EMDB-71535: Composite map of open form of PIC-Med-SWI/SNF

Basic information

Entry

Database: EMDB / ID: EMD-71535

• Title: Composite map of open form of PIC-Med-SWI/SNF
• Map data: composite map that is composed of focus-refinement maps without sharpening

Sample

• Complex: Open form of PIC-Med-SWI/SNF
  • Protein or peptide: x 62 types
  • DNA: x 2 types
• Ligand: x 3 types

• Keywords: SWI/SNF / PIC / TRANSCRIPTION / TRANSCRIPTION-DNA complex

Function / homology

Function:

TFIIE-class transcription factor complex binding / regulation of establishment of protein localization to chromosome / carbon catabolite activation of transcription / meiotic gene conversion / NuA3b histone acetyltransferase complex / positive regulation of cell adhesion involved in single-species biofilm formation / NuA3a histone acetyltransferase complex / NuA3 histone acetyltransferase complex / positive regulation of mating type switching / positive regulation of invasive growth in response to glucose limitation / HDACs deacetylate histones / regulation of mitotic recombination / TFIIA-class transcription factor complex binding / aggrephagy / transcription open complex formation at RNA polymerase II promoter / RNA polymerase III transcription regulatory region sequence-specific DNA binding / TFIIH-class transcription factor complex binding / RNA polymerase III preinitiation complex assembly / phosphatidylinositol-5-phosphate binding / RNA polymerase II promoter clearance / regulation of mRNA 3'-end processing / RNA polymerase I general transcription initiation factor binding / positive regulation of mitotic recombination / core mediator complex / transcription factor TFIIE complex / nucleotide-excision repair factor 3 complex / nucleotide-excision repair, preincision complex assembly / DNA translocase activity / negative regulation of ribosomal protein gene transcription by RNA polymerase II / TFIIF-class transcription factor complex binding / transcription factor TFIIK complex / DNA strand invasion / rDNA binding / transcriptional start site selection at RNA polymerase II promoter / transcription factor TFIIF complex / RPB4-RPB7 complex / phosphatidylinositol-3-phosphate binding / SUMOylation of chromatin organization proteins / mediator complex / transcription factor TFIIIB complex / transcription factor TFIIA complex / histone H3K14ac reader activity / RNA polymerase I preinitiation complex assembly / transcription factor TFIIH core complex / transcription factor TFIIH holo complex / Ino80 complex / cyclin-dependent protein serine/threonine kinase activator activity / RSC-type complex / transcription elongation factor activity / DNA 5'-3' helicase / nucleosome disassembly / DNA binding, bending / ATP-dependent chromatin remodeler activity / transcription preinitiation complex / poly(A)+ mRNA export from nucleus / SWI/SNF complex / nuclear-transcribed mRNA catabolic process, deadenylation-dependent decay / RNA Polymerase I Transcription Initiation / transcription factor TFIID complex / double-strand break repair via break-induced replication / 5'-3' DNA helicase activity / Processing of Capped Intron-Containing Pre-mRNA / RNA Polymerase III Transcription Initiation From Type 1 Promoter / RNA Polymerase III Transcription Initiation From Type 2 Promoter / RNA polymerase II general transcription initiation factor activity / RNA Pol II CTD phosphorylation and interaction with CE / Formation of the Early Elongation Complex / Formation of TC-NER Pre-Incision Complex / mRNA Capping / Estrogen-dependent gene expression / RNA polymerase II transcribes snRNA genes / RNA Polymerase I Promoter Escape / TP53 Regulates Transcription of DNA Repair Genes / RNA Polymerase II Promoter Escape / RNA Polymerase II Transcription Pre-Initiation And Promoter Opening / RNA Polymerase II Transcription Initiation / RNA Polymerase II Transcription Initiation And Promoter Clearance / RNA Polymerase II Pre-transcription Events / ATPase activator activity / RNA-templated transcription / positive regulation of transcription by RNA polymerase I / TFIIB-class transcription factor binding / positive regulation of nuclear-transcribed mRNA poly(A) tail shortening / nuclear chromosome / Gap-filling DNA repair synthesis and ligation in TC-NER / RNA polymerase II complex binding / termination of RNA polymerase II transcription / TFIID-class transcription factor complex binding / histone H4 reader activity / DNA 3'-5' helicase / protein phosphatase activator activity / termination of RNA polymerase I transcription / Dual incision in TC-NER / positive regulation of transcription initiation by RNA polymerase II / positive regulation of RNA polymerase II transcription preinitiation complex assembly / maintenance of transcriptional fidelity during transcription elongation by RNA polymerase II / positive regulation of translational initiation / transcription initiation at RNA polymerase I promoter / transcription by RNA polymerase III / nuclear-transcribed mRNA catabolic process

Domain/homology:

Mediator of RNA polymerase II transcription subunit 3 / Mediator complex, subunit Med2, fungi / Mediator complex subunit 2 / Mediator complex subunit 3 fungal / : / Mediator complex, subunit Med15, fungi / Mediator complex, subunit Med5, fungi / Gal11, coactivator domain / Mediator complex subunit 15 / Mediator complex subunit Med5 / Gal11 activator-binding domain (ABD1) / Mediator complex subunit 15, KIX domain / KIX domain / Mediator complex, subunit Med19, fungi / Rox3 mediator complex subunit / SAS complex subunit SAS5/transcription initiation factor TFIID subunit 14 / Mediator of RNA polymerase II transcription subunit 22, Saccharomycetes / Mediator of RNA polymerase II transcription subunit 20 / Transcription regulator protein Rtt102 / Rtt102p-like transcription regulator protein / : / Chromatin-remodelling complex, RSC SWI/SNF subunit Rsc7/Swp82 / Chromatin remodelling complex Rsc7/Swp82 subunit / Mediator complex, subunit Med6, fungi / : / Mediator complex subunit 16, C-terminal / Mediator complex, subunit Med16 / : / Mediator complex subunit 16, N-terminal / Mediator complex, subunit Med10 / Transcription factor subunit Med10 of Mediator complex / Mediator of RNA polymerase II transcription subunit 9 / RNA polymerase II transcription mediator complex subunit 9 / Mediator complex, subunit Med4 / Vitamin-D-receptor interacting Mediator subunit 4 / : / Tfa2 E-tether / Mediator complex, subunit Med31 / Mediator complex, subunit Med21 / Mediator of RNA polymerase II, subunit Med31 superfamily / : / SOH1 / Subunit 21 of Mediator complex / SWIFT domain / Mediator complex, subunit Med7 / Mediator complex, subunit Med7/Med21-like / Mediator complex, subunit Med7 superfmaily / : / MED7 protein / YEATS / Mediator complex, subunit Med20 / SMARCC, C-terminal / : / TATA-binding related factor (TRF) of subunit 20 of Mediator complex / SWIRM-associated region 1 / Mediator complex, subunit Med6 / Mediator complex, subunit Med14 / Mediator complex, subunit Med17 / Mediator complex, subunit Med6 superfamily / MED6 mediator sub complex component / Mediator complex subunit MED14 / Subunit 17 of Mediator complex / Mediator of RNA polymerase II transcription subunit 22 / Mediator complex, subunit Med8, fungi/metazoa / Mediator complex, subunit Med11 / Surfeit locus protein 5 subunit 22 of Mediator complex / Mediator of RNA polymerase II transcription complex subunit 8 / Mediator complex protein / Mediator complex, subunit Med18 / Med18 protein / SNF5/SMARCB1/INI1 / Bacterial type XPD DNA helicase, FeS cluster domain / SNF5 / SMARCB1 / INI1 / Transcription elongation factor, TFIIS / Transcription elongation factor, IIS-type / Transcription factor S-II (TFIIS), central domain / Domain in the central regions of transcription elongation factor S-II (and elsewhere) / Transcription elongation factor S-II, central domain superfamily / Transcription elongation factor S-II, central domain / TFIIS central domain profile. / Transcription elongation factor, TFIIS/CRSP70, N-terminal, sub-type / Domain in the N-terminus of transcription elongation factor S-II (and elsewhere) / : / YEATS superfamily / YEATS family / YEATS domain profile. / QLQ / Mediator complex, subunit Med1 / Mediator of RNA polymerase II transcription subunit 1 / Glutamine-Leucine-Glutamine, QLQ / QLQ domain profile. / QLQ / TFIIS N-terminal domain profile. / Snf2-ATP coupling, chromatin remodelling complex / Snf2, ATP coupling domain / Snf2-ATP coupling, chromatin remodelling complex / TFIIS helical bundle-like domain / Transcription factor IIS, N-terminal / Transcription factor TFIIE beta subunit, DNA-binding domain / Transcription initiation factor TFIIE, beta subunit

Component:

DNA-directed RNA polymerase II subunit RPB1 / General transcription and DNA repair factor IIH helicase subunit XPD/RAD3 / Transcription elongation factor S-II / DNA-directed RNA polymerase II subunit RPB2 / SWI/SNF chromatin-remodeling complex subunit SWI1 / TATA-box-binding protein / DNA-directed RNA polymerase II subunit RPB3 / SWI/SNF chromatin-remodeling complex subunit SNF5 / Transcription regulatory protein SNF6 / Mediator of RNA polymerase II transcription subunit 14 / Mediator of RNA polymerase II transcription subunit 15 / DNA-directed RNA polymerase II subunit RPB4 / DNA-directed RNA polymerases I, II, and III subunit RPABC1 / DNA-directed RNA polymerases I, II, and III subunit RPABC2 / DNA-directed RNA polymerases I, II, and III subunit RPABC3 / SWI/SNF chromatin-remodeling complex subunit SNF2 / DNA-directed RNA polymerases I, II, and III subunit RPABC5 / Mediator of RNA polymerase II transcription subunit 19 / DNA-directed RNA polymerase II subunit RPB9 / Transcription initiation factor IIB / Mediator of RNA polymerase II transcription subunit 16 / Mediator of RNA polymerase II transcription subunit 17 / Mediator of RNA polymerase II transcription subunit 22 / Mediator of RNA polymerase II transcription subunit 18 / SWI/SNF complex subunit SWI3 / Transcription initiation factor IIA large subunit / Transcription initiation factor IIA subunit 2 / General transcription and DNA repair factor IIH subunit TFB1 / Mediator of RNA polymerase II transcription subunit 9 / DNA-directed RNA polymerase II subunit RPB7 / Mediator of RNA polymerase II transcription subunit 20 / Transcription initiation factor TFIID subunit 14 / Transcription initiation factor IIE subunit alpha / Transcription initiation factor IIE subunit beta / Mediator of RNA polymerase II transcription subunit 8 / Mediator of RNA polymerase II transcription subunit 31 / Mediator of RNA polymerase II transcription subunit 6 / DNA-directed RNA polymerase II subunit RPB11 / Mediator of RNA polymerase II transcription subunit 3 / DNA-directed RNA polymerases I, II, and III subunit RPABC4 / Transcription initiation factor IIF subunit alpha / Transcription initiation factor IIF subunit beta / SWI/SNF global transcription activator complex subunit SWP82 / Mediator of RNA polymerase II transcription subunit 21 / Mediator of RNA polymerase II transcription subunit 5 / Regulator of Ty1 transposition protein 102 / Transcription regulatory protein SNF12 / General transcription and DNA repair factor IIH helicase/translocase subunit XPB/SSL2 / General transcription and DNA repair factor IIH subunit TFB2 / RNA polymerase II transcription factor B subunit 3 / General transcription and DNA repair factor IIH subunit SSL1 / Actin-like protein ARP9 / Mediator of RNA polymerase II transcription subunit 10 / Mediator of RNA polymerase II transcription subunit 7 / General transcription and DNA repair factor IIH subunit TFB4 / Mediator of RNA polymerase II transcription subunit 2 / Mediator of RNA polymerase II transcription subunit 1 / Mediator of RNA polymerase II transcription subunit 4 / Actin-related protein 7 / General transcription and DNA repair factor IIH subunit TFB5 / Mediator of RNA polymerase II transcription subunit 11

• Biological species: Saccharomyces cerevisiae (brewer's yeast)
• Method: single particle reconstruction / cryo EM / Resolution: 2.8 Å
• Authors: Yang C / Nagai S / Chen D-H

Funding support

United States, 1 items

Organization	Grant number	Country
Other private		United States

• Citation: Journal: To Be Published; Title: Composite map of open form of PIC-Med-SWI/SNF; Authors: Yang C / Nagai S / Chen D-H

History

Deposition	Jun 30, 2025	-
Header (metadata) release	Oct 14, 2026	-
Map release	Oct 14, 2026	-
Update	Oct 14, 2026	-
Current status	Oct 14, 2026	Processing site: RCSB / Status: Released

Map

• File: Download / File: emd_71535.map.gz / Format: CCP4 / Size: 1000 MB / Type: IMAGE STORED AS FLOATING POINT NUMBER (4 BYTES)
• Annotation: composite map that is composed of focus-refinement maps without sharpening
• Voxel size: X=Y=Z: 1.4 Å

Density

Contour Level	By AUTHOR: 0.336
Minimum - Maximum	0.0 - 1.7128214
Average (Standard dev.)	0.008311172 (±0.054586846)

• Symmetry: Space group: 1

Details

EMDB XML:

Map geometry	Axis order X Y Z Origin 0 0 0 Dimensions 640 640 640 Spacing 640 640 640
Cell	A=B=C: 896.0 Å α=β=γ: 90.0 °

Supplemental data

Additional map: composite map that is composed of focus-refinement maps...

