[English] 日本語
- 3DEM data search -

-
Search query


Keywords
Database /
Q: What are the data sources of EM Navigator?
Data entries / weeks ago
Q: When the data are updated?
Author
Processing method
Display mode
Sort by
Num. of entries / page
Entry
Article
Sample
Experiment
Processing
Max number of data0 for all data
File format
  • CSV format (Comma-Separated Values, for Excel, etc.)
  • TSV format (Tab Separated Values, for Excel, etc.)
  • JSON format

Yorodumi Search

-
Search result

Showing 1 - 50 of 19,553 items for (author: chen & c)

EMDB-74149:
Mitochondrial Hsp60 from Acanthamoeba castellanii
Method: single particle / : Fry MY, Luce BE, Stefely JA, Samuelson J, Mootha VK, Chao LH

EMDB-74150:
CryoEM structure of respiratory complex III intermediate from Acanthamoeba castellanii
Method: single particle / : Fry MY, Luce BE, Stefely JA, Samuelson J, Mootha VK, Chao LH

EMDB-74151:
Mitochondrial ATP synthase dimer from Acanthamoeba castellanii
Method: single particle / : Fry MY, Luce BE, Stefely JA, Samuelson J, Mootha VK, Chao LH

EMDB-74152:
A composite map of the mitochondrial ATP synthase monomer from Acanthamoeba castellanii
Method: single particle / : Fry MY, Luce BE, Stefely JA, Samuelson J, Mootha VK, Chao LC

EMDB-74153:
Mitochondrial ATP synthase monomer from Acanthamoeba castellanii
Method: single particle / : Fry MY, Luce BE, Stefely JA, Samuelson J, Mootha VK, Chao LH

EMDB-74154:
F1 ATPase from Acanthamoeba castellanii
Method: single particle / : Fry MY, Luce BE, Stefely JA, Samuelson J, Mootha VK, Chao LH

EMDB-74155:
Mitochondrial MDH and OSCP in the peripheral stalk of ATP synthase in Acanthamoeba castellanii
Method: single particle / : Fry MY, Luce BE, Stefely JA, Samuelson J, Mootha VK, Chao LH

EMDB-74156:
Membrane region of Acanthamoeba castellanii mitochondrial ATP synthase dimer
Method: single particle / : Fry MY, Luce BE, Stefely JA, Mootha VK, Chao LH

PDB-9zfr:
Mitochondrial Hsp60 from Acanthamoeba castellanii
Method: single particle / : Fry MY, Luce BE, Stefely JA, Samuelson J, Mootha VK, Chao LH

PDB-9zfs:
CryoEM structure of respiratory complex III intermediate from Acanthamoeba castellanii
Method: single particle / : Fry MY, Luce BE, Stefely JA, Samuelson J, Mootha VK, Chao LH

PDB-9zft:
Mitochondrial ATP synthase monomer from Acanthamoeba castellanii
Method: single particle / : Fry MY, Luce BE, Stefely JA, Samuelson J, Mootha VK, Chao LH

PDB-9zfu:
F1 ATPase from Acanthamoeba castellanii
Method: single particle / : Fry MY, Luce BE, Stefely JA, Samuelson J, Mootha VK, Chao LH

PDB-9zfv:
Mitochondrial MDH and OSCP in the peripheral stalk of ATP synthase in Acanthamoeba castellanii
Method: single particle / : Fry MY, Luce BE, Stefely JA, Samuelson J, Mootha VK, Chao LH

PDB-9zfw:
Membrane region of Acanthamoeba castellanii mitochondrial ATP synthase dimer
Method: single particle / : Fry MY, Luce BE, Stefely JA, Mootha VK, Chao LH

EMDB-71536:
Composite map of closed form of PIC-Med-SWI/SNF
Method: single particle / : Yang C, Nagai S, Chen DH

PDB-9pdk:
Composite map of closed form of PIC-Med-SWI/SNF
Method: single particle / : Yang C, Nagai S, Chen DH

