[English] 日本語
- 3DEM data search -

-
Search query


Keywords
Database /
Q: What are the data sources of EM Navigator?
Data entries / weeks ago
Q: When the data are updated?
Author
Processing method
Display mode
Sort by
Num. of entries / page
Entry
Article
Sample
Experiment
Processing
Max number of data0 for all data
File format
  • CSV format (Comma-Separated Values, for Excel, etc.)
  • TSV format (Tab Separated Values, for Excel, etc.)
  • JSON format

Yorodumi Search

-
Search result

Showing 1 - 50 of 452 items for (author: chen & cz)

EMDB-63948:
Cryo-EM structure of conivaptan-bound human vasopressin V2 receptor complex with Fab
Method: single particle / : Jiang Y, You CZ, Zhang TW, Xu YW, Tan YX

EMDB-63949:
Cryo-EM structure of tolvaptan-bound human vasopressin V2 receptor complex with Fab
Method: single particle / : Jiang Y, You CZ, Zhang TW, Xu YW, Tan YX

EMDB-70867:
DDB1-CRBN with Ikaros(ZF2) and DEG-47: composite map and model submission
Method: single particle / : Rizvi Z, Lander GC

EMDB-70776:
DDB1-CRBN open NU refine map
Method: single particle / : Rizvi Z, Lander GC

EMDB-70777:
DDB1-CRBN open local refinement
Method: single particle / : Rizvi Z, Lander GC

EMDB-70778:
DDB1-CRBNopen with lenalidomide
Method: single particle / : Rizvi Z, Lander GC

EMDB-70781:
DDB1-CRBN intermediate NU
Method: single particle / : Rizvi Z, Lander GC

EMDB-70782:
DDB1-CRBN[Closed] with lenalidomide and SB-405483- consensus refinement
Method: single particle / : Rizvi Z, Lander GC

EMDB-70783:
DDB1-CRBN[Closed] with lenalidomide and SB-405483- Focused refine map
Method: single particle / : Rizvi Z, Lander GC

EMDB-70784:
Composite map of DDB1-CRBN[Closed] in the presence of Lenalidomide and SB-405483
Method: single particle / : Rizvi Z, Lander GC

EMDB-70788:
DDB1-CRBN-CK1a with lenalidomide and SB-405483
Method: single particle / : Rizvi Z, Lander GC

EMDB-70789:
DDB1-CRBN-CK1a with lenalidomide and SB-405483 (Focused map)
Method: single particle / : Rizvi Z, Lander GC

EMDB-70790:
DDB1-CRBN with casein kinase 1 alpha, lenalidomide, and SB-405483: composite map submission
Method: single particle / : Rizvi Z, Lander GC

EMDB-70795:
DDB1-CRBN with Ikaros ZF2-3, lenalidomide, and SB-405483: Consensus map
Method: single particle / : Rizvi Z, Lander GC

EMDB-70796:
DDB1-CRBN with Ikaros(ZF2-3), lenalidomide, and SB-405483: focused map submission
Method: single particle / : Rizvi Z, Lander GC

EMDB-70799:
DDB1-CRBN with Ikaros ZF2-3, lenalidomide, and SB-405483; composite map submission
Method: single particle / : Rizvi Z, Lander GC

EMDB-70801:
DDB1-CRBN with CK1a and DEG47
Method: single particle / : Rizvi Z, Lander GC

EMDB-70802:
DDB1-CRBN with CK1a and DEG-47: focused map on CRBN
Method: single particle / : Rizvi Z, Lander GC

EMDB-70803:
DDB1-CRBN with CK1A and DEG-47: Focused map on CK1a
Method: single particle / : Rizvi Z, Lander GC

EMDB-70804:
DDB1-CRBN with CK1a and DEG47: Composite map submission
Method: single particle / : Rizvi Z, Lander GC

EMDB-70827:
DDB1-CRBN with CK1a, SB-405483, and DEG-47- consensus map submission
Method: single particle / : Rizvi Z, Lander GC

EMDB-70835:
DDB1-CRBN with CK1a, SB-405483, and DEG-47: focused map on CRBN
Method: single particle / : Rizvi Z, Lander GC