• File: emd_71535_additional_1.map
• Annotation: composite map that is composed of focus-refinement maps with sharpening

Sample components

Entire : Open form of PIC-Med-SWI/SNF

• Entire: Name: Open form of PIC-Med-SWI/SNF

Components

• Complex: Open form of PIC-Med-SWI/SNF
  • Protein or peptide: General transcription and DNA repair factor IIH helicase subunit XPD/RAD3
  • Protein or peptide: General transcription and DNA repair factor IIH subunit TFB1
  • Protein or peptide: General transcription and DNA repair factor IIH subunit TFB2
  • Protein or peptide: RNA polymerase II transcription factor B subunit 3
  • Protein or peptide: General transcription and DNA repair factor IIH subunit TFB4
  • Protein or peptide: General transcription and DNA repair factor IIH subunit TFB5
  • Protein or peptide: General transcription and DNA repair factor IIH subunit SSL1
  • Protein or peptide: General transcription and DNA repair factor IIH helicase subunit XPB
  • Protein or peptide: SWI/SNF chromatin-remodeling complex subunit SNF5
  • Protein or peptide: Transcription initiation factor TFIID subunit 14
  • Protein or peptide: DNA-directed RNA polymerase II subunit RPB1
  • Protein or peptide: DNA-directed RNA polymerase II subunit RPB2
  • Protein or peptide: DNA-directed RNA polymerase II subunit RPB3
  • Protein or peptide: DNA-directed RNA polymerase II subunit RPB4
  • Protein or peptide: DNA-directed RNA polymerases I, II, and III subunit RPABC1
  • Protein or peptide: DNA-directed RNA polymerases I, II, and III subunit RPABC2
  • Protein or peptide: DNA-directed RNA polymerase II subunit RPB7
  • Protein or peptide: DNA-directed RNA polymerases I, II, and III subunit RPABC3
  • Protein or peptide: DNA-directed RNA polymerase II subunit RPB9
  • Protein or peptide: DNA-directed RNA polymerases I, II, and III subunit RPABC5
  • Protein or peptide: DNA-directed RNA polymerase II subunit RPB11
  • Protein or peptide: DNA-directed RNA polymerases I, II, and III subunit RPABC4
  • Protein or peptide: Transcription initiation factor IIB
  • DNA: promoter DNA
  • Protein or peptide: TATA-box-binding protein
  • Protein or peptide: Transcription initiation factor IIF subunit alpha
  • Protein or peptide: Transcription initiation factor IIF subunit beta
  • Protein or peptide: Transcription elongation factor S-II
  • DNA: promoter DNA
  • Protein or peptide: Transcription initiation factor IIA large subunit
  • Protein or peptide: Transcription initiation factor IIA subunit 2
  • Protein or peptide: Transcription initiation factor IIE subunit alpha
  • Protein or peptide: Transcription initiation factor IIE subunit beta
  • Protein or peptide: Mediator of RNA polymerase II transcription subunit 6
  • Protein or peptide: Mediator of RNA polymerase II transcription subunit 8
  • Protein or peptide: Mediator of RNA polymerase II transcription subunit 11
  • Protein or peptide: Mediator of RNA polymerase II transcription subunit 17
  • Protein or peptide: Mediator of RNA polymerase II transcription subunit 18
  • Protein or peptide: Mediator of RNA polymerase II transcription subunit 20
  • Protein or peptide: Mediator of RNA polymerase II transcription subunit 22
  • Protein or peptide: Mediator of RNA polymerase II transcription subunit 4
  • Protein or peptide: Mediator of RNA polymerase II transcription subunit 7
  • Protein or peptide: Mediator of RNA polymerase II transcription subunit 9
  • Protein or peptide: Mediator of RNA polymerase II transcription subunit 10
  • Protein or peptide: Mediator of RNA polymerase II transcription subunit 14
  • Protein or peptide: Mediator of RNA polymerase II transcription subunit 19
  • Protein or peptide: Mediator of RNA polymerase II transcription subunit 21
  • Protein or peptide: Mediator of RNA polymerase II transcription subunit 31
  • Protein or peptide: Mediator of RNA polymerase II transcription subunit 1
  • Protein or peptide: Transcription regulatory protein SNF12
  • Protein or peptide: SWI/SNF complex subunit SWI3
  • Protein or peptide: Transcription regulatory protein SNF6
  • Protein or peptide: SWI/SNF global transcription activator complex subunit SWP82
  • Protein or peptide: unsigned peptide of SWISNF
  • Protein or peptide: Transcription regulatory protein SNF2
  • Protein or peptide: SWI/SNF chromatin-remodeling complex subunit SWI1
  • Protein or peptide: Regulator of Ty1 transposition protein 102
  • Protein or peptide: Actin-related protein 7
  • Protein or peptide: Actin-like protein ARP9
  • Protein or peptide: Mediator of RNA polymerase II transcription subunit 5
  • Protein or peptide: Mediator of RNA polymerase II transcription subunit 16
  • Protein or peptide: Mediator of RNA polymerase II transcription subunit 2
  • Protein or peptide: Mediator of RNA polymerase II transcription subunit 3
  • Protein or peptide: Mediator of RNA polymerase II transcription subunit 15
• Ligand: IRON/SULFUR CLUSTER
• Ligand: ZINC ION
• Ligand: MAGNESIUM ION

Supramolecule #1: Open form of PIC-Med-SWI/SNF

• Supramolecule: Name: Open form of PIC-Med-SWI/SNF / type: complex / ID: 1 / Parent: 0 / Macromolecule list: #1-#64
• Source (natural): Organism: Saccharomyces cerevisiae (brewer's yeast)

Macromolecule #1: General transcription and DNA repair factor IIH helicase subunit ...

• Macromolecule: Name: General transcription and DNA repair factor IIH helicase subunit XPD/RAD3; type: protein_or_peptide / ID: 1 / Number of copies: 2 / Enantiomer: LEVO / EC number: DNA 5'-3' helicase
• Source (natural): Organism: Saccharomyces cerevisiae (brewer's yeast)
• Molecular weight: Theoretical: 89.899047 KDa

Sequence

String:

MKFYIDDLPV LFPYPKIYPE QYNYMCDIKK TLDVGGNSIL EMPSGTGKTV SLLSLTIAYQ MHYPEHRKII YCSRTMSEIE KALVELENL MDYRTKELGY QEDFRGLGLT SRKNLCLHPE VSKERKGTVV DEKCRRMTNG QAKRKLEEDP EANVELCEYH E NLYNIEVE DYLPKGVFSF EKLLKYCEEK TLCPYFIVRR MISLCNIIIY SYHYLLDPKI AERVSNEVSK DSIVIFDEAH NI DNVCIES LSLDLTTDAL RRATRGANAL DERISEVRKV DSQKLQDEYE KLVQGLHSAD ILTDQEEPFV ETPVLPQDLL TEA IPGNIR RAEHFVSFLK RLIEYLKTRM KVLHVISETP KSFLQHLKQL TFIERKPLRF CSERLSLLVR TLEVTEVEDF TALK DIATF ATLISTYEEG FLLIIEPYEI ENAAVPNPIM RFTCLDASIA IKPVFERFSS VIITSGTISP LDMYPRMLNF KTVLQ KSYA MTLAKKSFLP MIITKGSDQV AISSRFEIRN DPSIVRNYGS MLVEFAKITP DGMVVFFPSY LYMESIVSMW QTMGIL DEV WKHKLILVET PDAQETSLAL ETYRKACSNG RGAILLSVAR GKVSEGIDFD HQYGRTVLMI GIPFQYTESR ILKARLE FM RENYRIREND FLSFDAMRHA AQCLGRVLRG KDDYGVMVLA DRRFSRKRSQ LPKWIAQGLS DADLNLSTDM AISNTKQF L RTMAQPTDPK DQEGVSVWSY EDLIKHQNSR KDQGGFIENE NKEGEQDEDE DEDIEMQ

UniProtKB: General transcription and DNA repair factor IIH helicase subunit XPD/RAD3

Macromolecule #2: General transcription and DNA repair factor IIH subunit TFB1

• Macromolecule: Name: General transcription and DNA repair factor IIH subunit TFB1; type: protein_or_peptide / ID: 2 / Number of copies: 2 / Enantiomer: LEVO
• Source (natural): Organism: Saccharomyces cerevisiae (brewer's yeast)
• Molecular weight: Theoretical: 72.993328 KDa

Sequence

String:

MSHSGAAIFE KVSGIIAINE DVSPAELTWR STDGDKVHTV VLSTIDKLQA TPASSEKMML RLIGKVDESK KRKDNEGNEV VPKPQRHMF SFNNRTVMDN IKMTLQQIIS RYKDADIYEE KRRREESAQH TETPMSSSSV TAGTPTPHLD TPQLNNGAPL I NTAKLDDS LSKEKLLTNL KLQQSLLKGN KVLMKVFQET VINAGLPPSE FWSTRIPLLR AFALSTSQKV GPYNVLSTIK PV ASSENKV NVNLSREKIL NIFENYPIVK KAYTDNVPKN FKEPEFWARF FSSKLFRKLR GEKIMQNDRG DVIIDRYLTL DQE FDRKDD DMLLHPVKKI IDLDGNIQDD PVVRGNRPDF TMQPGVDING NSDGTVDILK GMNRLSEKMI MALKNEYSRT NLQN KSNIT NDEEDEDNDE RNELKIDDLN ESYKTNYAII HLKRNAHEKT TDNDAKSSAD SIKNADLKVS NQQMLQQLSL VMDNL INKL DLNQVVPNNE VSNKINKRVI TAIKINAKQA KHNNVNSALG SFVDNTSQAN ELEVKSTLPI DLLESCRMLH TTCCEF LKH FYIHFQSGEQ KQASTVKKLY NHLKDCIEKL NELFQDVLNG DGESMSNTCT AYLKPVLNSI TLATHKYDEY FNEYNNN SN

UniProtKB: General transcription and DNA repair factor IIH subunit TFB1

Macromolecule #3: General transcription and DNA repair factor IIH subunit TFB2

• Macromolecule: Name: General transcription and DNA repair factor IIH subunit TFB2; type: protein_or_peptide / ID: 3 / Number of copies: 2 / Enantiomer: LEVO
• Source (natural): Organism: Saccharomyces cerevisiae (brewer's yeast)
• Molecular weight: Theoretical: 58.602312 KDa

Sequence

String:

MSDYSLKHSV TQYLEEIPQQ VQNRLYTSPA TCLAIYRILP PLAKFFIMAM VFNENEVPLL DLDKWVNSNG KLQFQNAIKS MKSLHLLIP NKSSGTLMIN LNPTFKISLR NALTGGEVQN SFGVVVEENV VSLDLLDEYS ANKWETILHF MVGTPLAKIP S EKVLNLLK HSKLMEEVNS TGEFKITNEG FQFLLQEINS QLWTLLLQYL KMIETSKMDL VDVLHFIFML GALEVGKAYK ID ALSETQR IMLQDMRDYG LVFQKHSNDS IFYPTKLALM LTSDTKTIRS ASNAMDSVLR QNREEPSVNE DGANGKSTTD ITT SDDLNK AGLKNQDIPD GSLIVETNFK IYSYSNSPLQ IAVLSLFVHL KARFVNMVLG QITRESIRRA LTNGITADQI IAYL ETHAH PQMRRLAEEK LEKKLELDPN CKEPLQVLPP TVVDQIRLWQ LELDRVITYE GSLYSDFETS QEYNLLSKYA QDIGV LLWK DDKKKKFFIS KEGNSQVLDF AKRKLKKKQ

UniProtKB: General transcription and DNA repair factor IIH subunit TFB2

Macromolecule #4: RNA polymerase II transcription factor B subunit 3

• Macromolecule: Name: RNA polymerase II transcription factor B subunit 3 / type: protein_or_peptide / ID: 4 / Number of copies: 2 / Enantiomer: LEVO
• Source (natural): Organism: Saccharomyces cerevisiae (brewer's yeast)
• Molecular weight: Theoretical: 38.188438 KDa

Sequence

String:

MLMDEYEENK DMCPICKTDR YLSPDVKFLV NPECYHRICE SCVDRIFSLG PAQCPYKGCD KILRKNKFKT QIFDDVEVEK EVDIRKRVF NVFNKTIDDF NGDLVEYNKY LEEVEDIIYK LDHGIDVAKT EEKLRTYEEL NKQLIMNNLE RSRTEIESFE Q RQKFEKEM KLKKRLLERQ IEEEERMNKE WTKKEIVNRL STTTQDINET IEGVKNTVKL KKSSARRKLE ELNRVLKNNP YF NSNVNVQ NSRLKDAVPF TPFNGDREAH PRFTLKGSVY NDPFIKDLEH RKEFIASGFN TNYAYERVLT EAFMGLGCVI SEE L

UniProtKB: RNA polymerase II transcription factor B subunit 3

Macromolecule #5: General transcription and DNA repair factor IIH subunit TFB4

• Macromolecule: Name: General transcription and DNA repair factor IIH subunit TFB4; type: protein_or_peptide / ID: 5 / Number of copies: 2 / Enantiomer: LEVO
• Source (natural): Organism: Saccharomyces cerevisiae (brewer's yeast)
• Molecular weight: Theoretical: 37.506422 KDa

Sequence

String:

MDAISDPTFK HARSRKQVTE ESPSLLTVII EIAPKLWTTF DEEGNEKGSI IKVLEALIVF LNAHLAFNSA NKVAVIAAYS QGIKYLYPE STSALKASES ENKTRSDLKI INSDMYRRFR NVDETLVEEI YKLFELEKKQ IEQNSQRSTL AGAMSAGLTY V NRISKESV TTSLKSRLLV LTCGSGSSKD EIFQYIPIMN CIFSATKMKC PIDVVKIGGS KESTFLQQTT DATNGVYLHV ES TEGLIQY LATAMFIDPS LRPIIVKPNH GSVDFRTSCY LTGRVVAVGF ICSVCLCVLS IIPPGNKCPA CDSQFDEHVI AKL KRKPVV PRLKAKKKVT KP

UniProtKB: General transcription and DNA repair factor IIH subunit TFB4

Macromolecule #6: General transcription and DNA repair factor IIH subunit TFB5

• Macromolecule: Name: General transcription and DNA repair factor IIH subunit TFB5; type: protein_or_peptide / ID: 6 / Number of copies: 2 / Enantiomer: LEVO
• Source (natural): Organism: Saccharomyces cerevisiae (brewer's yeast)
• Molecular weight: Theoretical: 8.24349 KDa

Sequence

String:

MARARKGALV QCDPSIKALI LQIDAKMSDI VLEELDDTHL LVNPSKVEFV KHELNRLLSK NIYNPMDEEE NQ

UniProtKB: General transcription and DNA repair factor IIH subunit TFB5

Macromolecule #7: General transcription and DNA repair factor IIH subunit SSL1

• Macromolecule: Name: General transcription and DNA repair factor IIH subunit SSL1; type: protein_or_peptide / ID: 7 / Number of copies: 2 / Enantiomer: LEVO
• Source (natural): Organism: Saccharomyces cerevisiae (brewer's yeast)
• Molecular weight: Theoretical: 52.370035 KDa

Sequence

String:

MAPVVISESE EDEDRVAITR RTKRQVHFDG EGDDRVDQQQ QQHSSSHRDR DKHVQRKKKK RLSNRNLQGS NGGYAWEDEI KRSWDLVKV DDEGDMASLV ASIVEARKKR TAKKNITPYQ RGIIRSLILT LDCSEAMLEK DLRPNRHAMI IQYAIDFVHE F FDQNPISQ MGIIIMRNGL AQLVSQVSGN PQDHIDALKS IRKQEPKGNP SLQNALEMAR GLLLPVPAHC TREVLIVFGS LS TTDPGDI HQTIDSLVSE KIRVKVLGLS AQVAICKELC KATNYGDESF YKILLDETHL KELFNEAVTP LPVNKINKGF TLV KMGFPT RIFEDTPTFC SCHSKLVYGG YFCPNCHSKV CSLPTVCPCC DLMLILSTHL ARSYHHLMPL KTFAEVPTTE KFRS EDCFS CQSRFPILKN HKNGKLLTSS RYRCEDCKQE FCVDCDVFIH EILHNCPGCE SKPVIT

UniProtKB: General transcription and DNA repair factor IIH subunit SSL1

Macromolecule #8: General transcription and DNA repair factor IIH helicase subunit XPB

• Macromolecule: Name: General transcription and DNA repair factor IIH helicase subunit XPB; type: protein_or_peptide / ID: 8 / Number of copies: 2 / Enantiomer: LEVO / EC number: DNA helicase
• Source (natural): Organism: Saccharomyces cerevisiae (brewer's yeast)
• Molecular weight: Theoretical: 95.461664 KDa

