[English] 日本語
- 3DEM data search -

-
Search query


Keywords
Database /
Q: What are the data sources of EM Navigator?
Data entries / weeks ago
Q: When the data are updated?
Author
Processing method
Display mode
Sort by
Num. of entries / page
Entry
Article
Sample
Experiment
Processing
Max number of data0 for all data
File format
  • CSV format (Comma-Separated Values, for Excel, etc.)
  • TSV format (Tab Separated Values, for Excel, etc.)
  • JSON format

Yorodumi Search

-
Search result

Showing 1 - 50 of 504 items for (author: campbell & p)

EMDB-55069:
Cryo-EM structure of the ARISC(E33A)-RAP80:K63-Ub7 complex (Left Arm map)
Method: single particle / : Foglizzo M, Zeqiraj E

EMDB-55070:
Cryo-EM structure of the ARISC(E33A)-RAP80:K63-Ub7 complex (Non-catalytic Ub, Left Arm map)
Method: single particle / : Foglizzo M, Zeqiraj E

EMDB-55071:
Cryo-EM structure of the ARISC(E33A)-RAP80:K63-Ub7 complex (Non-catalytic Ub, Right Arm map)
Method: single particle / : Foglizzo M, Zeqiraj E

EMDB-55072:
Cryo-EM structure of the ARISC(E33A)-RAP80:K63-Ub7 complex (Right Arm map)
Method: single particle / : Foglizzo M, Zeqiraj E

EMDB-55073:
Cryo-EM structure of the ARISC(E33A)-RAP80:K63-Ub7 complex (Ub (P1') map)
Method: single particle / : Foglizzo M, Zeqiraj E

EMDB-55074:
Cryo-EM structure of the ARISC(E33A)-RAP80:K63-Ub7 complex (Ub (P2) and Ub (P3) map)
Method: single particle / : Foglizzo M, Zeqiraj E

EMDB-55077:
Cryo-EM structure of the ARISCdC(E33A):K63-Ub7 complex (Ub (P1') map)
Method: single particle / : Foglizzo M, Degtjarik O, Zeqiraj E

EMDB-55079:
Cryo-EM structure of the ARISCdC(E33A):K63-Ub7 complex (Consensus Map)
Method: single particle / : Foglizzo M, Degtjarik O, Zeqiraj E

EMDB-55080:
Cryo-EM structure of the ARISCdC(E33A):K63-Ub7 complex (Left Arm map)
Method: single particle / : Foglizzo M, Degtjarik O, Zeqiraj E

EMDB-55081:
Cryo-EM structure of the ARISCdC(E33A):K63-Ub7 complex (Right Arm map)
Method: single particle / : Foglizzo M, Degtjarik O, Zeqiraj E

EMDB-55082:
Cryo-EM structure of the ARISCdC(E33A):K63-Ub7 complex (Ub (P2) and Ub (P3) map)
Method: single particle / : Foglizzo M, Degtjarik O, Zeqiraj E

EMDB-55085:
Cryo-EM structure of the ARISCdC(E33A):K63-Ub4 complex (Consensus map)
Method: single particle / : Foglizzo M, Degtjarik O, Zeqiraj E

EMDB-55086:
Cryo-EM structure of the ARISCdC(E33A):K63-Ub4 complex (Left Arm map)
Method: single particle / : Foglizzo M, Degtjarik O, Zeqiraj E

EMDB-55088:
Cryo-EM structure of the ARISCdC(E33A):K63-Ub4 complex (Right Arm map)
Method: single particle / : Foglizzo M, Degtjarik O, Zeqiraj E

EMDB-55089:
Cryo-EM structure of ARISCdC(E33A):K63-Ub4 complex (Ub (P1') map)
Method: single particle / : Foglizzo M, Degtjarik O, Zeqiraj E

EMDB-55090:
Cryo-EM structure of the ARISC(E33A)-RAP80:K63-Ub7 complex (Consensus Map)
Method: single particle / : Foglizzo M, Zeqiraj E

EMDB-55118:
Cryo-EM structure of the ARISCdC(E33A):K63-Ub4 complex (Composite map)
Method: single particle / : Foglizzo M, Degtjarik O, Zeqiraj E

EMDB-55119:
Cryo-EM structure of the ARISCdC(E33A):K63-Ub7 complex (Composite map)
Method: single particle / : Foglizzo M, Degtjarik O, Zeqiraj E

EMDB-55122:
Cryo-EM structure of the ARISC(E33A)-RAP80:K63-Ub7 complex (Composite map)
Method: single particle / : Foglizzo M, Zeqiraj E

