A, Rovsnik U, Ott M

EMDB-52276:
Translational activator Aep3 in complex with mRNA and the yeast mitochondrial ribosome (focused on Aep3)
Method: single particle / : Carlstrom A, Rovsnik U, Ott M

EMDB-52277:
Translational activator Aep3 in complex with mRNA and the yeast mitochondrial ribosome (consensus map)
Method: single particle / : Carlstrom A, Rovsnik U, Ott M

EMDB-52278:
Translational activator Aep3 in complex with mRNA and the yeast mitochondrial ribosome (focused on the SSU)
Method: single particle / : Carlstrom A, Rovsnik U, Ott M

EMDB-52279:
Translational activator Aep3 in complex with mRNA and the yeast mitochondrial ribosome (focused on the SSU head)
Method: single particle / : Carlstrom A, Rovsnik U, Ott M

EMDB-52280:
Translational activator Aep3 in complex with mRNA and the yeast mitochondrial ribosome (focused on the LSU)
Method: single particle / : Carlstrom A, Rovsnik U, Ott M

EMDB-52281:
Translational activators Aep1, Aep2 and Atp25 in complex with mRNA and the yeast mitochondrial ribosome
Method: single particle / : Carlstrom A, Rovsnik U, Ott M

EMDB-52283:
Translational activator Aep3 in complex with mRNA and the yeast mitochondrial ribosome
Method: single particle / : Carlstrom A, Rovsnik U, Ott M

PDB-9hlz:
Translational activators Aep1, Aep2 and Atp25 in complex with mRNA and the yeast mitochondrial ribosome
Method: single particle / : Carlstrom A, Rovsnik U, Ott M

PDB-9hm0:
Translational activator Aep3 in complex with mRNA and the yeast mitochondrial ribosome
Method: single particle / : Carlstrom A, Rovsnik U, Ott M

EMDB-48387:
Translational activators Aep1, Aep2 and Atp25 in complex with mRNA and the yeast mitochondrial ribosome
Method: single particle / : Sherpa D, Shao S

EMDB-48388:
Translational activators Aep1, Aep2 and Atp25 in complex with mRNA and the yeast mitochondrial ribosome (Small ribosomal subunit)
Method: single particle / : Sherpa D, Shao S

EMDB-48390:
Translational activators Aep1, Aep2 and Atp25 in complex with mRNA and the yeast mitochondrial ribosome (large ribosomal subunit)
Method: single particle / : Sherpa D, Shao S

EMDB-48700:
Translational activators Aep1, Aep2 and Atp25 in complex with mRNA and the yeast mitochondrial ribosome (composite map SSU and Aep1-Aep2-Atp25 complex)
Method: single particle / : Sherpa D, Shao S

EMDB-70562:
Cryo-EM structure of human SV2A in the apo state
Method: single particle / : Pidathala S, Dai Y, Lee CH

EMDB-70563:
Cryo-EM structure of human SV2A in complex with levetiracetam
Method: single particle / : Pidathala S, Dai Y, Lee CH

EMDB-70564:
Cryo-EM structure of human SV2A in complex with UCBJ
Method: single particle / : Pidathala S, Dai Y, Lee CH

EMDB-70565:
Cryo-EM structure of human SV2A in complex with UCBJ and UCB1244283
Method: single particle / : Pidathala S, Dai Y, Lee CH

EMDB-70566:
Cryo-EM structure of human SV2A in complex with padsevonil
Method: single particle / : Pidathala S, Dai Y, Lee CH

EMDB-71812:
Cryo-EM structure of human SV2A in complex with Levetiracetam and UCB1244283
Method: single particle / : Pidathala S, Dai Y, Lee CH

PDB-9okf:
Cryo-EM structure of human SV2A in the apo state
Method: single particle / : Pidathala S, Dai Y, Lee CH

PDB-9okg:
Cryo-EM structure of human SV2A in complex with levetiracetam
Method: single particle / : Pidathala S, Dai Y, Lee CH

PDB-9okh:
Cryo-EM structure of human SV2A in complex with UCBJ
Method: single particle / : Pidathala S, Dai Y, Lee CH

PDB-9oki:
Cryo-EM structure of human SV2A in complex with UCBJ and UCB1244283
Method: single particle / : Pidathala S, Dai Y, Lee CH

PDB-9okj:
Cryo-EM structure of human SV2A in complex with padsevonil
Method: single particle / : Pidathala S, Dai Y, Lee CH

PDB-9prs:
Cryo-EM structure of human SV2A in complex with Levetiracetam and UCB1244283
Method: single particle / : Pidathala S, Dai Y, Lee CH

EMDB-52773:
LpDE from Escherichia coli
Method: single particle / : Siroy R, Fronzes R, Ieva R

EMDB-52777:
LpDE from Escherichia coli
Method: single particle / : Siroy R, Fronzes R, Ieva R

EMDB-52778:
LpDEM from Escherichia coli
Method: single particle / : Siroy R, Fronzes R, Ieva R

EMDB-52779:
LpDEM from Escherichia coli
Method: single particle / : Siroy R, Fronzes R, Ieva R

PDB-9i9z:
LpDE from Escherichia coli
Method: single particle / : Siroy R, Fronzes R, Ieva R

PDB-9ia0:
LpDE from Escherichia coli
Method: single particle / : Siroy R, Fronzes R, Ieva R

Pages:

+
About EMN search

-
News

-
Feb 9, 2022. New format data for meta-information of EMDB entries

New format data for meta-information of EMDB entries

  • Version 3 of the EMDB header file is now the official format.
  • The previous official version 1.9 will be removed from the archive.

Related info.:EMDB header

External links:wwPDB to switch to version 3 of the EMDB data model

-
Oct 5, 2021. Nobel Prize for mechanically activated and temperature-gated ion channels

Nobel Prize for mechanically activated and temperature-gated ion channels

  • The Nobel Prize in Physiology or Medicine 2021 was awarded jointly to David Julius and Ardem Patapoutian "for their discoveries of receptors for temperature and touch."
  • EM Navigator can help to find cryo-EM structure data by both pioneers.

External links:The Nobel Prize in Physiology or Medicine 2021 - NobelPrize.org / Structure data by Ardem Patapoutian / Structure data by David Julius

+
Aug 12, 2020. Covid-19 info

Covid-19 info

URL: https://pdbj.org/emnavi/covid19.php

New page: Covid-19 featured information page in EM Navigator.

Related info.:Covid-19 info / Mar 5, 2020. Novel coronavirus structure data

+
Mar 5, 2020. Novel coronavirus structure data

Novel coronavirus structure data

Related info.:Yorodumi Speices / Aug 12, 2020. Covid-19 info

External links:COVID-19 featured content - PDBj / Molecule of the Month (242):Coronavirus Proteases

+
Jul 5, 2019. Downlodablable text data

Downlodablable text data

Some data of EM Navigator services can be downloaded as text file. Software such as Excel can load the data files.

PageDataFormat
EMN Searchsearch resultCSV, TSV, or JSON
EMN statisticsdata tableCSV or TSV

Related info.:EMN Search / EMN Statistics

-
EMN Search

3DEM data search

Advanced data search for EMDB and EM data in PDB widh various search and display options

Related info.:EMDB / PDB / EM Navigator / Q: What are the data sources of EM Navigator? / Yorodumi Search / Jul 5, 2019. Downlodablable text data

Read more