Sequence

String:

MTDVEGYQPK SKGKIFPDMG ESFFSSDEDS PATDAEIDEN YDDNRETSEG RGERDTGAMV TGLKKPRKKT KSSRHTAADS SMNQMDAKD KALLQDTNSD IPADFVPDSV SGMFRSHDFS YLRLRPDHAS RPLWISPSDG RIILESFSPL AEQAQDFLVT I AEPISRPS HIHEYKITAY SLYAAVSVGL ETDDIISVLD RLSKVPVAES IINFIKGATI SYGKVKLVIK HNRYFVETTQ AD ILQMLLN DSVIGPLRID SDHQVQPPED VLQQQLQQTA GKPATNVNPN DVEAVFSAVI GGDNEREEED DDIDAVHSFE IAN ESVEVV KKRCQEIDYP VLEEYDFRND HRNPDLDIDL KPSTQIRPYQ EKSLSKMFGN GRARSGIIVL PCGAGKTLVG ITAA CTIKK SVIVLCTSSV SVMQWRQQFL QWCTLQPENC AVFTSDNKEM FQTESGLVVS TYSMVANTRN RSHDSQKVMD FLTGR EWGF IILDEVHVVP AAMFRRVVST IAAHAKLGLT ATLVREDDKI GDLNFLIGPK LYEANWMELS QKGHIANVQC AEVWCP MTA EFYQEYLRET ARKRMLLYIM NPTKFQACQF LIQYHERRGD KIIVFSDNVY ALQEYALKMG KPFIYGSTPQ QERMNIL QN FQYNDQINTI FLSKVGDTSI DLPEATCLIQ ISSHYGSRRQ EAQRLGRILR AKRRNDEGFN AFFYSLVSKD TQEMYYST K RQAFLVDQGY AFKVITHLHG MENIPNLAYA SPRERRELLQ EVLLKNEEAA GIEVGDDADN SVGRGSNGHK RFKSKAVRG EGSLSGLAGG EDMAYMEYST NKNKELKEHH PLIRKMYYKN LKK

UniProtKB: General transcription and DNA repair factor IIH helicase/translocase subunit XPB/SSL2

Macromolecule #9: SWI/SNF chromatin-remodeling complex subunit SNF5

• Macromolecule: Name: SWI/SNF chromatin-remodeling complex subunit SNF5 / type: protein_or_peptide / ID: 9 / Number of copies: 4 / Enantiomer: LEVO
• Source (natural): Organism: Saccharomyces cerevisiae (brewer's yeast)
• Molecular weight: Theoretical: 102.642172 KDa

Sequence

String:

MNNQPQGTNS VPNSIGNIFS NIGTPSFNMA QIPQQLYQSL TPQQLQMIQQ RHQQLLRSRL QQQQQQQQQT SPPPQTHQSP PPPPQQSQP IANQSATSTP PPPPAPHNLH PQIGQVPLAP APINLPPQIA QLPLATQQQV LNKLRQQAIA KNNPQVVNAI T VAQQQVQR QIEQQKGQQT AQTQLEQQRQ LLVQQQQQQQ LRNQIQRQQQ QQFRHHVQIQ QQQQKQQQQQ QQHQQQQQQQ QQ QQQQQQQ QQQQQQQQQQ QQQQQQQQQQ QGQIPQSQQV PQVRSMSGQP PTNVQPTIGQ LPQLPKLNLP KYQTIQYDPP ETK LPYPTY WSDKKADTDT LLYEQIIQRD KINKYSLIRE TNGYDPFSIY GFSNKEYISR LWHTLKYYQD LKNTRMKSIT STSQ KIPSA SIWGNGYSGY GNGITNTTTR VIPQVEVGNR KHYLEDKLKV YKQAMNETSE QLVPIRLEFD QDRDRFFLRD TLLWN KNDK LIKIEDFVDD MLRDYRFEDA TREQHIDTIC QSIQEQIQEF QGNPYIELNQ DRLGGDDLRI RIKLDIVVGQ NQLIDQ FEW DISNSDNCPE EFAESMCQEL ELPGEFVTAI AHSIREQVHM YHKSLALLGY NFDGSAIEDD DIRSRMLPTI TLDDVYR PA AESKIFTPNL LQISAAELER LDKDKDRDTR RKRRQGRSNR RGMLALSGTS ASNTSMNGVH NTVAAGNASS LPPGEILL P DIADIPRTFR TPVPSTLMPG GVDVGPSVES YELRNTTTYK SRPDRPKPVS PPCYIIDHIP GHSLLLSIKL PGKVNTKEE FAAAPNDTSS GTNAMLPSPE SLKTKLNSNI RAGVTIPSIP NPIANHTVTN SPNPTLQPVI PGGAASKSVP TPSLPIAPPV APHDSEATL LTNSNNGSSN NNTQNT

UniProtKB: SWI/SNF chromatin-remodeling complex subunit SNF5

Macromolecule #10: Transcription initiation factor TFIID subunit 14

• Macromolecule: Name: Transcription initiation factor TFIID subunit 14 / type: protein_or_peptide / ID: 10 / Number of copies: 2 / Enantiomer: LEVO
• Source (natural): Organism: Saccharomyces cerevisiae (brewer's yeast)
• Molecular weight: Theoretical: 27.473154 KDa

Sequence

String:

MVATVKRTIR IKTQQHILPE VPPVENFPVR QWSIEIVLLD DEGKEIPATI FDKVIYHLHP TFANPNRTFT DPPFRIEEQG WGGFPLDIS VFLLEKAGER KIPHDLNFLQ ESYEVEHVIQ IPLNKPLLTE ELAKSGSTEE TTANTGTIGK RRTTTNTTAE P KAKRAKTG SASTVKGSVD LEKLAFGLTK LNEDDLVGVV QMVTDNKTPE MNVTNNVEEG EFIIDLYSLP EGLLKSLWDY VK KNTE

UniProtKB: Transcription initiation factor TFIID subunit 14

Macromolecule #11: DNA-directed RNA polymerase II subunit RPB1

• Macromolecule: Name: DNA-directed RNA polymerase II subunit RPB1 / type: protein_or_peptide / ID: 11 / Number of copies: 4 / Enantiomer: LEVO / EC number: DNA-directed RNA polymerase
• Source (natural): Organism: Saccharomyces cerevisiae (brewer's yeast)
• Molecular weight: Theoretical: 191.821578 KDa

Sequence

String:

MVGQQYSSAP LRTVKEVQFG LFSPEEVRAI SVAKIRFPET MDETQTRAKI GGLNDPRLGS IDRNLKCQTC QEGMNECPGH FGHIDLAKP VFHVGFIAKI KKVCECVCMH CGKLLLDEHN ELMRQALAIK DSKKRFAAIW TLCKTKMVCE TDVPSEDDPT Q LVSRGGCG NTQPTIRKDG LKLVGSWKKD RATGDADEPE LRVLSTEEIL NIFKHISVKD FTSLGFNEVF SRPEWMILTC LP VPPPPVR PSISFNESQR GEDDLTFKLA DILKANISLE TLEHNGAPHH AIEEAESLLQ FHVATYMDND IAGQPQALQK SGR PVKSIR ARLKGKEGRI RGNLMGKRVD FSARTVISGD PNLELDQVGV PKSIAKTLTY PEVVTPYNID RLTQLVRNGP NEHP GAKYV IRDSGDRIDL RYSKRAGDIQ LQYGWKVERH IMDNDPVLFN RQPSLHKMSM MAHRVKVIPY STFRLNLSVT SPYNA DFDG DEMNLHVPQS EETRAELSQL CAVPLQIVSP QSNKPCMGIV QDTLCGIRKL TLRDTFIELD QVLNMLYWVP DWDGVI PTP AIIKPKPLWS GKQILSVAIP NGIHLQRFDE GTTLLSPKDN GMLIIDGQII FGVVEKKTVG SSNGGLIHVV TREKGPQ VC AKLFGNIQKV VNFWLLHNGF STGIGDTIAD GPTMREITET IAEAKKKVLD VTKEAQANLL TAKHGMTLRE SFEDNVVR F LNEARDKAGR LAEVNLKDLN NVKQMVMAGS KGSFINIAQM SACVGQQSVE GKRIAFGFVD RTLPHFSKDD YSPESKGFV ENSYLRGLTP QEFFFHAMGG REGLIDTAVK TAETGYIQRR LVKALEDIMV HYDNTTRNSL GNVIQFIYGE DGMDAAHIEK QSLDTIGGS DAAFEKRYRV DLLNTDHTLD PSLLESGSEI LGDLKLQVLL DEEYKQLVKD RKFLREVFVD GEANWPLPVN I RRIIQNAQ QTFHIDHTKP SDLTIKDIVL GVKDLQENLL VLRGKNEIIQ NAQRDAVTLF CCLLRSRLAT RRVLQEYRLT KQ AFDWVLS NIEAQFLRSV VHPGEMVGVL AAQSIGEPAT QMTLNTFHFA GVASKKVTSG VPRLKEILNV AKNMKTPSLT VYL EPGHAA DQEQAKLIRS AIEHTTLKSV TIASEIYYDP DPRSTVIPED EEIIQLHFSL LDEEAEQSFD QQSPWLLRLE LDRA AMNDK DLTMGQVGER IKQTFKNDLF VIWSEDNDEK LIIRCRVVRP KSLDAETEAE EDHMLKKIEN TMLENITLRG VENIE RVVM MKYDRKVPSP TGEYVKEPEW VLETDGVNLS EVMTVPGIDP TRIYTNSFID IMEVLGIEAG RAALYKEVYN VIASDG SYV NYRHMALLVD VMTTQGGLTS VTRHGFNRSN TGALMRCSFE ETVEILFEAG ASAELDDCRG VSENVILGQM APIGTGA FD VMIDEESLVK YMPEQKITEI EDGQDGGVTP YSNESGLVNA DLDVKDELMF SPLVDSGSND AMAGGFTAYG GADYGEAT S PFGAYGEAPT SPGFGVSSPG FSPTSPTYSP TSPAYSPTSP SYSPTSPSYS PTSPSYSPTS PSYSPTSPSY SPTSPSYSP TSPSYSPTSP SYSPTSPSYS PTSPSYSPTS PSYSPTSPSY SPTSPSYSPT SPSYSPTSPA YSPTSPSYSP TSPSYSPTSP SYSPTSPSY SPTSPNYSPT SPSYSPTSPG YSPGSPAYSP KQDEQKHNEN ENSR

UniProtKB: DNA-directed RNA polymerase II subunit RPB1

Macromolecule #12: DNA-directed RNA polymerase II subunit RPB2

• Macromolecule: Name: DNA-directed RNA polymerase II subunit RPB2 / type: protein_or_peptide / ID: 12 / Number of copies: 2 / Enantiomer: LEVO / EC number: DNA-directed RNA polymerase
• Source (natural): Organism: Saccharomyces cerevisiae (brewer's yeast)
• Molecular weight: Theoretical: 138.937297 KDa

Sequence

String:

MSDLANSEKY YDEDPYGFED ESAPITAEDS WAVISAFFRE KGLVSQQLDS FNQFVDYTLQ DIICEDSTLI LEQLAQHTTE SDNISRKYE ISFGKIYVTK PMVNESDGVT HALYPQEARL RNLTYSSGLF VDVKKRTYEA IDVPGRELKY ELIAEESEDD S ESGKVFIG RLPIMLRSKN CYLSEATESD LYKLKECPFD MGGYFIINGS EKVLIAQERS AGNIVQVFKK AAPSPISHVA EI RSALEKG SRFISTLQVK LYGREGSSAR TIKATLPYIK QDIPIVIIFR ALGIIPDGEI LEHICYDVND WQMLEMLKPC VED GFVIQD RETALDFIGR RGTALGIKKE KRIQYAKDIL QKEFLPHITQ LEGFESRKAF FLGYMINRLL LCALDRKDQD DRDH FGKKR LDLAGPLLAQ LFKTLFKKLT KDIFRYMQRT VEEAHDFNMK LAINAKTITS GLKYALATGN WGEQKKAMSS RAGVS QVLN RYTYSSTLSH LRRTNTPIGR DGKLAKPRQL HNTHWGLVCP AETPEGQACG LVKNLSLMSC ISVGTDPMPI ITFLSE WGM EPLEDYVPHQ SPDATRVFVN GVWHGVHRNP ARLMETLRTL RRKGDINPEV SMIRDIREKE LKIFTDAGRV YRPLFIV ED DESLGHKELK VRKGHIAKLM ATEYQDIEGG FEDVEEYTWS SLLNEGLVEY IDAEEEESIL IAMQPEDLEP AEANEEND L DVDPAKRIRV SHHATTFTHC EIHPSMILGV AASIIPFPDH NQSPRNTYQS AMGKQAMGVF LTNYNVRMDT MANILYYPQ KPLGTTRAME YLKFRELPAG QNAIVAIACY SGYNQEDSMI MNQSSIDRGL FRSLFFRSYM DQEKKYGMSI TETFEKPQRT NTLRMKHGT YDKLDDDGLI APGVRVSGED VIIGKTTPIS PDEEELGQRT AYHSKRDAST PLRSTENGIV DQVLVTTNQD G LKFVKVRV RTTKIPQIGD KFASRHGQKG TIGITYRRED MPFTAEGIVP DLIINPHAIP SRMTVAHLIE CLLSKVAALS GN EGDASPF TDITVEGISK LLREHGYQSR GFEVMYNGHT GKKLMAQIFF GPTYYQRLRH MVDDKIHARA RGPMQVLTRQ PVE GRSRDG GLRFGEMERD CMIAHGAASF LKERLMEASD AFRVHICGIC GLMTVIAKLN HNQFECKGCD NKIDIYQIHI PYAA KLLFQ ELMAMNITPR LYTDRSRDF

UniProtKB: DNA-directed RNA polymerase II subunit RPB2

Macromolecule #13: DNA-directed RNA polymerase II subunit RPB3

• Macromolecule: Name: DNA-directed RNA polymerase II subunit RPB3 / type: protein_or_peptide / ID: 13 / Number of copies: 2 / Enantiomer: LEVO
• Source (natural): Organism: Saccharomyces cerevisiae (brewer's yeast)
• Molecular weight: Theoretical: 35.330457 KDa

Sequence

String:

MSEEGPQVKI REASKDNVDF ILSNVDLAMA NSLRRVMIAE IPTLAIDSVE VETNTTVLAD EFIAHRLGLI PLQSMDIEQL EYSRDCFCE DHCDKCSVVL TLQAFGESES TTNVYSKDLV IVSNLMGRNI GHPIIQDKEG NGVLICKLRK GQELKLTCVA K KGIAKEHA KWGPAAAIEF EYDPWNKLKH TDYWYEQDSA KEWPQSKNCE YEDPPNEGDP FDYKAQADTF YMNVESVGSI PV DQVVVRG IDTLQKKVAS ILLALTQMDQ DKVNFASGDN NTASNMLGSN EDVMMTGAEQ DPYSNASQMG NTGSGGYDNA W