EMDB-67084:
RIPK1 death domain filamentation drives TNF-induced apoptosis
Method: single particle / : Liu P, Tan YB, Luo D

EMDB-66903:
SARS-CoV-2 Omicron JD.1.1 spike trimer (S-6P) in complex with 3 R102-9 Fabs and 3 C092 Fabs (3 RBD up)
Method: single particle / : Liu B, Niu C, Li Z, Yuan H, Xiong X

EMDB-66904:
SARS-CoV-2 Omicron JD.1.1 spike trimer (S-6P) in complex with 3 R102-9 Fabs and 3 C092 Fabs, focused refinement of RBD and Fab region
Method: single particle / : Liu B, Niu C, Li Z, Yuan H, Xiong X

EMDB-71492:
TBP/TFIIE/DNA of PIC-Med-SWI/SNF-Nucleosome
Method: single particle / : Yang C, Nagai S, Chen DH

PDB-9pbw:
TBP/TFIIE/DNA of PIC-Med-SWI/SNF-Nucleosome
Method: single particle / : Yang C, Nagai S, Chen DH

EMDB-71494:
PolII/TFIIF of PIC-Med-SWI/SNF-Nucleosome
Method: single particle / : Yang C, Nagai S, Chen DH

PDB-9pbz:
PolII/TFIIF of PIC-Med-SWI/SNF-Nucleosome
Method: single particle / : Yang C, Nagai S, Chen DH

EMDB-71535:
Composite map of open form of PIC-Med-SWI/SNF
Method: single particle / : Yang C, Nagai S, Chen DH

PDB-9pdj:
Composite map of open form of PIC-Med-SWI/SNF
Method: single particle / : Yang C, Nagai S, Chen DH

EMDB-71541:
Composite map of PIC-Med-SWI/SNF-Nucleosome
Method: single particle / : Yang C, Nagai S, Chen DH

PDB-9pdr:
Composite map of PIC-Med-SWI/SNF-Nucleosome
Method: single particle / : Yang C, Nagai S, Chen DH

EMDB-71518:
Consensus map of Closed form of PIC-Med-SWI/SNF
Method: single particle / : Yang C, Nagai S, Chen DH

EMDB-71519:
Consensus map of Open form of PIC-Med-SWI/SNF
Method: single particle / : Yang C, Nagai S, Chen DH

EMDB-71517:
Tail of Mediator of PIC-Med-SWI/SNF
Method: single particle / : Yang C, Nagai S, Chen DH

PDB-9pcr:
Tail of Mediator of PIC-Med-SWI/SNF
Method: single particle / : Yang C, Nagai S, Chen DH

EMDB-71493:
TFIIH of PIC-Med-SWI/SNF-Nucleosome
Method: single particle / : Yang C, Nagai S, Chen DH

PDB-9pby:
TFIIH of PIC-Med-SWI/SNF-Nucleosome
Method: single particle / : Yang C, Nagai S, Chen DH

EMDB-66509:
Cryo-EM structure of the flagellar filament in Vibrio parahaemolyticus VP288
Method: helical / : Ng CH

EMDB-66511:
Cryo-EM structure of the flagellar filament in Vibrio Cholerae
Method: helical / : Ng CH

EMDB-83901:
Cryo-EM structure of bacteriophage A1002 overall capsid
Method: single particle / : Chen Y, Liu HR

EMDB-71520:
Consensus map of PIC-Med-SWI/SNF-Nucleosome
Method: single particle / : Yang C, Nagai S, Chen DH

EMDB-56367:
Cryo-electron tomogram acquired on a cryo-FIB lamella of two adjacent NIH 3T3 cells.
Method: electron tomography / : Gerard SF, Cheng DCW, Toro-Nahuelpan M, Mahamid J, Diz-Munoz A

EMDB-66393:
3-fold region of mature T7 without defocus refinement
Method: single particle / : Liu HR, Chen WY