PDB-9sqv:
Cryo-EM structure of the ARISCdC(E33A):K63-Ub4 complex (Composite map)
Method: single particle / : Foglizzo M, Degtjarik O, Zeqiraj E

PDB-9sqw:
Cryo-EM structure of the ARISCdC(E33A):K63-Ub7 complex (Composite map)
Method: single particle / : Foglizzo M, Degtjarik O, Zeqiraj E

PDB-9sqy:
Cryo-EM structure of the ARISC(E33A)-RAP80:K63-Ub7 complex (Composite map)
Method: single particle / : Foglizzo M, Zeqiraj E

EMDB-70641:
Monomeric ADAR2_E488Q bound to dsRNA sequence derived from human GLI1 gene
Method: single particle / : Matthews MM, Wolf M

EMDB-70719:
cryoEM structure of IRAK4:KT-474:CRBN-DDB1 ternary complex
Method: single particle / : Fei X, Ramanathan A, Diagle C, Ford M, Campbell V, Zheng X, Li H, Sintchak M, Kamadurai H, Miller R, Kazmirski S, Huang X, Weiss M, Manolfi N, Zhu X

PDB-9opj:
cryoEM structure of IRAK4:KT-474:CRBN-DDB1 ternary complex
Method: single particle / : Fei X, Ramanathan A, Diagle C, Ford M, Campbell V, Zheng X, Li H, Sintchak M, Kamadurai H, Miller R, Kazmirski S, Huang X, Weiss M, Manolfi N, Zhu X

EMDB-75283:
SemiClosed Eco-ePEC: Cryo-EM structure of Eco RNAP his-elemental paused elongation complex with a semi-closed active site (closed TL and SI3, open RH-FL)
Method: single particle / : Dhingra Y, Darst SA

EMDB-75284:
CBR9379 bound Open1 Eco-ePEC: Cryo-EM structure of Eco RNAP his-elemental paused elongation complex with an open active site (open TL, SI3 and RH-FL)
Method: single particle / : Dhingra Y, Darst SA

EMDB-75285:
CBR9379 bound Open2 Eco-ePEC: Cryo-EM structure of Eco RNAP his-elemental paused elongation complex with an open active site (open TL, SI3 and RH-FL)
Method: single particle / : Dhingra Y, Darst SA

EMDB-75286:
Closed Mtb-EC: Cryo-EM structure of Mtb RNAP elongation complex (substrate loading mimic) with a closed active site (closed TL and RH-FL)
Method: single particle / : Dhingra Y, Darst SA

EMDB-75287:
Open Mtb-EC: Cryo-EM structure of Mtb RNAP elongation complex (substrate loading mimic) with an open active site (open TL and RH-FL)
Method: single particle / : Dhingra Y, Darst SA

EMDB-75288:
SemiClosed Mtb-EC: Cryo-EM structure of Mtb RNAP elongation complex (substrate loading mimic) with a semiclosed active site (closed TL, open RH-FL)
Method: single particle / : Dhingra Y, Darst SA

EMDB-75289:
AAP-SO2 bound Open Mtb-EC: Cryo-EM structure of Mtb RNAP elongation complex (substrate loading mimic) with an open active site (open TL and RH-FL)
Method: single particle / : Dhingra Y, Darst SA

PDB-10me:
SemiClosed Eco-ePEC: Cryo-EM structure of Eco RNAP his-elemental paused elongation complex with a semi-closed active site (closed TL and SI3, open RH-FL)
Method: single particle / : Dhingra Y, Darst SA

PDB-10mf:
CBR9379 bound Open1 Eco-ePEC: Cryo-EM structure of Eco RNAP his-elemental paused elongation complex with an open active site (open TL, SI3 and RH-FL)
Method: single particle / : Dhingra Y, Darst SA

PDB-10mg:
CBR9379 bound Open2 Eco-ePEC: Cryo-EM structure of Eco RNAP his-elemental paused elongation complex with an open active site (open TL, SI3 and RH-FL)
Method: single particle / : Dhingra Y, Darst SA

PDB-10mi:
Closed Mtb-EC: Cryo-EM structure of Mtb RNAP elongation complex (substrate loading mimic) with a closed active site (closed TL and RH-FL)
Method: single particle / : Dhingra Y, Darst SA

PDB-10mj:
Open Mtb-EC: Cryo-EM structure of Mtb RNAP elongation complex (substrate loading mimic) with an open active site (open TL and RH-FL)
Method: single particle / : Dhingra Y, Darst SA

PDB-10mk:
SemiClosed Mtb-EC: Cryo-EM structure of Mtb RNAP elongation complex (substrate loading mimic) with a semiclosed active site (closed TL, open RH-FL)
Method: single particle / : Dhingra Y, Darst SA