UniProtKB: DNA-directed RNA polymerase II subunit RPB3

Macromolecule #14: DNA-directed RNA polymerase II subunit RPB4

• Macromolecule: Name: DNA-directed RNA polymerase II subunit RPB4 / type: protein_or_peptide / ID: 14 / Number of copies: 2 / Enantiomer: LEVO
• Source (natural): Organism: Saccharomyces cerevisiae (brewer's yeast)
• Molecular weight: Theoretical: 25.451191 KDa

Sequence

String:

MNVSTSTFQT RRRRLKKVEE EENAATLQLG QEFQLKQINH QGEEEELIAL NLSEARLVIK EALVERRRAF KRSQKKHKKK HLKHENAND ETTAVEDEDD DLDEDDVNAD DDDFMHSETR EKELESIDVL LEQTTGGNNK DLKNTMQYLT NFSRFRDQET V GAVIQLLK STGLHPFEVA QLGSLACDTA DEAKTLIPSL NNKISDDELE RILKELSNLE TLY

UniProtKB: DNA-directed RNA polymerase II subunit RPB4

Macromolecule #15: DNA-directed RNA polymerases I, II, and III subunit RPABC1

• Macromolecule: Name: DNA-directed RNA polymerases I, II, and III subunit RPABC1; type: protein_or_peptide / ID: 15 / Number of copies: 2 / Enantiomer: LEVO
• Source (natural): Organism: Saccharomyces cerevisiae (brewer's yeast)
• Molecular weight: Theoretical: 25.117094 KDa

Sequence

String:

MDQENERNIS RLWRAFRTVK EMVKDRGYFI TQEEVELPLE DFKAKYCDSM GRPQRKMMSF QANPTEESIS KFPDMGSLWV EFCDEPSVG VKTMKTFVIH IQEKNFQTGI FVYQNNITPS AMKLVPSIPP ATIETFNEAA LVVNITHHEL VPKHIRLSSD E KRELLKRY RLKESQLPRI QRADPVALYL GLKRGEVVKI IRKSETSGRY ASYRICM

UniProtKB: DNA-directed RNA polymerases I, II, and III subunit RPABC1

Macromolecule #16: DNA-directed RNA polymerases I, II, and III subunit RPABC2

• Macromolecule: Name: DNA-directed RNA polymerases I, II, and III subunit RPABC2; type: protein_or_peptide / ID: 16 / Number of copies: 2 / Enantiomer: LEVO
• Source (natural): Organism: Saccharomyces cerevisiae (brewer's yeast)
• Molecular weight: Theoretical: 17.931834 KDa

Sequence

String:

MSDYEEAFND GNENFEDFDV EHFSDEETYE EKPQFKDGET TDANGKTIVT GGNGPEDFQQ HEQIRRKTLK EKAIPKDQRA TTPYMTKYE RARILGTRAL QISMNAPVFV DLEGETDPLR IAMKELAEKK IPLVIRRYLP DGSFEDWSVE ELIVDL

UniProtKB: DNA-directed RNA polymerases I, II, and III subunit RPABC2

Macromolecule #17: DNA-directed RNA polymerase II subunit RPB7

• Macromolecule: Name: DNA-directed RNA polymerase II subunit RPB7 / type: protein_or_peptide / ID: 17 / Number of copies: 2 / Enantiomer: LEVO
• Source (natural): Organism: Saccharomyces cerevisiae (brewer's yeast)
• Molecular weight: Theoretical: 19.081053 KDa

Sequence

String:

MFFIKDLSLN ITLHPSFFGP RMKQYLKTKL LEEVEGSCTG KFGYILCVLD YDNIDIQRGR ILPTDGSAEF NVKYRAVVFK PFKGEVVDG TVVSCSQHGF EVQVGPMKVF VTKHLMPQDL TFNAGSNPPS YQSSEDVITI KSRIRVKIEG CISQVSSIHA I GSIKEDYL GAI

UniProtKB: DNA-directed RNA polymerase II subunit RPB7

Macromolecule #18: DNA-directed RNA polymerases I, II, and III subunit RPABC3

• Macromolecule: Name: DNA-directed RNA polymerases I, II, and III subunit RPABC3; type: protein_or_peptide / ID: 18 / Number of copies: 2 / Enantiomer: LEVO
• Source (natural): Organism: Saccharomyces cerevisiae (brewer's yeast)
• Molecular weight: Theoretical: 16.525363 KDa

Sequence

String:

MSNTLFDDIF QVSEVDPGRY NKVCRIEAAS TTQDQCKLTL DINVELFPVA AQDSLTVTIA SSLNLEDTPA NDSSATRSWR PPQAGDRSL ADDYDYVMYG TAYKFEEVSK DLIAVYYSFG GLLMRLEGNY RNLNNLKQEN AYLLIRR

UniProtKB: DNA-directed RNA polymerases I, II, and III subunit RPABC3

Macromolecule #19: DNA-directed RNA polymerase II subunit RPB9

• Macromolecule: Name: DNA-directed RNA polymerase II subunit RPB9 / type: protein_or_peptide / ID: 19 / Number of copies: 2 / Enantiomer: LEVO
• Source (natural): Organism: Saccharomyces cerevisiae (brewer's yeast)
• Molecular weight: Theoretical: 14.308161 KDa

Sequence

String:

MTTFRFCRDC NNMLYPREDK ENNRLLFECR TCSYVEEAGS PLVYRHELIT NIGETAGVVQ DIGSDPTLPR SDRECPKCHS RENVFFQSQ QRRKDTSMVL FFVCLSCSHI FTSDQKNKRT QFS

UniProtKB: DNA-directed RNA polymerase II subunit RPB9

Macromolecule #20: DNA-directed RNA polymerases I, II, and III subunit RPABC5

• Macromolecule: Name: DNA-directed RNA polymerases I, II, and III subunit RPABC5; type: protein_or_peptide / ID: 20 / Number of copies: 2 / Enantiomer: LEVO
• Source (natural): Organism: Saccharomyces cerevisiae (brewer's yeast)
• Molecular weight: Theoretical: 8.290732 KDa

Sequence

String:

MIVPVRCFSC GKVVGDKWES YLNLLQEDEL DEGTALSRLG LKRYCCRRMI LTHVDLIEKF LRYNPLEKRD

UniProtKB: DNA-directed RNA polymerases I, II, and III subunit RPABC5

Macromolecule #21: DNA-directed RNA polymerase II subunit RPB11

• Macromolecule: Name: DNA-directed RNA polymerase II subunit RPB11 / type: protein_or_peptide / ID: 21 / Number of copies: 2 / Enantiomer: LEVO
• Source (natural): Organism: Saccharomyces cerevisiae (brewer's yeast)
• Molecular weight: Theoretical: 13.633493 KDa

Sequence

String:

MNAPDRFELF LLGEGESKLK IDPDTKAPNA VVITFEKEDH TLGNLIRAEL LNDRKVLFAA YKVEHPFFAR FKLRIQTTEG YDPKDALKN ACNSIINKLG ALKTNFETEW NLQTLAADDA F

UniProtKB: DNA-directed RNA polymerase II subunit RPB11

Macromolecule #22: DNA-directed RNA polymerases I, II, and III subunit RPABC4

• Macromolecule: Name: DNA-directed RNA polymerases I, II, and III subunit RPABC4; type: protein_or_peptide / ID: 22 / Number of copies: 2 / Enantiomer: LEVO
• Source (natural): Organism: Saccharomyces cerevisiae (brewer's yeast)
• Molecular weight: Theoretical: 7.729969 KDa

Sequence

String:

MSREGFQIPT NLDAAAAGTS QARTATLKYI CAECSSKLSL SRTDAVRCKD CGHRILLKAR TKRLVQFEAR

UniProtKB: DNA-directed RNA polymerases I, II, and III subunit RPABC4

Macromolecule #23: Transcription initiation factor IIB

• Macromolecule: Name: Transcription initiation factor IIB / type: protein_or_peptide / ID: 23 / Number of copies: 2 / Enantiomer: LEVO
• Source (natural): Organism: Saccharomyces cerevisiae (brewer's yeast)
• Molecular weight: Theoretical: 38.25734 KDa
• Recombinant expression: Organism: Escherichia coli (E. coli)

Sequence

String:

MMTRESIDKR AGRRGPNLNI VLTCPECKVY PPKIVERFSE GDVVCALCGL VLSDKLVDTR SEWRTFSNDD HNGDDPSRVG EASNPLLDG NNLSTRIGKG ETTDMRFTKE LNKAQGKNVM DKKDNEVQAA FAKITMLCDA AELPKIVKDC AKEAYKLCHD E KTLKGKSM ESIMAASILI GCRRAEVART FKEIQSLIHV KTKEFGKTLN IMKNILRGKS EDGFLKIDTD NMSGAQNLTY IP RFCSHLG LPMQVTTSAE YTAKKCKEIK EIAGKSPITI AVVSIYLNIL LFQIPITAAK VGQTLQVTEG TIKSGYKILY EHR DKLVDP QLIANGVVSL DNLPGVEKK

UniProtKB: Transcription initiation factor IIB

Macromolecule #25: TATA-box-binding protein

• Macromolecule: Name: TATA-box-binding protein / type: protein_or_peptide / ID: 25 / Number of copies: 2 / Enantiomer: LEVO
• Source (natural): Organism: Saccharomyces cerevisiae (brewer's yeast)
• Molecular weight: Theoretical: 27.042275 KDa
• Recombinant expression: Organism: Escherichia coli (E. coli)

Sequence

String:

MADEERLKEF KEANKIVFDP NTRQVWENQN RDGTKPATTF QSEEDIKRAA PESEKDTSAT SGIVPTLQNI VATVTLGCRL DLKTVALHA RNAEYNPKRF AAVIMRIREP KTTALIFASG KMVVTGAKSE DDSKLASRKY ARIIQKIGFA AKFTDFKIQN I VGSCDVKF PIRLEGLAFS HGTFSSYEPE LFPGLIYRMV KPKIVLLIFV SGKIVLTGAK QREEIYQAFE AIYPVLSEFR KM

UniProtKB: TATA-box-binding protein

Macromolecule #26: Transcription initiation factor IIF subunit alpha

• Macromolecule: Name: Transcription initiation factor IIF subunit alpha / type: protein_or_peptide / ID: 26 / Number of copies: 2 / Enantiomer: LEVO
• Source (natural): Organism: Saccharomyces cerevisiae (brewer's yeast)
• Molecular weight: Theoretical: 82.32057 KDa

Sequence

String:

MSRRNPPGSR NGGGPTNASP FIKRDRMRRN FLRMRMGQNG SNSSSPGVPN GDNSRGSLVK KDDPEYAEER EKMLLQIGVE ADAGRSNVK VKDEDPNEYN EFPLRAIPKE DLENMRTHLL KFQSKKKINP VTDFHLPVRL HRKDTRNLQF QLTRAEIVQR Q KEISEYKK KAEQERSTPN SGGMNKSGTV SLNNTVKDGS QTPTVDSVTK DNTANGVNSS IPTVTGSSVP PASPTTVSAV ES NGLSNGS TSAANGLDGN ASTANLANGR PLVTKLEDAG PAEDPTKVGM VKYDGKEVTN EPEFEEGTMD PLADVAPDGG GRA KRGNLR RKTRQLKVLD ENAKKLRFEE FYPWVMEDFD GYNTWVGSYE AGNSDSYVLL SVEDDGSFTM IPADKVYKFT ARNK YATLT IDEAEKRMDK KSGEVPRWLM KHLDNIGTTT TRYDRTRRKL KAVADQQAMD EDDRDDNSEV ELDYDEEFAD DEEAP IIDG NEQENKESEQ RIKKEMLQAN AMGLRDEEAP SENEEDELFG EKKIDEDGER IKKALQKTEL AALYSSDENE INPYLS ESD IENKENESPV KKEEDSDTLS KSKRSSPKKQ QKKATNAHVH KEPTLRVKSI KNCVIILKGD KKILKSFPEG EWNPQTT KA VDSSNNASNT VPSPIKQEEG LNSTVAEREE TPAPTITEKD IIEAIGDGKV NIKEFGKFIR RKYPGAENKK LMFAIVKK L CRKVGNDHME LKKE

UniProtKB: Transcription initiation factor IIF subunit alpha

Macromolecule #27: Transcription initiation factor IIF subunit beta

• Macromolecule: Name: Transcription initiation factor IIF subunit beta / type: protein_or_peptide / ID: 27 / Number of copies: 2 / Enantiomer: LEVO
• Source (natural): Organism: Saccharomyces cerevisiae (brewer's yeast)
• Molecular weight: Theoretical: 46.684492 KDa

Sequence

String:

MSSGSAGAPA LSNNSTNSVA KEKSGNISGD EYLSQEEEVF DGNDIENNET KVYEESLDLD LERSNRQVWL VRLPMFLAEK WRDRNNLHG QELGKIRINK DGSKITLLLN ENDNDSIPHE YDLELTKKVV ENEYVFTEQN LKKYQQRKKE LEADPEKQRQ A YLKKQERE EELKKKQQQQ KRRNNRKKFN HRVMTDRDGR DRYIPYVKTI PKKTAIVGTV CHECQVMPSM NDPNYHKIVE QR RNIVKLN NKERITTLDE TVGVTMSHTG MSMRSDNSNF LKVGREKAKS NIKSIRMPKK EILDYLFKLF DEYDYWSLKG LKE RTRQPE AHLKECLDKV ATLVKKGPYA FKYTLRPEYK KLKEEERKAT LGELADEQTG SAGDNAQGDA EADLEDEIEM EDVV

UniProtKB: Transcription initiation factor IIF subunit beta

Macromolecule #28: Transcription elongation factor S-II

• Macromolecule: Name: Transcription elongation factor S-II / type: protein_or_peptide / ID: 28 / Number of copies: 2 / Enantiomer: LEVO
• Source (natural): Organism: Saccharomyces cerevisiae (brewer's yeast)
• Molecular weight: Theoretical: 34.903551 KDa
• Recombinant expression: Organism: Escherichia coli (E. coli)

Sequence

String:

MDSKEVLVHV KNLEKNKSND AAVLEILHVL DKEFVPTEKL LRETKVGVEV NKFKKSTNVE ISKLVKKMIS SWKDAINKNK RSRQAQQHH QDHAPGNAED KTTVGESVNG VQQPASSQSD AMKQDKYVST KPRNSKNDGV DTAIYHHKLR DQVLKALYDV L AKESEHPP QSILHTAKAI ESEMNKVNNC DTNEAAYKAR YRIIYSNVIS KNNPDLKHKI ANGDITPEFL ATCDAKDLAP AP LKQKIEE IAKQNLYNAQ GATIERSVTD RFTCGKCKEK KVSYYQLQTR SADEPLTTFC TCEACGNRWK FS

UniProtKB: Transcription elongation factor S-II

Macromolecule #30: Transcription initiation factor IIA large subunit

• Macromolecule: Name: Transcription initiation factor IIA large subunit / type: protein_or_peptide / ID: 30 / Number of copies: 2 / Enantiomer: LEVO
• Source (natural): Organism: Saccharomyces cerevisiae (brewer's yeast)
• Molecular weight: Theoretical: 32.230805 KDa
• Recombinant expression: Organism: Escherichia coli (E. coli)