EMDB-70836:
DDB1-CRBN with CK1 alpha, SB-405483, and DEG-47: Focused map on CK1 alpha
Method: single particle / : Rizvi Z, Lander GC

EMDB-70862:
DDB1-CRBN with CK1 alpha, SB-405483, and DEG-47: composite map and model submission
Method: single particle / : Rizvi Z, Lander GC

EMDB-70865:
DDB1-CRBN with ikaros(ZF2) and DEG47- consensus map submission
Method: single particle / : Rizvi Z, Lander GC

EMDB-70866:
DDB1-CRBN with Ikaros(ZF2) and DEG-47: focused map submission
Method: single particle / : Rizvi Z, Lander GC

EMDB-70868:
DDB1-CRBN with ikaros, SB-405483, and DEG-47: consensus map submission
Method: single particle / : Rizvi Z, Lander GC

EMDB-70869:
DDB1-CRBN with ikaros(ZF2) with SB-405483, and DEG-47: Focused map submission
Method: single particle / : Rizvi Z, Lander GC

EMDB-70870:
DDB1-CRBN with Ikaros(ZF2), SB-405483, and DEG-47: composite map and model submission
Method: single particle / : Rizvi Z, Lander GC

EMDB-53046:
Mouse otoferlin (216-1931) in complex with an MSP2N2 lipid nanodisc (30 mol% DOPS, 10 mol% PI(4,5)P2)
Method: single particle / : Cretu C, Moser T

EMDB-54802:
Mouse otoferlin (216-1931) in the lipid-free, Ca2+-bound state, "open" conformation (class 2)
Method: single particle / : Cretu C, Moser T

EMDB-54805:
Mouse otoferlin (216-1931) in complex with a lipid nanodisc (comprising 25% PS and 5% PIP2)
Method: single particle / : Cretu C, Moser T

EMDB-54809:
Mouse otoferlin (216-1931) in the lipid-free Ca2+-bound state, "open" conformation (class 1)
Method: single particle / : Cretu C, Moser T

EMDB-54827:
Mouse otoferlin (residues 216-1931) in the lipid-bound state (merged datasets)
Method: single particle / : Cretu C, Moser T

EMDB-54883:
Mouse otoferlin (216-1931) in the lipid-free, Ca2+-free state ("loose" conformation)
Method: single particle / : Cretu C, Moser T

EMDB-54923:
Mouse otoferlin (216-1931) in the lipid-free Ca2+-bound state, "closed-like" conformation
Method: single particle / : Cretu C, Moser T

EMDB-49659:
Cryo-EM structure of a bacterial prototype ATP-binding cassette transporter MalFGK2.
Method: single particle / : Qian R, Jing W, Vinay I, Shanwen Z, Jeehae S, William GL, Luis MRH, Jong HS, Young AG, IIya L, Kirill M, Baron C, Huan B

EMDB-49901:
Cryo-EM structure of a bacterial prototype ATP-binding cassette transporter MalFGK2.
Method: single particle / : Qian R, Jing W, Vinay I, Shanwen Z, Jeehae S, William GL, Luis MRH, Jong HS, Young AG, IIya L, Kirill M, Baron C, Huan B

PDB-9nqj:
Cryo-EM structure of a bacterial prototype ATP-binding cassette transporter MalFGK2.
Method: single particle / : Qian R, Jing W, Vinay I, Shanwen Z, Jeehae S, William GL, Luis MRH, Jong HS, Young AG, IIya L, Kirill M, Baron C, Huan B

PDB-9nxc:
Cryo-EM structure of a bacterial prototype ATP-binding cassette transporter MalFGK2.
Method: single particle / : Qian R, Jing W, Vinay I, Shanwen Z, Jeehae S, William GL, Luis MRH, Jong HS, Young AG, IIya L, Kirill M, Baron C, Huan B

EMDB-44008:
Cryo-EM reveals molecular mechanisms underlying the inhibitory effect of netrin-4 on laminin matrix formation
Method: single particle / : Kulczyk AW

