[English] 日本語
- 3DEM data search -

-
Search query


Keywords
Database /
Q: What are the data sources of EM Navigator?
Data entries / weeks ago
Q: When the data are updated?
Author
Processing method
Display mode
Sort by
Num. of entries / page
Entry
Article
Sample
Experiment
Processing
Max number of data0 for all data
File format
  • CSV format (Comma-Separated Values, for Excel, etc.)
  • TSV format (Tab Separated Values, for Excel, etc.)
  • JSON format

Yorodumi Search

-
Search result

Showing all 41 items for (author: bowman & vd)

EMDB-5528:
Cryo-EM structure of the contracted bacteriophage T4 tail containing the collar and whiskers made of fibritin molecules.
Method: single particle / : Fokine A, Zhang Z, Kanamaru S, Bowman VD, Aksyuk AA, Arisaka F, Rao VB, Rossmann MG

EMDB-5445:
Icosahedral reconstruction of the Streptococcus phage C1 capsid
Method: single particle / : Aksyuk AA, Bowman VD, Kaufmann B, Fields C, Klose T, Holdaway HA, Fischetti VA, Rossmann MG

EMDB-5446:
Asymmetric reconstruction of the Streptococcus phage C1
Method: single particle / : Aksyuk AA, Bowman VD, Kaufmann B, Fields C, Klose T, Holdaway HA, Fischetti VA, Rossmann MG

EMDB-5409:
A 3-D cryo-electron structure of bacteriophage phi92 contractile tail
Method: single particle / : Nazarov S, Bowman VD, Leiman PG

EMDB-2063:
A 3-D cryo-electron microscopy structure of bacteriophage phi92 capsid
Method: single particle / : Browning C, Nazarov S, Bowman V, Leiman P

EMDB-2064:
A 3-D cryo-electron structure of bacteriophage phi92 baseplate
Method: single particle / : Browning C, Nazarov S, Bowman VD, Leiman PG

EMDB-5179:
The Interaction of Decay-accelerating Factor with Echovirus 7
Method: single particle / : PLEVKA P, HAFENSTEIN S, ZHANG Y, HARRIS KG, CIEFUENTE JO, BOWMAN VD, CHIPMAN PR, LIN F, MEDOF DE, BATOR CM, ROSSMANN MG

EMDB-1624:
Three-dimensional structure of the recombinant, virus-like particle of Penaeus stylirostris densovirus (PstDNV) or infectious hypodermal and hematopoietic necrosis virus (IHHNV)
Method: single particle / : Kaufmann B, Bowman VD, Li Y, Szelei J, Tijssen P, Rossmann MG

EMDB-1662:
Structural Studies of the Sputnik Virophage
Method: single particle / : Sun S, Scola BL, Bowman VD, Ryan CM, Whitelegge JP, Raoult D, Rossmann MG

EMDB-5106:
Fab from MAb B interacting with feline panleukopenia virus
Method: single particle / : Hafenstein S, Bowman VD, Sun T, Nelson CDS, Palermo LM, Chipman PR, Battisti AJ, Parrish CR, Rossmann MG

EMDB-5107:
Feline panleukopenia virus in complex with FAb from neutralizing antibody MAb 6
Method: single particle / : Hafenstein S, Bowman VD, Sun T, Nelson CDS, Palermo LM, Chipman PR, Battisti AJ, Parrish CR, Rossmann MG

EMDB-5108:
Feline panleukopenia virus in complex with FAb from neutralizing antibody MAb 8
Method: single particle / : Hafenstein S, Bowman VD, Sun T, Nelson CDS, Palermo LM, Chipman PR, Battisti AJ, Parrish CR, Rossmann MG

EMDB-5109:
Feline panleukopenia virus in complex with FAb from neutralizing antibody MAb 15
Method: single particle / : Hafenstein S, Bowman VD, Sun T, Nelson CDS, Palermo LM, Chipman PR, Battisti AJ, Parrish CR, Rossmann MG

EMDB-5110:
Feline panleukopenia virus in complex with FAb from neutralizing antibody MAb 16
Method: single particle / : Hafenstein S, Bowman VD, Sun T, Nelson CDS, Palermo LM, Chipman PR, Battisti AJ, Parrish CR, Rossmann MG

EMDB-5111:
Feline panleukopenia virus in complex with FAb from neutralizing antibody MAb E
Method: single particle / : Hafenstein S, Bowman VD, Sun T, Nelson CDS, Palermo LM, Chipman PR, Battisti AJ, Parrish CR, Rossmann MG