PDB-10ml:
AAP-SO2 bound Open Mtb-EC: Cryo-EM structure of Mtb RNAP elongation complex (substrate loading mimic) with an open active site (open TL and RH-FL)
Method: single particle / : Dhingra Y, Darst SA

EMDB-54532:
Cryo-EM structure of Gephyrin in complex with Darpin 27F3, revealing linker-E domain interactions
Method: single particle / : Ortiz-Lopez D, Hove T, Schindelin H, Boettcher B

EMDB-54539:
Gephyrin E-Domain dimer of dimers - Consensus Map
Method: single particle / : Ortiz-Lopez D, Hove T, Boettcher B, Schindelin H

EMDB-54540:
Cryo-EM structure of Gephyrin E domain in complex with Darpin 27F3
Method: single particle / : Ortiz-Lopez D, Hove T, Boettcher B, Schindelin H

EMDB-54544:
Gephyrin E-Domain dimer of dimers - local refinement of dimer A
Method: single particle / : Ortiz-Lopez D, Hove T, Boettcher B, Schindelin H

EMDB-54545:
Gephyrin E-Domain dimer of dimers - local refinement of dimer B
Method: single particle / : Ortiz-Lopez D, Hove T, Boettcher B, Schindelin H

EMDB-54551:
Gephyrin dimer of dimers - combined CryoEM map
Method: single particle / : Ortiz-Lopez D, Hove T, Boettcher B, Schindelin H

PDB-9s3f:
Cryo-EM structure of Gephyrin in complex with Darpin 27F3, revealing linker-E domain interactions
Method: single particle / : Ortiz-Lopez D, Hove T, Schindelin H, Boettcher B

PDB-9s3m:
Cryo-EM structure of Gephyrin E domain in complex with Darpin 27F3
Method: single particle / : Ortiz-Lopez D, Hove T, Boettcher B, Schindelin H

PDB-9s3t:
Gephyrin dimer of dimers - combined CryoEM map
Method: single particle / : Ortiz-Lopez D, Hove T, Boettcher B, Schindelin H

EMDB-75279:
Closed Eco-ePEC: Cryo-EM structure of Eco RNAP his-elemental paused elongation complex with a closed active site (closed TL, SI3 and RH-FL)
Method: single particle / : Dhingra Y, Darst SA

EMDB-75280:
Open1 Eco-ePEC: Cryo-EM structure of Eco RNAP his-elemental paused elongation complex with an open active site (open TL, SI3 and RH-FL)
Method: single particle / : Dhingra Y, Darst SA

Pages:

+
About EMN search

-
News

-
Feb 9, 2022. New format data for meta-information of EMDB entries

New format data for meta-information of EMDB entries

  • Version 3 of the EMDB header file is now the official format.
  • The previous official version 1.9 will be removed from the archive.

Related info.:EMDB header

External links:wwPDB to switch to version 3 of the EMDB data model

-
Oct 5, 2021. Nobel Prize for mechanically activated and temperature-gated ion channels

Nobel Prize for mechanically activated and temperature-gated ion channels

  • The Nobel Prize in Physiology or Medicine 2021 was awarded jointly to David Julius and Ardem Patapoutian "for their discoveries of receptors for temperature and touch."
  • EM Navigator can help to find cryo-EM structure data by both pioneers.

External links:The Nobel Prize in Physiology or Medicine 2021 - NobelPrize.org / Structure data by Ardem Patapoutian / Structure data by David Julius

+
Aug 12, 2020. Covid-19 info

Covid-19 info

URL: https://pdbj.org/emnavi/covid19.php

New page: Covid-19 featured information page in EM Navigator.

Related info.:Covid-19 info / Mar 5, 2020. Novel coronavirus structure data

+
Mar 5, 2020. Novel coronavirus structure data

Novel coronavirus structure data

Related info.:Yorodumi Speices / Aug 12, 2020. Covid-19 info

External links:COVID-19 featured content - PDBj / Molecule of the Month (242):Coronavirus Proteases

+
Jul 5, 2019. Downlodablable text data

Downlodablable text data

Some data of EM Navigator services can be downloaded as text file. Software such as Excel can load the data files.

PageDataFormat
EMN Searchsearch resultCSV, TSV, or JSON
EMN statisticsdata tableCSV or TSV

Related info.:EMN Search / EMN Statistics

-
EMN Search

3DEM data search

Advanced data search for EMDB and EM data in PDB widh various search and display options

Related info.:EMDB / PDB / EM Navigator / Q: What are the data sources of EM Navigator? / Yorodumi Search / Jul 5, 2019. Downlodablable text data

Read more