PDB-9az3:
Cryo-EM reveals molecular mechanisms underlying the inhibitory effect of netrin-4 on laminin matrix formation
Method: single particle / : Kulczyk AW

EMDB-70838:
Rabbit 37496 base and V1/V3 epitope polyclonal Fabs in complex with BG505 MD39.3 SOSIP
Method: single particle / : Ozorowski G, Torres JL, Jackson AM, Ward AB

EMDB-70839:
Rabbit 37496 base and gp41-GH epitope polyclonal Fabs in complex with BG505 MD39.3 SOSIP
Method: single particle / : Ozorowski G, Torres JL, Jackson AM, Ward AB

EMDB-70840:
Rabbit 37496 base and gp120-GH epitope polyclonal Fabs in complex with BG505 MD39.3 SOSIP
Method: single particle / : Ozorowski G, Torres JL, Jackson AM, Ward AB

EMDB-70846:
Rabbit 37496 base and C3V5 epitope polyclonal Fabs in complex with BG505 MD39.3 SOSIP
Method: single particle / : Ozorowski G, Torres JL, Jackson AM, Ward AB

EMDB-70847:
Rabbit 37450 base, gp41-FP and gp120int epitope polyclonal Fabs in complex with BG505 MD39.3 SOSIP
Method: single particle / : Ozorowski G, Torres JL, Jackson AM, Ward AB

EMDB-70848:
Rabbit 37442 base and gp120int epitope polyclonal Fabs in complex with BG505 MD39.3 SOSIP
Method: single particle / : Ozorowski G, Torres JL, Jackson AM, Ward AB

EMDB-70852:
NHP RJh18 base epitope polyclonal Fabs in complex with BG505 MD39.3 SOSIP
Method: single particle / : Ozorowski G, Torres JL, Jackson AM, Ward AB

EMDB-70855:
NHP RUv18 base epitope polyclonal Fabs in complex with BG505 MD39.3 SOSIP
Method: single particle / : Ozorowski G, Torres JL, Jackson AM, Ward AB

Pages:

+
About EMN search

-
News

-
Feb 9, 2022. New format data for meta-information of EMDB entries

New format data for meta-information of EMDB entries

  • Version 3 of the EMDB header file is now the official format.
  • The previous official version 1.9 will be removed from the archive.

Related info.:EMDB header

External links:wwPDB to switch to version 3 of the EMDB data model

-
Oct 5, 2021. Nobel Prize for mechanically activated and temperature-gated ion channels

Nobel Prize for mechanically activated and temperature-gated ion channels

  • The Nobel Prize in Physiology or Medicine 2021 was awarded jointly to David Julius and Ardem Patapoutian "for their discoveries of receptors for temperature and touch."
  • EM Navigator can help to find cryo-EM structure data by both pioneers.

External links:The Nobel Prize in Physiology or Medicine 2021 - NobelPrize.org / Structure data by Ardem Patapoutian / Structure data by David Julius

+
Aug 12, 2020. Covid-19 info

Covid-19 info

URL: https://pdbj.org/emnavi/covid19.php

New page: Covid-19 featured information page in EM Navigator.

Related info.:Covid-19 info / Mar 5, 2020. Novel coronavirus structure data

+
Mar 5, 2020. Novel coronavirus structure data

Novel coronavirus structure data

Related info.:Yorodumi Speices / Aug 12, 2020. Covid-19 info

External links:COVID-19 featured content - PDBj / Molecule of the Month (242)：Coronavirus Proteases

+
Jul 5, 2019. Downlodablable text data

Downlodablable text data

Some data of EM Navigator services can be downloaded as text file. Software such as Excel can load the data files.

PageDataFormat
EMN Searchsearch resultCSV, TSV, or JSON
EMN statisticsdata tableCSV or TSV

Related info.:EMN Search / EMN Statistics

-
EMN Search

3DEM data search

Advanced data search for EMDB and EM data in PDB widh various search and display options

Related info.:EMDB / PDB / EM Navigator / Q: What are the data sources of EM Navigator? / Yorodumi Search / Jul 5, 2019. Downlodablable text data

Read more