Sequence

String:

MSNAEASRVY EIIVESVVNE VREDFENAGI DEQTLQDLKN IWQKKLTETK VTTFSWDNQF NEGNINGVQN DLNFNLATPG VNSSEFNIK EENTGNEGLI LPNINSNNNI PHSGETNINT NTVEATNNSG ATLNTNTSGN TNADVTSQPK IEVKPEIELT I NNANITTV ENIDDESEKK DDEEKEEDVE KTRKEKEQIE QVKLQAKKEK RSALLDTDEV GSELDDSDDD YLISEGEEDG PD ENLMLCL YDKVTRTKAR WKCSLKDGVV TINRNDYTFQ KAQVEAEWV

UniProtKB: Transcription initiation factor IIA large subunit

Macromolecule #31: Transcription initiation factor IIA subunit 2

• Macromolecule: Name: Transcription initiation factor IIA subunit 2 / type: protein_or_peptide / ID: 31 / Number of copies: 2 / Enantiomer: LEVO
• Source (natural): Organism: Saccharomyces cerevisiae (brewer's yeast)
• Molecular weight: Theoretical: 13.47307 KDa
• Recombinant expression: Organism: Escherichia coli (E. coli)

Sequence

String:

MAVPGYYELY RRSTIGNSLV DALDTLISDG RIEASLAMRV LETFDKVVAE TLKDNTQSKL TVKGNLDTYG FCDDVWTFIV KNCQVTVED SHRDASQNGS GDSQSVISVD KLRIVACNSK KSE

UniProtKB: Transcription initiation factor IIA subunit 2

Macromolecule #32: Transcription initiation factor IIE subunit alpha

• Macromolecule: Name: Transcription initiation factor IIE subunit alpha / type: protein_or_peptide / ID: 32 / Number of copies: 2 / Enantiomer: LEVO
• Source (natural): Organism: Saccharomyces cerevisiae (brewer's yeast)
• Molecular weight: Theoretical: 54.804809 KDa

Sequence

String:

MDRPIDDIVK NLLKFVVRGF YGGSFVLVLD AILFHSVLAE DDLKQLLSIN KTELGPLIAR LRSDRLISIH KQREYPPNSK SVERVYYYV KYPHAIDAIK WKVHQVVQRL KDDLDKNSEP NGYMCPICLT KYTQLEAVQL LNFDRTEFLC SLCDEPLVED D SGKKNKEK QDKLNRLMDQ IQPIIDSLKK IDDSRIEENT FEIALARLIP PQNQSHAAYT YNPKKGSTMF RPGDSAPLPN LM GTALGND SSRRAGANSQ ATLHINITTA SDEVAQRELQ ERQAEEKRKQ NAVPEWHKQS TIGKTALGRL DNEEEFDPVV TAS AMDSIN PDNEPAQETS YQNNRTLTEQ EMEERENEKT LNDYYAALAK KQAKLNKEEE EEEEEEEDEE EEEEEEMEDV MDDN DETAR ENALEDEFED VTDTAGTAKT ESNTSNDVKQ ESINDKTEDA VNATATASGP SANAKPNDGD DDDDDDDDEM DIEFE DV

UniProtKB: Transcription initiation factor IIE subunit alpha

Macromolecule #33: Transcription initiation factor IIE subunit beta

• Macromolecule: Name: Transcription initiation factor IIE subunit beta / type: protein_or_peptide / ID: 33 / Number of copies: 2 / Enantiomer: LEVO
• Source (natural): Organism: Saccharomyces cerevisiae (brewer's yeast)
• Molecular weight: Theoretical: 37.050434 KDa

Sequence

String:

MSKNRDPLLA NLNAFKSKVK SAPVIAPAKV GQKKTNDTVI TIDGNTRKRT ASERAQENTL NSAKNPVLVD IKKEAGSNSS NAISLDDDD DDEDFGSSPS KKVRPGSIAA AALQANQTDI SKSHDSSKLL WATEYIQKKG KPVLVNELLD YLSMKKDDKV I ELLKKLDR IEFDPKKGTF KYLSTYDVHS PSELLKLLRS QVTFKGISCK DLKDGWPQCD ETINQLEEDS KILVLRTKKD KT PRYVWYN SGGNLKCIDE EFVKMWENVQ LPQFAELPRK LQDLGLKPAS VDPATIKRQT KRVEVKKKRQ RKGKITNTHM TGI LKDYSH RV

UniProtKB: Transcription initiation factor IIE subunit beta

Macromolecule #34: Mediator of RNA polymerase II transcription subunit 6

• Macromolecule: Name: Mediator of RNA polymerase II transcription subunit 6 / type: protein_or_peptide / ID: 34 / Number of copies: 2 / Enantiomer: LEVO
• Source (natural): Organism: Saccharomyces cerevisiae (brewer's yeast)
• Molecular weight: Theoretical: 32.844746 KDa

Sequence

String:

MNVTPLDELQ WKSPEWIQVF GLRTENVLDY FAESPFFDKT SNNQVIKMQR QFSQLNDPNA AVNMTQNIMT LPDGKNGNLE EEFAYVDPA RRQILFKYPM YMQLEEELMK LDGTEYVLSS VREPDFWVIR KQRRTNNSGV GSAKGPEIIP LQDYYIIGAN I YQSPTIFK IVQSRLMSTS YHLNSTLESL YDLIEFQPSQ GVHYKVPTDT STTATAATNG NNAGGGSNKS SVRPTGGANM AT VPSTTNV NMTVNTMGTG GQTIDNGTGR TGNGNMGITT EMLDKLMVTS IRSTPNYI

UniProtKB: Mediator of RNA polymerase II transcription subunit 6

Macromolecule #35: Mediator of RNA polymerase II transcription subunit 8

• Macromolecule: Name: Mediator of RNA polymerase II transcription subunit 8 / type: protein_or_peptide / ID: 35 / Number of copies: 2 / Enantiomer: LEVO
• Source (natural): Organism: Saccharomyces cerevisiae (brewer's yeast)
• Molecular weight: Theoretical: 25.297234 KDa

Sequence

String:

MSQSTASLVP EGNQGSLQED VSFDFNGVPG QALDAVRMRL AQLTHSLRRI RDEMSKAELP QWYTLQSQLN VTLSQLVSVT STLQHFQET LDSTVVYPLP KFPTTSHESL VTTLLRKKNI PEVDEWMKYV RETSGVTTAL LKDEEIEKLL QQDREITNWA R TTFRNEYG KHDFKNEESL SEEHASLLVR DSKPSKPFNV DDVLKFTFTG EKPIITGSTS TSSSN

UniProtKB: Mediator of RNA polymerase II transcription subunit 8

Macromolecule #36: Mediator of RNA polymerase II transcription subunit 11

• Macromolecule: Name: Mediator of RNA polymerase II transcription subunit 11; type: protein_or_peptide / ID: 36 / Number of copies: 2 / Enantiomer: LEVO
• Source (natural): Organism: Saccharomyces cerevisiae (brewer's yeast)
• Molecular weight: Theoretical: 13.324189 KDa

Sequence

String:

MQPPYIQERL KSLNDIETQL CSMLQEASQV TFIFGELKRG NESVKPQFEN HVKQFYERLD KSTTQLRKEI QLLDENVGTR LLPINVNKK ALGQDTEKME EQLDLLSAIL DPSKSK

UniProtKB: Mediator of RNA polymerase II transcription subunit 11

Macromolecule #37: Mediator of RNA polymerase II transcription subunit 17

• Macromolecule: Name: Mediator of RNA polymerase II transcription subunit 17; type: protein_or_peptide / ID: 37 / Number of copies: 2 / Enantiomer: LEVO
• Source (natural): Organism: Saccharomyces cerevisiae (brewer's yeast)
• Molecular weight: Theoretical: 78.582836 KDa

Sequence

String:

MTTEDPDSNH LSSETGIKLA LDPNLITLAL SSNPNSSLHS PTSDEPVPES AGKADTSIRL EGDELENKTK KDNDKNLKFL KNKDSLVSN PHEIYGSMPL EQLIPIILRQ RGPGFKFVDL NEKELQNEIK QLGSDSSDGH NSEKKDTDGA DENVQIGEDF M EVDYEDKD NPVDSRNETD HKTNENGETD DNIETVMTQE QFVKRRRDML EHINLAMNES SLALEFVSLL LSSVKESTGM SS MSPFLRK VVKPSSLNSD KIPYVAPTKK EYIELDILNK GWKLQSLNES KDLLRASFNK LSSILQNEHD YWNKIMQSIS NKD VIFKIR DRTSGQKLLA IKYGYEDSGS TYKHDRGIAN IRNNIESQNL DLIPHSSSVF KGTDFVHSVK KFLRVRIFTK IESE DDYIL SGESVMDRDS ESEEAETKDI RKQIQLLKKI IFEKELMYQI KKECALLISY GVSIENENKV IIELPNEKFE IELLS LDDD SIVNHEQDLP KINDKRANLM LVMLRLLLVV IFKKTLRSRI SSPHGLINLN VDDDILIIRP ILGKVRFANY KLLLKK IIK DYVLDIVPGS SITETEVERE QPQENKNIDD ENITKLNKEI RAFDKLLNIP RRELKINLPL TEHKSPNLSL MLESPNY CN ALIHIKFSAG TEANAVSFDT TFSDFKEVED FLHFIVAEYI QQKKV

UniProtKB: Mediator of RNA polymerase II transcription subunit 17

Macromolecule #38: Mediator of RNA polymerase II transcription subunit 18

• Macromolecule: Name: Mediator of RNA polymerase II transcription subunit 18; type: protein_or_peptide / ID: 38 / Number of copies: 2 / Enantiomer: LEVO
• Source (natural): Organism: Saccharomyces cerevisiae (brewer's yeast)
• Molecular weight: Theoretical: 34.316539 KDa

Sequence

String:

MVQQLSLFGS IGDDGYDLLI STLTTISGNP PLLYNSLCTV WKPNPSYDVE NVNSRNQLVE PNRIKLSKEV PFSYLIDETM MDKPLNFRI LKSFTNDKIP LNYAMTRNIL HNTVPQVTNF NSTNEDQNNS KHTEDTVNES RNSDDIIDVD MDASPAPSNE S CSPWSLQI SDIPAAGNNR SVSMQTIAET IILSSAGKNS SVSSLMNGLG YVFEFQYLTI GVKFFMKHGL ILELQKIWQI EE AGNSQIT SGGFLLKAYI NVSRGTDIDR INYTETALMN LKKELQGYIE LSVPDRQSMD SRVAHGNILI

UniProtKB: Mediator of RNA polymerase II transcription subunit 18

Macromolecule #39: Mediator of RNA polymerase II transcription subunit 20

• Macromolecule: Name: Mediator of RNA polymerase II transcription subunit 20; type: protein_or_peptide / ID: 39 / Number of copies: 2 / Enantiomer: LEVO
• Source (natural): Organism: Saccharomyces cerevisiae (brewer's yeast)
• Molecular weight: Theoretical: 22.918068 KDa

Sequence

String:

MGKSAVIFVE RATPATLTEL KDALSNSILS VRDPWSIDFR TYRCSIKNLP ADVSKLMYSI TFHHHGRQTV LIKDNSAMVT TAAAADIPP ALVFNGSSTG VPESIDTILS SKLSNIWMQR QLIKGDAGET LILDGLTVRL VNLFSSTGFK GLLIELQADE A GEFETKIA GIEGHLAEIR AKEYKTSSDS LGPDTSNEIC DLAYQYVRAL EL

UniProtKB: Mediator of RNA polymerase II transcription subunit 20

Macromolecule #40: Mediator of RNA polymerase II transcription subunit 22

• Macromolecule: Name: Mediator of RNA polymerase II transcription subunit 22; type: protein_or_peptide / ID: 40 / Number of copies: 2 / Enantiomer: LEVO
• Source (natural): Organism: Saccharomyces cerevisiae (brewer's yeast)
• Molecular weight: Theoretical: 13.875731 KDa

Sequence

String:

MSNQALYEKL EQTRTILSVK LAELINMTTI ADRNDDDEGS FAQENSELAV ATTSVMMVNN QTMQLIKNVQ DLLILTRSIK EKWLLNQIP VTEHSKVTRF DEKQIEELLD NCIETFVAEK TT

UniProtKB: Mediator of RNA polymerase II transcription subunit 22

Macromolecule #41: Mediator of RNA polymerase II transcription subunit 4

• Macromolecule: Name: Mediator of RNA polymerase II transcription subunit 4 / type: protein_or_peptide / ID: 41 / Number of copies: 2 / Enantiomer: LEVO
• Source (natural): Organism: Saccharomyces cerevisiae (brewer's yeast)
• Molecular weight: Theoretical: 32.244895 KDa

Sequence

String:

MSVQDTKAVE FSMGHIRSSS VSLVAEATSN TNSEDKLSKV QLYEDLCRYE DTLSKLVESV DRFKPNLDIA KDLIRTDEAL FENVKLLAE YDNIYRNLQK IDKDSEELDS KTRKILEILN ECHDELKALP MLEQVEFEKN TILQQRSKIN STELLDYATK L SKFTKIPP TFDKGAVGPN NFIWPAEDAL RRGMLAMASL HSKELTRIPG EEVEETEVPT VPPSQSEEQK GQMAKKEGTP KT DSFIFDG TAKEVGDEAD NTKDKEKEEN NDDALDLDLD LFDPDDF

UniProtKB: Mediator of RNA polymerase II transcription subunit 4

Macromolecule #42: Mediator of RNA polymerase II transcription subunit 7

• Macromolecule: Name: Mediator of RNA polymerase II transcription subunit 7 / type: protein_or_peptide / ID: 42 / Number of copies: 2 / Enantiomer: LEVO
• Source (natural): Organism: Saccharomyces cerevisiae (brewer's yeast)
• Molecular weight: Theoretical: 25.616062 KDa

Sequence

String:

MSNDPGNEVS SLYPPPPPYV KFFTQSNLEK LPKYKEKKAA SAKQTAPNNS NGGSEEEITC ALDYLIPPPM PKNQQYRAFG SIWQVKDQL PDLESMGLTQ LYKKSTENES TNYQYKIQEL RKLLKSLLLN YLELIGVLSI NPDMYERKVE NIRTILVNIH H LLNEYRPH QSRESLIMLL EEQLEYKRGE IREIEQVCKQ VHDKLTSIQD TLRTGSQSPP SSSQ

UniProtKB: Mediator of RNA polymerase II transcription subunit 7

Macromolecule #43: Mediator of RNA polymerase II transcription subunit 9

• Macromolecule: Name: Mediator of RNA polymerase II transcription subunit 9 / type: protein_or_peptide / ID: 43 / Number of copies: 2 / Enantiomer: LEVO
• Source (natural): Organism: Saccharomyces cerevisiae (brewer's yeast)
• Molecular weight: Theoretical: 17.400377 KDa

Sequence

String:

MNLQNNVLNQ IHQILLPTNP TLDKPNAEAT KEEFSSAENR DEKDYLTNQQ PKNLSTPSTS SNGEFIPHIF YSLHQIRKDP NNLSNQLET LTGSIRHRLK LCKSLISENE DTKDLLSKSP SEWQDIIHQR EQELQIKRDV LDDLYRKLQR

UniProtKB: Mediator of RNA polymerase II transcription subunit 9

Macromolecule #44: Mediator of RNA polymerase II transcription subunit 10

• Macromolecule: Name: Mediator of RNA polymerase II transcription subunit 10; type: protein_or_peptide / ID: 44 / Number of copies: 2 / Enantiomer: LEVO
• Source (natural): Organism: Saccharomyces cerevisiae (brewer's yeast)
• Molecular weight: Theoretical: 17.927926 KDa

Sequence

String:

MNGNSTNNEQ LQQELATTQD QVASIIESFV ELGVSIYDFP GTPEATKGMI TNLQRNVDRL YKLNVRSNDP QSSLSKVDIP LEVVQYIED GRNPDIYTRE FVEAIRRSNQ YQRGKMHGLK QLRDSLADKI VDEFPELKEP VEDIIKRTSP IDNVSNTH

UniProtKB: Mediator of RNA polymerase II transcription subunit 10

Macromolecule #45: Mediator of RNA polymerase II transcription subunit 14

• Macromolecule: Name: Mediator of RNA polymerase II transcription subunit 14; type: protein_or_peptide / ID: 45 / Number of copies: 4 / Enantiomer: LEVO
• Source (natural): Organism: Saccharomyces cerevisiae (brewer's yeast)
• Molecular weight: Theoretical: 123.500695 KDa

Sequence

String:

MTTTIGSPQM LANEERLSNE MHALKNRSEQ NGQEQQGPVK NTQLHGPSAT DPETTATQKE SLEMVPKDTS AATMTSAPPP ALPHVEINQ VSLALVIRNL TVFTMKELAQ YMKTNVHTQA NEPNSAKKIR FLQLIIFLRT QFLKLYVLVK WTRTIKQNNF H VLIDLLNW FRTTNMNVNN CIWALKSSLN SMTNAKLPNV DLVTALEVLS LGRPNLPTHN FKLSGVSNSM DMVDGMAKVP IG LILQRLK DLNLTVSIKI ALMNIPKPLN SYHIKNGRIY FTVPNEFEIQ LSTVNRQSPL FFVDLKLLFN TEAEQTVSAV TEA TSTNGD SENNEENSSS NGNNLPLNKP RLEKLINEIL LKSNDPLLSL YNFLHKYVLT LQLYMVHREF LKLANGGKFS KSNL IHNYD SKKSTITVRY WLNGKMDSKG KITIGIQRTT ESLILKWDNQ SASRAKNMPV IYNNIVSNIE GILDEIMFNH ARIIR SELL ARDIFQEDEE NSDVLLFQLP TTCVSMAPIQ LKIDLLSGQF YFRNPTPLLS NYASKINRAE GPEELARILQ QLKLDK IIH VLTTMFENTG WSCSRIIKID KPIRTQVNTG GESVVKKEDN KYAIAGNSTT NSDVSLLLQR DLFIRLPHWP LNWYLIL SI ISSKTSCVVE KRIGKIVSQR GKWNLKYLDN SNVMTVKLES ITYQKIMILQ RTILNRIINH MLIDSLNQLE IRNKICSS E MINEQKLPQY IIQGSNTNDN ISIITLELES FLEGSKALNS ILESSMFLRI DYSNSQIRLY AKFKRNTMMI QCQIDKLYI HFVQEEPLAF YLEESFTNLG IIVQYLTKFR QKLMQLVVLT DVVERLHKNF ESENFKIIAL QPNEISFKYL SNNDEDDKDC TIKISTNDD SIKNLTVQLS PSNPQHIIQP FLDNSKMDYH FIFSYLQFTS SLFKALKVIL NERGGKFHES GSQYSTMVNI G LHNLNEYQ IVYYNPQAGT KITICIELKT VLHNGRDKIQ FHIHFADVAH ITTKSPAYPM MHQVRNQVFM LDTKRLGTPE SV KPANASH AIRLGNGVAC DPSEIEPILM EIHNILKVDS NSSSS

UniProtKB: Mediator of RNA polymerase II transcription subunit 14

Macromolecule #46: Mediator of RNA polymerase II transcription subunit 19

• Macromolecule: Name: Mediator of RNA polymerase II transcription subunit 19; type: protein_or_peptide / ID: 46 / Number of copies: 2 / Enantiomer: LEVO
• Source (natural): Organism: Saccharomyces cerevisiae (brewer's yeast)
• Molecular weight: Theoretical: 24.885305 KDa

Sequence

String:

MASRVDETTV PSYYYYVDPE TTYTYQQPNP LQDLISVYGL DDISRQVART NLDGTKAVKL RKSYKNQIAD LSGKFSTIPT RENGKGGQI AHILFQNNPD MMIQPPQQGQ NMSEQQWREQ LRNRDIALFQ PPNFDWDLCS SVLSQFERSY PSEFANQNQG G AQAPFDID DLAFDLDGTG KSQSGSNSGN NSKKRKNKSS GSSMATPTHS DSHEDMKRRR LE

UniProtKB: Mediator of RNA polymerase II transcription subunit 19

Macromolecule #47: Mediator of RNA polymerase II transcription subunit 21

• Macromolecule: Name: Mediator of RNA polymerase II transcription subunit 21; type: protein_or_peptide / ID: 47 / Number of copies: 2 / Enantiomer: LEVO
• Source (natural): Organism: Saccharomyces cerevisiae (brewer's yeast)
• Molecular weight: Theoretical: 16.093368 KDa

Sequence

String:

MTDRLTQLQI CLDQMTEQFC ATLNYIDKNH GFERLTVNEP QMSDKHATVV PPEEFSNTID ELSTDIILKT RQINKLIDSL PGVDVSAEE QLRKIDMLQK KLVEVEDEKI EAIKKKEKLL RHVDSLIEDF VDGIANSKKS T

UniProtKB: Mediator of RNA polymerase II transcription subunit 21

Macromolecule #48: Mediator of RNA polymerase II transcription subunit 31

• Macromolecule: Name: Mediator of RNA polymerase II transcription subunit 31; type: protein_or_peptide / ID: 48 / Number of copies: 2 / Enantiomer: LEVO
• Source (natural): Organism: Saccharomyces cerevisiae (brewer's yeast)
• Molecular weight: Theoretical: 14.747739 KDa

Sequence

String:

MSSTNGNAPA TPSSDQNPLP TRFEVELEFI QSLANIQYVT YLLTQQQIWK SPNFKNYLKY LEYWCNPPYS QCIVYPNCLF ILKLLNGFM ESAIVNEDGL LEGLDELPKI IQLQGPQWMN EMVERWAN

UniProtKB: Mediator of RNA polymerase II transcription subunit 31

Macromolecule #49: Mediator of RNA polymerase II transcription subunit 1

• Macromolecule: Name: Mediator of RNA polymerase II transcription subunit 1 / type: protein_or_peptide / ID: 49 / Number of copies: 2 / Enantiomer: LEVO
• Source (natural): Organism: Saccharomyces cerevisiae (brewer's yeast)
• Molecular weight: Theoretical: 64.314953 KDa

Sequence

String:

MVEGDSYVET LDSMIELFKD YKPGSITLEN ITRLCQTLGL ESFTEELSNE LSRLSTASKI IVIDVDYNKK QDRIQDVKLV LASNFDNFD YFNQRDGEHE KSNILLNSLT KYPDLKAFHN NLKFLYLLDA YSHIESDSTS HNNGSSDKSL DSSNASFNNQ G KLDLFKYF TELSHYIRQC FQDNCCDFKV RTNLNDKFGI YILTQGINGK EVPLAKIYLE ENKSDSQYRF YEYIYSQETK SW INESAEN FSNGISLVME IVANAKESNY TDLIWFPEDF ISPELIIDKV TCSSNSSSSP PIIDLFSNNN YNSRIQLMND FTT KLINIK KFDISNDNLD LISEILKWVQ WSRIVLQNVF KLVSTPSSNS NSSELEPDYQ APFSTSTKDK NSSTSNTEPI PRSN RHGSV VEASRRRRSS TNKSKRPSIT EAMMLKEEGL QQFNLHEILS EPAIEEENGD SIKEHSTTMD GANDLGFTAS VSNQE NAGT DIVMEDHGVL QGTSQNYGTA TADDADIEMK DVSSKPSKPE SSVLQLIVSE DHIILDTISE CNLYDDVKCW SKFIEK FQD IVS

UniProtKB: Mediator of RNA polymerase II transcription subunit 1

Macromolecule #50: Transcription regulatory protein SNF12

• Macromolecule: Name: Transcription regulatory protein SNF12 / type: protein_or_peptide / ID: 50 / Number of copies: 2 / Enantiomer: LEVO
• Source (natural): Organism: Saccharomyces cerevisiae (brewer's yeast)
• Molecular weight: Theoretical: 63.947633 KDa

Sequence

String:

MSKVMKPSNG KGSRKSSKAA TPDTKNFFHA KKKDPVNQDK ANNASQITPT VPHSHPSDMV IPDHLAELIP ELYSFQQLVD SEKRLDHFI HLRNLHMKRM VAQWERSKLS QEFLYPHLNF PNVKFLRIFI SNVSENQPWQ MDTNNEADLM ALENATWTMR I EGRLLDNV QANDPAREKF SSFIESIVVD FKNKENDNVP STKFNAAPEE NATEGPSDKK LNLNLPLQFS LPNGDNSTTT NT DQNNATM GEETAKKDMS STTPKLESVK WQYDPNNPVD FDGLDIKRVG SENVECTISI LRKSSPEEPF MSYSPQLTAI IGL KSGTSH DAIFSIYKYI HLNELLTNDE SAFENLMGNR NNHNSNTSTS KMLDAASSQV SIVKLDTQLI TLLPSSLKES SPDT MKLTD LLSLINSTHL LPLQPIEIDY TVRVDKASTY GELVLDIEVP DVNALKFNNT QRESQIGAAE LNENARELEQ IKPKI ALQD KEITSVLSNL HESNKRYRFF KKISEDPVKA LNECIASTSN ALKVLSGDEG YNEDMVRRAN FYKENEAMLR ENIEVI LSN GRM

UniProtKB: Transcription regulatory protein SNF12

Macromolecule #51: SWI/SNF complex subunit SWI3

• Macromolecule: Name: SWI/SNF complex subunit SWI3 / type: protein_or_peptide / ID: 51 / Number of copies: 4 / Enantiomer: LEVO
• Source (natural): Organism: Saccharomyces cerevisiae (brewer's yeast)
• Molecular weight: Theoretical: 93.034164 KDa

Sequence

String:

MENTLGEGST VNASVDVDQH GNDNNSDSNA NAAVAGVANT DTAGEESQQQ DESLKDEATV PNTRDAESEA ITVTAKQQPT MQANKLDSQ ETPSTEESRA QNVFGQDNED SDNLFGETES SVSNNEANTP SIPTNPVDNE NNKPAIKEDS TIQDSNGDVK N MEDVKIQK EEEPENNTVI EGVKEESQPD ENTKEMDEVE EDDEDDDQPM ISPDNSIFGD TKSESKQLGN TSSVANTPSE IP DAHKAEQ EDIIEKTESV DKKVDSGEER NEQEREIMND HSKSANPKKT TITRVEPETF EIPQAHEIVI PSYSKWFNLE KIH SIEVQS LPEFFTNRIP SKTPEVYMRY RNFMVNSYRL NPNEYFSVTT ARRNVSGDAA ALFRLHKFLT KWGLINYQVD SKLL PKNIE PPLTSQYSTR HDAPRGLFPF ESYKPSVQLP DMAKLKKMMN TSDSESTLYK YLKESKRKYD EITHPPSTTD DENGD KNDN GGKMNNEVST STSMTGDANL LEEGETSRPL KKVKILEQID ENWSKEDLQK LLKGIQEFGA DWYKVAKNVG NKSPEQ CIL RFLQLPIEDK FLYGDGNGKG DNDNGLGPLK YAPHLPFSKS ENPVLSTIAF LVGLVNPKTV QSMTQRAIQS AESIKSQ KE EISDQKPIEH IKEGSEIAIS SLGYRSHIFA TNEERQMNFL TNELIRLQME KLDAKLNHLK KLEKFMELER KTLERQQE N LLIQRLNFNQ NSSKIVNVLS KCLNLISDSN INNSSVAEKE EIRSQIDHFK SMLSKPETLS IGKNPFNKPN IETGENHNG QSISNENDVK PISIEAPQFY RYWSA

UniProtKB: SWI/SNF complex subunit SWI3

Macromolecule #52: Transcription regulatory protein SNF6

• Macromolecule: Name: Transcription regulatory protein SNF6 / type: protein_or_peptide / ID: 52 / Number of copies: 2 / Enantiomer: LEVO
• Source (natural): Organism: Saccharomyces cerevisiae (brewer's yeast)
• Molecular weight: Theoretical: 37.652582 KDa

Sequence

String:

MGVIKKKRSH HGKASRQQYY SGVQVGGVGS MGAINNNIPS LTSFAEENNY QYGYSGSSAG MNGRSLTYAQ QQLNKQRQDF ERVRLRPEQ LSNIIHDESD TISFRSNLLK NFISSNDAFN MLSLTTVPCD RIEKSRLFSE KTIRYLMQKQ HEMKTQAAEL Q EKPLTPLK YTKLIAAAED GSRSTKDMID AVFEQDSHLR YQPDGVVVHR DDPALVGKLR GDLREAPADY WTHAYRDVLA QY HEAKERI RQKEVTAGEA QDEASLQQQQ QQDLQQQQQV VTTVASQSPH ATATEKEPVP AVVDDPLENM FGDYSNEPFN TNF DDEFGD LDAVFF

UniProtKB: Transcription regulatory protein SNF6

Macromolecule #53: SWI/SNF global transcription activator complex subunit SWP82

• Macromolecule: Name: SWI/SNF global transcription activator complex subunit SWP82; type: protein_or_peptide / ID: 53 / Number of copies: 2 / Enantiomer: LEVO
• Source (natural): Organism: Saccharomyces cerevisiae (brewer's yeast)
• Molecular weight: Theoretical: 70.366617 KDa

Sequence

String:

MLGEDEGNTV LEKGNNPSVK QGEVGAVFIV PKILIREHER VILKQILQIL DQDELVQPPL DKFPYKKLEL PKYIDELKTR DATNTSYKM IQLDAYGEKK VGSNGELFGG RHYLFNTFTF TAHMGVLLVL LQDVIKVLYQ SNATHDEDEF IVQHDQILVM E TSEEQTKF LAKNGVIPEE SKGSFKYITA RSAFVEFGAS VIAGGQRIVD DYWESLAKKQ NLSSHQRVFK LSTNLISKIS LL RPSFQNN RISNANEISA NTNNTCTIST SKFESQYPIV TEQPSAEIRE AYIENFAKGE HISAIVPGQS ISGTLELSAQ FRV PRYHSK NSFQQALQMK AMDIPIGRHE ELLAQYESQA PDGSASISLP NHIPSVNPSN KPIKRMLSSI LDINVSSSKN KKSE ENEMI KPMNKGQHKN NTSLNINGWK FESLPLKSAE NSGKQQYYRG LPLYEKNTLL ERLKQLTPNE IKELEHLHDA VFVNT GLQN VRKVRTKKWK KYWQYKAGIP IGLKRSQLDE FKNKYLKDVL AQTSVTTNFN EITNTDETIT TKRVPNPNFL GNCNIK DFK PPYIYSHVNK VPQNVAGDKT AVKLDTEVKN TNANPVVATD PVAAKPDNLA NFSNEVAMNN

UniProtKB: SWI/SNF global transcription activator complex subunit SWP82

Macromolecule #54: unsigned peptide of SWISNF

• Macromolecule: Name: unsigned peptide of SWISNF / type: protein_or_peptide / ID: 54 / Number of copies: 2 / Enantiomer: LEVO
• Source (natural): Organism: Saccharomyces cerevisiae (brewer's yeast)
• Molecular weight: Theoretical: 4.591546 KDa

Sequence

String:

(UNK)(UNK)(UNK)(UNK)(UNK)GR(UNK)(UNK)(UNK) (UNK)(UNK)P(UNK)(UNK)(UNK)(UNK)T(UNK) (UNK)VT(UNK)L(UNK)(UNK)(UNK)(UNK)(UNK) R(UNK)YLRFH(UNK)(UNK)(UNK) Y(UNK)(UNK)(UNK) (UNK)(UNK)(UNK)(UNK)

Macromolecule #55: Transcription regulatory protein SNF2

• Macromolecule: Name: Transcription regulatory protein SNF2 / type: protein_or_peptide / ID: 55 / Number of copies: 2 / Enantiomer: LEVO; EC number: Hydrolases; Acting on acid anhydrides; Acting on acid anhydrides to facilitate cellular and subcellular movement
• Source (natural): Organism: Saccharomyces cerevisiae (brewer's yeast)
• Molecular weight: Theoretical: 194.315094 KDa

Sequence

String:

MNIPQRQFSN EEVNRCYLRW QHLRNEHGMN APSVPEFIYL TKVLQFAAKQ RQELQMQRQQ QGISGSQQNI VPNSSDQAEL PNNASSHIS ASASPHLAPN MQLNGNETFS TSAHQSPIMQ TQMPLNSNGG NNMLPQRQSS VGSLNATNFS PTPANNGENA A EKPDNSNH NNLNLNNSEL QPQNRSLQEH NIQDSNVMPG SQINSPMPQQ AQMQQAQFQA QQAQQAQQAQ QAQQAQARLQ QG RRLPMTM FTAEQSELLK AQITSLKCLV NRKPIPFEFQ AVIQKSINHP PDFKRMLLSL SEFARRRQPT DQNNQSNLNG GNN TQQPGT NSHYNNTNTD NVSGLTRNAP LDSKDENFAS VSPAGPSSVH NAKNGTLDKN SQTVSGTPIT QTESKKEENE TISN VAKTA PNSNKTHTEQ NNPPKPQKPV PLNVLQDQYK EGIKVVDIDD PDMMVDSFTM PNISHSNIDY QTLLANSDHA KFTIE PGVL PVGIDTHTAT DIYQTLIALN LDTTVNDCLD KLLNDECTES TRENALYDYY ALQLLPLQKA VRGHVLQFEW HQNSLL TNT HPNFLSKIRN INVQDALLTN QLYKNHELLK LERKKTEAVA RLKSMNKSAI NQYNRRQDKK NKRLKFGHRL IATHTNL ER DEQKRAEKKA KERLQALKAN DEEAYIKLLD QTKDTRITHL LRQTNAFLDS LTRAVKDQQK YTKEMIDSHI KEASEEVD D LSMVPKMKDE EYDDDDDNSN VDYYNVAHRI KEDIKKQPSI LVGGTLKDYQ IKGLQWMVSL FNNHLNGILA DEMGLGKTI QTISLLTYLY EMKNIRGPYL VIVPLSTLSN WSSEFAKWAP TLRTISFKGS PNERKAKQAK IRAGEFDVVL TTFEYIIKER ALLSKVKWV HMIIDEGHRM KNAQSKLSLT LNTHYHADYR LILTGTPLQN NLPELWALLN FVLPKIFNSV KSFDEWFNTP F ANTGGQDK IELSEEETLL VIRRLHKVLR PFLLRRLKKD VEKELPDKVE KVVKCKMSAL QQIMYQQMLK YRRLFIGDQN NK KMVGLRG FNNQIMQLKK ICNHPFVFEE VEDQINPTRE TNDDIWRVAG KFELLDRILP KLKATGHRVL IFFQMTQIMD IME DFLRYI NIKYLRLDGH TKSDERSELL RLFNAPDSEY LCFILSTRAG GLGLNLQTAD TVIIFDTDWN PHQDLQAQDR AHRI GQKNE VRILRLITTN SVEEVILERA YKKLDIDGKV IQAGKFDNKS TSEEQEALLR SLLDAEEERR KKRESGVEEE EELKD SEIN EILARNDEEM AVLTRMDEDR SKKEEELGVK SRLLEKSELP DIYSRDIGAE LKREESESAA VYNGRGARER KTATYN DNM SEEQWLRQFE VSDDEKNDKQ ARKQRTKKED KSEAIDGNGE IKGENIDADN DGPRINNISA EDRADTDLAM NDDDFLS KK RKAGRPRGRP KKVKLEGSEN SEPPALESSP VTGDNSPSED FMDIPKPRTA GKTSVKSART STRGRGRGRG RGRGRGRG R GRPPKARNGL DYVRTPAAAT SPIDIREKVA KQALDLYHFA LNYENEAGRK LSDIFLSKPS KALYPDYYMI IKYPVAFDN INTHIETLAY NSLKETLQDF HLIFSNARIY NTEGSVVYED SLELEKVVTK KYCEIMGDNS QLDFTEFDEQ YGTRPLVLPP VVTSSVAES FTDEADSSMT EASV

UniProtKB: SWI/SNF chromatin-remodeling complex subunit SNF2

Macromolecule #56: SWI/SNF chromatin-remodeling complex subunit SWI1

• Macromolecule: Name: SWI/SNF chromatin-remodeling complex subunit SWI1 / type: protein_or_peptide / ID: 56 / Number of copies: 2 / Enantiomer: LEVO
• Source (natural): Organism: Saccharomyces cerevisiae (brewer's yeast)
• Molecular weight: Theoretical: 148.065188 KDa

Sequence

String:

MDFFNLNNNN NNNNTTTTTT TTNNNNTNNN NTNNNNNPAN NTNNNNSTGH SSNTNNNTNN NNTNTGASGV DDFQNFFDPK PFDQNLDSN NNNSNSNNND NNNSNTVASS TNFTSPTAVV NNAAPANVTG GKAANFIQNQ SPQFNSPYDS NNSNTNLNSL S PQAILAKN SIIDSSNLPL QAQQQLYGGN NNNNSTGIAN DNVITPHFIT NVQSISQNSS SSTPNTNSNS TPNANQQFLP FN NSASNNG NLTSNQLISN YAASNSMDRS SSASNEFVPN TSDNNNNSNN HNMRNNSNNK TSNNNNVTAV PAATPANTNN STS NANTVF SERAAMFAAL QQKQQQRFQA LQQQQQQQQN QQQQNQQPQQ QQQQQQNPKF LQSQRQQQQR SILQSLNPAL QEKI STELN NKQYELFMKS LIENCKKRNM PLQSIPEIGN RKINLFYLYM LVQKFGGADQ VTRTQQWSMV AQRLQISDYQ QLESI YFRI LLPYERHMIS QEGIKETQAK RIFLQQFLQE LLKKVQQQQQ AAALANANNN INSASSAPTP AAPGASVPAT AAPGTE AGI VPVSANTPKS LNSNININVN NNNIGQQQVK KPRKQRVKKK TKKELELERK EREDFQKRQQ KLLEDQQRQQ KLLLETK LR QQYEIELKKL PKVYKRSIVR NYKPLINRLK HYNGYDINYI SKIGEKIDSN KPIFLFAPEL GAINLHALSM SLQSKNLG E INTALNTLLV TSADSNLKIS LVKYPELLDS LAILGMNLLS NLSQNVVPYH RNTSDYYYED AGSNQYYVTQ HDKMVDKIF EKVNNNATLT PNDSNDEKVT ILVDSLTGNQ LPTPTPTEME PDLDTECFIS MQSTSPAVKQ WDLLPEPIRF LPNQFPLKIH RTPYLTSLK KIKDEIDDPF TKINTRGAED PKVLINDQLS TISMILRNIS FSDNNSRIMS RNFYLKRFIS DLLWLVLIHP E NFTCNRKI LNFKKDLVIV LSNISHLLEI ASSIDCLLIL ILVISFGQPK LNPMASSSSF GSESLTFNEF QLQWGKYQTF GV DILAKLF SLEKPNLNYF KSILLNKNTG NNLYDRNSNN NHKDKKLLRR LLNLYNDNNK NNNNRHNLLN DVVSFLFSAI PLQ QVLSQS ADPSLLIDQF SPVISQSLTS ILVIVQKILP LSNEVFEISE NNSDSNSNNN GNKDSSFNFN KNLPFVWLSS EENI GSGLL KLSEIILNIN NSTSKNTLLQ QQNYSKVLLP SINISCVQLI KCLVEKSICF ENCLNNDPEI LKKIASIPNL FPTDL EIFQ LFTNPSVDIQ IINQYQLLYN LKNDILTNLE

UniProtKB: SWI/SNF chromatin-remodeling complex subunit SWI1

Macromolecule #57: Regulator of Ty1 transposition protein 102

• Macromolecule: Name: Regulator of Ty1 transposition protein 102 / type: protein_or_peptide / ID: 57 / Number of copies: 2 / Enantiomer: LEVO
• Source (natural): Organism: Saccharomyces cerevisiae (brewer's yeast)
• Molecular weight: Theoretical: 17.817615 KDa

Sequence

String:

MDPQTLITKA NKVSYYGNPT SKESWRYDWY QPSKVSSNVQ QPQQQLGDME NNLEKYPFRY KTWLRNQEDE KNLQRESCED ILDLKEFDR RILKKSLMTS HTKGDTSKAT GAPSANQGDE ALSVDDIRGA VGNSEAIPGL SAGVNNDNTK ESKDVKMN

UniProtKB: Regulator of Ty1 transposition protein 102

Macromolecule #58: Actin-related protein 7

• Macromolecule: Name: Actin-related protein 7 / type: protein_or_peptide / ID: 58 / Number of copies: 2 / Enantiomer: LEVO
• Source (natural): Organism: Saccharomyces cerevisiae (brewer's yeast)
• Molecular weight: Theoretical: 53.863016 KDa

Sequence

String:

MTLNRKCVVI HNGSHRTVAG FSNVELPQCI IPSSYIKRTD EGGEAEFIFG TYNMIDAAAE KRNGDEVYTL VDSQGLPYNW DALEMQWRY LYDTQLKVSP EELPLVITMP ATNGKPDMAI LERYYELAFD KLNVPVFQIV IEPLAIALSM GKSSAFVIDI G ASGCNVTP IIDGIVVKNA VVRSKFGGDF LDFQVHERLA PLIKEENDME NMADEQKRST DVWYEASTWI QQFKSTMLQV SE KDLFELE RYYKEQADIY AKQQEQLKQM DQQLQYTALT GSPNNPLVQK KNFLFKPLNK TLTLDLKECY QFAEYLFKPQ LIS DKFSPE DGLGPLMAKS VKKAGASINS MKANTSTNPN GLGTSHINTN VGDNNSTASS SNISPEQVYS LLLTNVIITG STSL IEGME QRIIKELSIR FPQYKLTTFA NQVMMDRKIQ GWLGALTMAN LPSWSLGKWY SKEDYETLKR DRKQSQATNA TN

UniProtKB: Actin-related protein 7

Macromolecule #59: Actin-like protein ARP9

• Macromolecule: Name: Actin-like protein ARP9 / type: protein_or_peptide / ID: 59 / Number of copies: 2 / Enantiomer: LEVO
• Source (natural): Organism: Saccharomyces cerevisiae (brewer's yeast)
• Molecular weight: Theoretical: 53.13193 KDa

Sequence

String:

MAPFRQDSIL IIYPRSQTTL VQFGLNEETF TVPELEIPTQ IYRTTRQDGS YTYHSTNKDN KAELIKPIQN GEIIDISAFT QFLRLIFVS ILSDRANKNQ DAFEAELSNI PLLLITHHSW SQSDLEIITQ YVFESLEINN LIQLPASLAA TYSMISLQNC C IIDVGTHH TDIIPIVDYA QLDHLVSSIP MGGQSINDSL KKLLPQWDDD QIESLKKSPI FEVLSDDAKK LSSFDFGNEN ED EDEGTLN VAEIITSGRD TREVLEERER GQKVKNVKNS DLEFNTFWDE KGNEIKVGKQ RFQGCNNLIK NISNRVGLTL DNI DDINKA KAVWENIIIV GGTTSISGFK EALLGQLLKD HLIIEPEEEK SKREEEAKSV LPAATKKKSK FMTNSTAFVP TIEY VQCPT VIKLAKYPDY FPEWKKSGYS EIIFLGAQIV SKQIFTHPKD TFYITREKYN MKGPAALWDV QF

UniProtKB: Actin-like protein ARP9

Macromolecule #60: Mediator of RNA polymerase II transcription subunit 5

• Macromolecule: Name: Mediator of RNA polymerase II transcription subunit 5 / type: protein_or_peptide / ID: 60 / Number of copies: 3 / Enantiomer: LEVO
• Source (natural): Organism: Saccharomyces cerevisiae (brewer's yeast)
• Molecular weight: Theoretical: 128.91875 KDa

Sequence

String:

MEKESVYNLA LKCAERQLTS MEFSNLYKEF FNEKFPSLIQ EEEEDTTTTA NINEVKKASD LVDTPSNNTA ATADTTHLHE ALDIVCSDF VKILNLEKPL ILADYIVEVL LVNYNSDMIK CFLPKLNSVR NSLLLAHFFS KSCSFFAKLS DTLIIDQVRK D LGNVIVPN ILSLDMNSMN KELIAIVSKL LQTTLKLSPS PILLTSAGCK NGSFTLLNQL SQTNKLLFKR VSQTFEAKLH FK DTKPFLN KDSTNEFVGS PSLTSPQYIP SPLSSTKPPG SVNSAAKYKD MKLLRYYKNI WLNNKIINWE ISNPDFLSKY SAI TSSIFQ ESFNSVQNLD QLLTDLIETS FTCFAQFVSN KQYHQANSNL TLLERKWVIF ITKHLPLLIL ENSSRSPRVV TNAL DNIDE KVVKAIRIYF TEKDDNKTNN EDLFDDYPST SLDIRHDFIK GLIMLNLQPA SVINNYLRED QMIDTSILPT RDDLF VRNL QGIQEVVHNT NSFIISSLDT LELESITESI THDSSNGLFQ VLHNFESVAP TKQREIVKAF LSIFEDAIKE LNYNRI AKI CALLFFNFSH SLTTILSFSS PAALMKTLIK FVDLSRNGRN GSNGNDESSE YETINISLSF SWAILLIINL TQTYGIS VV DVALKYPELS IKNSFIINFI SNLPNVSDKY YLEESNVNDS DMLTKSHNTV QSWLCDLFVN GSITDQLIQN IETRQLAN L IPFIVKQVLL SVEIGVLTDI SSLIGGFEYF LQPLLLVGLI KTFYWLEQFL SCVKNDTISE DILQGIFNLL NTLFNPVTL NEDSKAFHTA VLRLNAIPLL KVLRKFRVQS QSNYGIYSSD AQGDPNLEPL IAKLVAVLNV SPVYDVDPRI INSENDYSRK QLGYGKFLI LNENPINKIM TNQINSFWSL HSSTYYNLDY LFELIELVTP KSFLFDVLKT LEYKLATYGV PGSENKRGSL D SEHVFDYF FYFLVLYDVK TAEEASQLIE YMENDAKKSK GDVDIKGEDL HEKNDSAEVR QETQPKAEAT QDDDFDMLFG EN DTSTQAY EEEEENEDND GNNRTNNVPM IKAEETPSKT NKISILKRHS FAVLLHERKL LNDLALENGE ITKTENEKFI SYH DKYLCM LKTCVF

UniProtKB: Mediator of RNA polymerase II transcription subunit 5

Macromolecule #61: Mediator of RNA polymerase II transcription subunit 16

• Macromolecule: Name: Mediator of RNA polymerase II transcription subunit 16; type: protein_or_peptide / ID: 61 / Number of copies: 3 / Enantiomer: LEVO
• Source (natural): Organism: Saccharomyces cerevisiae (brewer's yeast)
• Molecular weight: Theoretical: 111.423422 KDa

Sequence

String:

MMLGEHLMSW SKTGIIAYSD SQSSNANICL TFLESINGIN WRFHTPQKYV LHPQLHEVQY QESSSTLSTH STTTSVNGST TAGVGSTPN FGGNSNKSPP QFFYNISSIH WNNWFSLPGD MLAVCDELGN MTMLITGQRP DRATTYEKLT MVFQDNVYKI Y NHVMPLKP VDKLKPMNIE RKQTRKEYNT SILEFRWLTS SKSVIVSQFC AFDSSSNTYR SRAQQVPPYG VYHPPFIKYA CL AIRKNGQ IDFWYQFSNS KDHKKITLQL LDTSNQRFKD LQWLEFARIT PMNDDQCMLI TTYSKLSKNI SFYKLHVNWN LNA TKPNVL NDPSLKIQFI LSTTLDPTDD EGHVLKLENL HVVSKSSIEK DPSPEILVLY NVCDTSKSLV KRYRLAPTQL SAEY LVILK PDLNIDRNNS TNQIFQSRRY NLRRHSDIVL DKKVTLITSE MFDAFVSFYF EDGTIESYNQ NDWKLETERL ISQSQ LGKF KNIIASPLSA GFNYGKLPLP PSVEWMKVSP SMCGVIVKQY NKKWPQFYAA VQKNYADPEK DSINATALAF GYVKSL HKQ ISAEDLTIAA KTHILRISFL DRKRAKEFIT TLLKSLYSFF NISPDAPKEI MDKIITSRPL QKIMLLQLEL GSCFSQE NI EEMARVILYL KNVLFAFNGV ARNFHFAIEQ ISNNSNQQQN PKLFQTIFSK QDLIHSLIPV AKWFVKFITY LTQEILIL I NDPTNKEYTL VHGIFGAKMS RTLILSILNE IKKVTQIVAK FPETSYPILN ESSTFLKLVL SESPVDFEKF ETFLVDVNN KFIALCEQQP SQEREFSLLV KAEIPPEYAK VGDFLLQYAN NAVISHANAA AVYFADTSGL KISNSEFFNP EIFHLLQPLE EGLIIDTDK LPIKNRTSKS FSKLLYDDVT CDKLSVSEIS DGKLKRCSRC GSVTRAGNII SSDKTIVPTS IQTKRWPTMY T RLCICSGM LFEMDG

UniProtKB: Mediator of RNA polymerase II transcription subunit 16

Macromolecule #62: Mediator of RNA polymerase II transcription subunit 2

• Macromolecule: Name: Mediator of RNA polymerase II transcription subunit 2 / type: protein_or_peptide / ID: 62 / Number of copies: 2 / Enantiomer: LEVO
• Source (natural): Organism: Saccharomyces cerevisiae (brewer's yeast)
• Molecular weight: Theoretical: 47.75427 KDa

Sequence

String:

MVVQNSPVSS VHTANFSERG SNTRTMTYKN KLTVCFDDIL KVGAEMMMQQ QLKNVQLDSY LVNGFSQSQQ KLLKEKVKLF HGILDDLET SLSQSSSYLE TLTALGKEKE KEREEAEKKR AEQENMRKVR EQEELKKRQE LEEASQQQQL QQNSKEKNGL G LNFSTTAP ANTTDANGSK ENYQELGSLQ SSSQTQLENA NAANNGAAFS PLTTTRIQSQ QAQPSDVMFN DLNSMDISMF SG LDSTGFD STAFNATVDE TKGFDDNDSG NNYNDINISS IENNINNNIN STKNGKDNNN ESNKNNNGDE KNKNNNEDNE NNN NSSEKN NNNNNNNNNN NDDNGNNNNN NSGNDNNNTT NNDSNNKNNS ITTGNDNENI VNNDLPTTVV SNPGDNPPPA DNGE EYLTL NDFNDLNIDW STTGDNGELD LSGFNI

UniProtKB: Mediator of RNA polymerase II transcription subunit 2

Macromolecule #63: Mediator of RNA polymerase II transcription subunit 3

• Macromolecule: Name: Mediator of RNA polymerase II transcription subunit 3 / type: protein_or_peptide / ID: 63 / Number of copies: 2 / Enantiomer: LEVO
• Source (natural): Organism: Saccharomyces cerevisiae (brewer's yeast)
• Molecular weight: Theoretical: 43.116039 KDa

Sequence

String:

MDSIIPAGVK LDDLQVILAK NENETRDKVC KQINEARDEI LPLRLQFNEF IQIMANIDQE GSKQADRMAK YLHIRDKILQ LNDRFQTLS SHLEALQPLF STVPEYLKTA DNRDRSFQLL EPLSTYNKNG NAVCSTATVV STNHSAAAST PTTTATPHAN P ITHAHSLS NPNSTATMQH NPLAGKRGPK SGSTMGTPTV HNSTAAAPIA APKKPRKPRQ TKKAKAQAQA QAQAQAQVYA QQ STVQTPI TASMAAALPN PTPSMINSVS PTNVMGTPLT NMMSPMGNAY SMGAQNQGGQ VSMSQFNGSG NGSNPNTNTN SNN TPLQSQ LNLNNLTPAN ILNMSMNNDF QQQQQQQQQQ QQPQPQYNMN MGMNNMNNGG KELDSLDLNN LELGGLNMDF L

UniProtKB: Mediator of RNA polymerase II transcription subunit 3

Macromolecule #64: Mediator of RNA polymerase II transcription subunit 15

• Macromolecule: Name: Mediator of RNA polymerase II transcription subunit 15; type: protein_or_peptide / ID: 64 / Number of copies: 2 / Enantiomer: LEVO
• Source (natural): Organism: Saccharomyces cerevisiae (brewer's yeast)
• Molecular weight: Theoretical: 120.432242 KDa

Sequence

String:

MSAAPVQDKD TLSNAERAKN VNGLLQVLMD INTLNGGSSD TADKIRIHAK NFEAALFAKS SSKKEYMDSM NEKVAVMRNT YNTRKNAVT AAAANNNIKP VEQHHINNLK NSGNSANNMN VNMNLNPQMF LNQQAQARQQ VAQQLRNQQQ QQQQQQQQQR R QLTPQQQQ LVNQMKVAPI PKQLLQRIPN IPPNINTWQQ VTALAQQKLL TPQDMEAAKE VYKIHQQLLF KARLQQQQAQ AQ AQANNNN NGLPQNGNIN NNINIPQQQQ MQPPNSSANN NPLQQQSSQN TVPNVLNQIN QIFSPEEQRS LLQEAIETCK NFE KTQLGS TMTEPVKQSF IRKYINQKAL RKIQALRDVK NNNNANNNGS NLQRAQNVPM NIIQQQQQQN TNNNDTIATS ATPN AAAFS QQQNASSKLY QMQQQQQAQA QAQAQAQAQA QAQAQAQAAQ AAQAQAQAQA QAQAQAQAQA QAQAQAQAQA QAQAQ AHAQ HQPSQQPQQA QQQPNPLHGL TPTAKDVEVI KQLSLDASKT NLRLTDVTNS LSNEEKEKIK MKLKQGQKLF VQVSNF APQ VYIITKNENF LKEVFQLRIF VKEILEKCAE GIFVVKLDTV DRLIIKYQKY WESMRIQILR RQAILRQQQQ MANNNGN PG TTSTGNNNNI ATQQNMQQSL QQMQHLQQLK MQQQQQQQQQ QQQQQQQQQQ QQQQHIYPSS TPGVANYSAM ANAPGNNI P YMNHKNTSSM DFLNSMENTP KVPVSAAATP SLNKTINGKV NGRTKSNTIP VTSIPSTNKK LSISNAASQQ PTPRSASNT AKSTPNTNPS PLKTQTKNGT PNPNNMKTVQ SPMGAQPSYN SAIIENAFRK EELLLKDLEI RKLEISSRFK HRQEIFKDSP MDLFMSTLG DCLGIKDEEM LTSCTIPKAV VDHINGSGKR KPTKAAQRAR DQDSIDISIK DNKLVMKSKF NKSNRSYSIA L SNVAAIFK GIGGNFKDLS TLVHSSSPST SSNMDVGNPR KRKASVLEIS PQDSIASVLS PDSNIMSDSK KIKVDSPDDP FM TKSGATT SEKQEVTNEA PFLTSGTSSE QFNVWDWNNW TSAT

UniProtKB: Mediator of RNA polymerase II transcription subunit 15

Macromolecule #24: promoter DNA

• Macromolecule: Name: promoter DNA / type: dna / ID: 24 / Number of copies: 2 / Classification: DNA
• Source (natural): Organism: Saccharomyces cerevisiae (brewer's yeast)
• Molecular weight: Theoretical: 21.25267 KDa

Sequence

String:

(DC)(DG)(DG)(DT)(DG)(DA)(DA)(DA)(DA)(DC) (DA)(DT)(DA)(DT)(DA)(DA)(DA)(DA)(DA)(DG) (DG)(DG)(DC)(DT)(DC)(DT)(DA)(DC)(DA) (DT)(DT)(DC)(DA)(DT)(DT)(DT)(DT)(DT)(DT) (DC) (DA)(DT)(DC)(DG)(DA)(DT)(DG)(DA) (DG)(DT)(DA)(DC)(DT)(DT)(DT)(DA)(DC)(DT) (DT)(DG) (DT)(DT)(DA)(DT)(DC)(DA)(DG) (DA)(DT)

GENBANK: GENBANK: M14625.1

Macromolecule #29: promoter DNA

• Macromolecule: Name: promoter DNA / type: dna / ID: 29 / Number of copies: 2 / Classification: DNA
• Source (natural): Organism: Saccharomyces cerevisiae (brewer's yeast)
• Molecular weight: Theoretical: 21.279705 KDa

Sequence

String:

(DA)(DT)(DC)(DT)(DG)(DA)(DT)(DA)(DA)(DC) (DA)(DA)(DG)(DT)(DA)(DA)(DA)(DG)(DT)(DA) (DC)(DT)(DC)(DA)(DT)(DC)(DG)(DA)(DT) (DG)(DA)(DA)(DA)(DA)(DA)(DA)(DT)(DG)(DA) (DA) (DT)(DG)(DT)(DA)(DG)(DA)(DG)(DC) (DC)(DC)(DT)(DT)(DT)(DT)(DT)(DA)(DT)(DA) (DT)(DG) (DT)(DT)(DT)(DT)(DC)(DA)(DC) (DC)(DG)

GENBANK: GENBANK: Z36099.1

Macromolecule #65: IRON/SULFUR CLUSTER

• Macromolecule: Name: IRON/SULFUR CLUSTER / type: ligand / ID: 65 / Number of copies: 2 / Formula: SF4
• Molecular weight: Theoretical: 351.64 Da

Chemical component information

ChemComp-FS1:
IRON/SULFUR CLUSTER

Macromolecule #66: ZINC ION

• Macromolecule: Name: ZINC ION / type: ligand / ID: 66 / Number of copies: 36 / Formula: ZN
• Molecular weight: Theoretical: 65.409 Da

Macromolecule #67: MAGNESIUM ION

• Macromolecule: Name: MAGNESIUM ION / type: ligand / ID: 67 / Number of copies: 2 / Formula: MG
• Molecular weight: Theoretical: 24.305 Da

Experimental details

Structure determination

• Method: cryo EM
• Processing: single particle reconstruction
• Aggregation state: particle

Sample preparation

• Buffer: pH: 7.5
• Vitrification: Cryogen name: ETHANE

Electron microscopy

• Microscope: TFS KRIOS
• Specialist optics: Phase plate: OTHER
• Software: Name: SerialEM
• Image recording: Film or detector model: GATAN K3 (6k x 4k) / Average exposure time: 4.0 sec. / Average electron dose: 40.8 e/Ų
• Electron beam: Acceleration voltage: 300 kV / Electron source: FIELD EMISSION GUN
• Electron optics: Illumination mode: FLOOD BEAM / Imaging mode: BRIGHT FIELD / Nominal defocus max: 2.5 µm / Nominal defocus min: 1.0 µm / Nominal magnification: 64000
• Sample stage: Specimen holder model: FEI TITAN KRIOS AUTOGRID HOLDER / Cooling holder cryogen: NITROGEN
• Experimental equipment: Model: Titan Krios / Image courtesy: FEI Company

Image processing

• CTF correction: Type: PHASE FLIPPING AND AMPLITUDE CORRECTION
• Startup model: Type of model: OTHER
• Final reconstruction: Resolution.type: BY AUTHOR / Resolution: 2.8 Å / Resolution method: FSC 0.143 CUT-OFF / Software - Name: RELION (ver. 5); Details: this is the composite map , the information above is parameter of the consensus map before focused refinement for each part.; Number images used: 3090211
• Initial angle assignment: Type: MAXIMUM LIKELIHOOD
• Final angle assignment: Type: MAXIMUM LIKELIHOOD

Atomic model buiding 1

• Refinement: Protocol: RIGID BODY FIT

Output model

PDB-9pdj:
Composite map of open form of PIC-Med-SWI/SNF