EMDB-5112:
Feline panleukopenia virus in complex with FAb from neutralizing antibody MAb F
Method: single particle / : Hafenstein S, Bowman VD, Sun T, Nelson CDS, Palermo LM, Chipman PR, Battisti AJ, Parrish CR, Rossmann MG

EMDB-1597:
5-fold averaged density map of Paramecium bursaria Chlorella virus-1 (PBCV-1).
Method: single particle / : Cherrier MV, Kostyuchenko VA, Xiao C, Bowman VD, Battisti AJ, Yan X, Chipman PR, Baker TS, Van Etten JL, Rossmann MG

EMDB-1572:
The T4 packaging motor, T4 procapsid with large terminase gp17 bound
Method: single particle / : Sun S, Kondabagil K, Draper B, Alam TI, Bowman VD, Zhang Z, Hegde S, Fokine A, Rossmann MG, Rao VB

EMDB-1573:
The bacteriophage T4 procapsid in the process of DNA packaging
Method: single particle / : Sun S, Kondabagil K, Draper B, Alam TI, Bowman VD, Zhang Z, Hegde S, Fokine A, Rossmann MG, Rao VB

EMDB-5010:
Crystal and cryoEM structural studies of a cell wall degrading enzyme in the bacteriophage phi29 tail
Method: single particle / : Xiang Y, Morais MC, Cohen DN, Bowman VD, Anderson DL, Rossmann MG

EMDB-5105:
Canine parvovirus in complex with FAb from neutralizing antibody MAb 14
Method: single particle / : Hafenstein S, Bowman VD, Sun T, Nelson CDS, Palermo LM, Chipman PR, Battisti AJ, Parrish CR, Rossmann MG

EMDB-1562:
CryoEM reconstructions of PV3 complexed with deglycosylated CD155
Method: single particle / : Zhang P, Mueller S, Morais MC, Bator-Kelly CM, Bowman VD, Hafenstein S, Wimmer E, Rossmann MG

EMDB-1563:
CryoEM reconstructions of PV2 complexed with deglycosylated CD155
Method: single particle / : Zhang P, Mueller S, Morais MC, Bator-Kelly CM, Bowman VD, Hafenstein S, Wimmer E, Rossmann MG

EMDB-1570:
CryoEM reconstructions of PV1 complexed with deglycosylated CD155
Method: single particle / : Zhang P, Mueller S, Morais MC, Bator-Kelly CM, Bowman VD, Hafenstein S, Wimmer E, Rossmann MG

EMDB-1506:
Crystal and cryoEM structural studies of a cell wall degrading enzyme in the bacteriophage phi29 tail
Method: single particle / : Xiang Y, Morais MC, Cohen DN, Bowman VD, Anderson DL, Rossmann MG

EMDB-1472:
Structure of bacteriophage N4 wild-type and mutants, determined by cryo-electron microscopy.
Method: single particle / : Choi KH, McPartland J, Kaganman I, Bowman VD, Rothman-Denes LB, Rossmann MG

EMDB-1475:
Structure of bacteriophage N4
Method: single particle / : Choi KH, McPartland J, Kaganman I, Bowman VD, Rothman-Denes LB, Rossmann MG

EMDB-1476:
Structure of a bacteriophage N4 mutant lacking gp65
Method: single particle / : Choi KH, McPartland J, Kaganman I, Bowman VD, Rothman-Denes LB, Rossmann MG

EMDB-1509:
Structure of a bacteriophage N4 mutant lacking gp17
Method: single particle / : Choi KH, McPartland J, Kaganman I, Bowman VD, Rothman-Denes LB, Rossmann MG

EMDB-1280:
Cryo-electron microscopy study of bacteriophage T4 displaying anthrax toxin proteins.
Method: single particle / : Fokine A, Bowman VD, Battisti AJ, Li Q, Chipman PR, Rao VB, Rossmann MG

EMDB-1393:
Cryo-EM study of the Pseudomonas bacteriophage phiKZ.
Method: single particle / : Fokine A, Battisti A, Bowman V, Efimov A, Kurochkina L, Chipman P, Mesyanzhinov V, Rossmann M

EMDB-1415:
Cryo-EM study of the Pseudomonas bacteriophage phiKZ.
Method: single particle / : Fokine A, Battisti A, Bowman V, Efimov A, Kurochkina L, Chipman P, Mesyanzhinov V, Rossmann M

EMDB-1411:
Interaction of decay-accelerating factor with coxsackievirus B3.
Method: single particle / : Hafenstein S