EMDB-71479:
Extra Med5/16 of PIC-Med-SWI/SNF
Method: single particle / : Yang C, Nagai S, Chen DH

PDB-9pbi:
Extra Med5/16 of PIC-Med-SWI/SNF
Method: single particle / : Yang C, Nagai S, Chen DH

EMDB-71490:
ARP of SWI/SNF of PIC-Med-SWI/SNF-Nucleosome
Method: single particle / : Yang C, Nagai S, Chen DH

PDB-9pbt:
ARP of SWI/SNF of PIC-Med-SWI/SNF-Nucleosome
Method: single particle / : Yang C, Nagai S, Chen DH

EMDB-66399:
3f-fold region of mature T7 with defocus refinement
Method: single particle / : Liu HR, Chen WY

PDB-9wze:
3f-fold region of mature T7 with defocus refinement
Method: single particle / : Liu HR, Chen WY

EMDB-76908:
Cryo-EM structure of Arabidopsis VIM1 in complex with hemi-methylated CG-containing nucleosome and UBC11
Method: single particle / : Chen X, Song J

EMDB-76625:
Cryo-EM structure of Arabidopsis VIM1 in complex with hemi-methylated CG-containing nucleosome 1
Method: single particle / : Chen X, Song J

EMDB-76627:
Cryo-EM structure of Arabidopsis VIM1 in complex with hemi-methylated CG-containing nucleosome 1
Method: single particle / : Chen X, Song J

EMDB-76629:
Cryo-EM structure of Arabidopsis VIM1 in complex with hemi-methylated CG-containing nucleosome 2
Method: single particle / : Chen X, Song J

EMDB-76630:
Cryo-EM structure of Arabidopsis VIM1 in complex with hemi-methylated CG-containing nucleosome 2
Method: single particle / : Chen X, Song J

Pages:

+
About EMN search

-
News

-
Feb 9, 2022. New format data for meta-information of EMDB entries

New format data for meta-information of EMDB entries

  • Version 3 of the EMDB header file is now the official format.
  • The previous official version 1.9 will be removed from the archive.

Related info.:EMDB header

External links:wwPDB to switch to version 3 of the EMDB data model

-
Oct 5, 2021. Nobel Prize for mechanically activated and temperature-gated ion channels

Nobel Prize for mechanically activated and temperature-gated ion channels

  • The Nobel Prize in Physiology or Medicine 2021 was awarded jointly to David Julius and Ardem Patapoutian "for their discoveries of receptors for temperature and touch."
  • EM Navigator can help to find cryo-EM structure data by both pioneers.

External links:The Nobel Prize in Physiology or Medicine 2021 - NobelPrize.org / Structure data by Ardem Patapoutian / Structure data by David Julius

+
Aug 12, 2020. Covid-19 info

Covid-19 info

URL: https://pdbj.org/emnavi/covid19.php

New page: Covid-19 featured information page in EM Navigator.

Related info.:Covid-19 info / Mar 5, 2020. Novel coronavirus structure data

+
Mar 5, 2020. Novel coronavirus structure data

Novel coronavirus structure data

Related info.:Yorodumi Speices / Aug 12, 2020. Covid-19 info

External links:COVID-19 featured content - PDBj / Molecule of the Month (242)：Coronavirus Proteases

+
Jul 5, 2019. Downlodablable text data

Downlodablable text data

Some data of EM Navigator services can be downloaded as text file. Software such as Excel can load the data files.

PageDataFormat
EMN Searchsearch resultCSV, TSV, or JSON
EMN statisticsdata tableCSV or TSV

Related info.:EMN Search / EMN Statistics

-
EMN Search

3DEM data search

Advanced data search for EMDB and EM data in PDB widh various search and display options

Related info.:EMDB / PDB / EM Navigator / Q: What are the data sources of EM Navigator? / Yorodumi Search / Jul 5, 2019. Downlodablable text data

Read more