EMDB-1412:
Interaction of decay-accelerating factor with coxsackievirus B3.
Method: single particle / : Hafenstein S

EMDB-1333:
The structures of bacteriophages K1E and K1-5 explain processive degradation of polysaccharide capsules and evolution of new host specificities.
Method: single particle / : Leiman PG, Battisti AJ, Bowman VD, Stummeyer K, Muhlenhoff M, Gerardy-Schahn R, Scholl D, Molineux IJ

EMDB-1334:
The structures of bacteriophages K1E and K1-5 explain processive degradation of polysaccharide capsules and evolution of new host specificities.
Method: single particle / : Leiman PG, Battisti AJ, Bowman VD, Stummeyer K, Muhlenhoff M, Gerardy-Schahn R, Scholl D, Molineux IJ

EMDB-1335:
The structures of bacteriophages K1E and K1-5 explain processive degradation of polysaccharide capsules and evolution of new host specificities.
Method: single particle / : Leiman PG, Battisti AJ, Bowman VD, Stummeyer K, Muhlenhoff M, Gerardy-Schahn R, Scholl D, Molineux IJ

EMDB-1336:
The structures of bacteriophages K1E and K1-5 explain processive degradation of polysaccharide capsules and evolution of new host specificities.
Method: single particle / : Leiman PG, Battisti AJ, Bowman VD, Stummeyer K, Muhlenhoff M, Gerardy-Schahn R, Scholl D, Molineux IJ

EMDB-1337:
The structures of bacteriophages K1E and K1-5 explain processive degradation of polysaccharide capsules and evolution of new host specificities.
Method: single particle / : Leiman PG, Battisti AJ, Bowman VD, Stummeyer K, Muhlenhoff M, Gerardy-Schahn R, Scholl D, Molineux IJ

EMDB-1287:
Asymmetric binding of transferrin receptor to parvovirus capsids.
Method: single particle / : Hafenstein S, Palermo LM, Xiao C, Kostyuchenko VA, Morais M, Nelson CDS, Chipman PR, Bowman VD, Battisti AJ, Parrish CR, Rossmann MG

EMDB-1288:
Asymmetric binding of transferrin receptor to parvovirus capsids.
Method: single particle / : Hafenstein S, Palermo LM, Xiao C, Kostyuchenko VA, Morais M, Nelson CDS, Chipman PR, Bowman VD, Battisti AJ, Parrish CR, Rossmann MG

+
About EMN search

-
News

-
Feb 9, 2022. New format data for meta-information of EMDB entries

New format data for meta-information of EMDB entries

  • Version 3 of the EMDB header file is now the official format.
  • The previous official version 1.9 will be removed from the archive.

Related info.:EMDB header

External links:wwPDB to switch to version 3 of the EMDB data model

-
Oct 5, 2021. Nobel Prize for mechanically activated and temperature-gated ion channels

Nobel Prize for mechanically activated and temperature-gated ion channels

  • The Nobel Prize in Physiology or Medicine 2021 was awarded jointly to David Julius and Ardem Patapoutian "for their discoveries of receptors for temperature and touch."
  • EM Navigator can help to find cryo-EM structure data by both pioneers.

External links:The Nobel Prize in Physiology or Medicine 2021 - NobelPrize.org / Structure data by Ardem Patapoutian / Structure data by David Julius

+
Aug 12, 2020. Covid-19 info

Covid-19 info

URL: https://pdbj.org/emnavi/covid19.php

New page: Covid-19 featured information page in EM Navigator.

Related info.:Covid-19 info / Mar 5, 2020. Novel coronavirus structure data

+
Mar 5, 2020. Novel coronavirus structure data

Novel coronavirus structure data

Related info.:Yorodumi Speices / Aug 12, 2020. Covid-19 info

External links:COVID-19 featured content - PDBj / Molecule of the Month (242)：Coronavirus Proteases

+
Jul 5, 2019. Downlodablable text data

Downlodablable text data

Some data of EM Navigator services can be downloaded as text file. Software such as Excel can load the data files.

PageDataFormat
EMN Searchsearch resultCSV, TSV, or JSON
EMN statisticsdata tableCSV or TSV

Related info.:EMN Search / EMN Statistics

-
EMN Search

3DEM data search

Advanced data search for EMDB and EM data in PDB widh various search and display options

Related info.:EMDB / PDB / EM Navigator / Q: What are the data sources of EM Navigator? / Yorodumi Search / Jul 5, 2019. Downlodablable text data

Read more