[English] 日本語
- 3DEM data search -

-
Search query


Keywords
Database /
Q: What are the data sources of EM Navigator?
Data entries / weeks ago
Q: When the data are updated?
Author
Processing method
Display mode
Sort by
Num. of entries / page
Entry
Article
Sample
Experiment
Processing
Max number of data0 for all data
File format
  • CSV format (Comma-Separated Values, for Excel, etc.)
  • TSV format (Tab Separated Values, for Excel, etc.)
  • JSON format

Yorodumi Search

-
Search result

Showing 1 - 50 of 1,588 items for (author: bon & r)

EMDB-49339:
The structure of BoNT/A in complex with a neutralizing antibody 2G11
Method: single particle / : Chen B, Jin R

EMDB-72146:
Structure of the Measles virus Hemagglutinin ectodomain in complex with neutralizing antibody 1C02
Method: single particle / : Zyla D, Acciani M, Niemeyer G, Saphire EO

EMDB-72147:
Structure of the Measles virus Hemagglutinin ectodomain in complex with neutralizing antibody 1C08
Method: single particle / : Zyla D, Acciani M, Niemeyer G, Saphire EO

EMDB-72149:
Structure of the Measles virus Hemagglutinin ectodomain in complex with two neutralizing antibodies 1C08 and 4D08
Method: single particle / : Zyla D, Acciani M, Niemeyer G, Saphire EO

EMDB-72151:
Structure of the Measles virus Fusion glycoprotein ectodomain in complex with two neutralizing antibodies 4F09 and 3A12
Method: single particle / : Zyla D, Acciani M, Niemeyer G, Saphire EO

PDB-9q1z:
Structure of the Measles virus Hemagglutinin ectodomain in complex with neutralizing antibody 1C02
Method: single particle / : Zyla D, Acciani M, Niemeyer G, Saphire EO

PDB-9q20:
Structure of the Measles virus Hemagglutinin ectodomain in complex with neutralizing antibody 1C08
Method: single particle / : Zyla D, Acciani M, Niemeyer G, Saphire EO

PDB-9q24:
Structure of the Measles virus Hemagglutinin ectodomain in complex with two neutralizing antibodies 1C08 and 4D08
Method: single particle / : Zyla D, Acciani M, Niemeyer G, Saphire EO

PDB-9q26:
Structure of the Measles virus Fusion glycoprotein ectodomain in complex with two neutralizing antibodies 4F09 and 3A12
Method: single particle / : Zyla D, Acciani M, Niemeyer G, Saphire EO

EMDB-76739:
The density map of BoNT/A mutant (BoNT/A-WFY)
Method: single particle / : Jin R, Chen B

EMDB-77146:
Focused refinement of turnover filament interface of glutamine synthetase
Method: single particle / : Greene ER, Muniz RS, Kollman JM, Fraser JS

EMDB-55617:
Cryo-EM structure of the human LENG8-PCID2-DSS1 complex bound to UAP56 and RRP1B
Method: single particle / : Abbas DK, Bonneau F, Basquin J, Conti E, Schussler S, Wilkinson ME

EMDB-55619:
Cryo-EM structure of the human GANP-PCID2-DSS1 complex bound to UAP56
Method: single particle / : Abbas DK, Bonneau F, Basquin J, Conti E, Schussler S, Wilkinson ME

PDB-9t6l:
Cryo-EM structure of the human LENG8-PCID2-DSS1 complex bound to UAP56 and RRP1B
Method: single particle / : Abbas DK, Bonneau F, Basquin J, Conti E, Schussler S, Wilkinson ME

PDB-9t6n:
Cryo-EM structure of the human GANP-PCID2-DSS1 complex bound to UAP56
Method: single particle / : Abbas DK, Bonneau F, Basquin J, Conti E, Schussler S, Wilkinson ME

EMDB-52524:
Ku70/80 bound to WRN-exo
Method: single particle / : Hardwick SW, Zahid S, Chaplin AK, Ropars R, Charbonnier JB

PDB-9hzg:
Ku70/80 bound to WRN-exo
Method: single particle / : Hardwick SW, Zahid S, Chaplin AK, Ropars R, Charbonnier JB

EMDB-54186:
TRPC5 apo cryoEM map in the presence of pluronic acid (PA), state 2
Method: single particle / : Porav AS, Bon RS, Muench S

EMDB-54187:
Human TRPC5 in complex with (-) englerin A, full occupancy, state 1, on 290 nm gold foil holes (HexAuFoil)
Method: single particle / : Porav AS, Bon RS, Muench S

EMDB-54188:
Human TRPC5 in complex with (-) englerin A, full occupancy, state 2, on 290 nm gold foil holes (HexAuFoil)
Method: single particle / : Porav AS, Bon RS, Muench S

EMDB-54189:
Human TRPC5 in complex with (-) englerin A, full occupancy, intermediary desensitized state
Method: single particle / : Porav AS, Bon RS, Muench S

EMDB-54193:
Human TRPC5 in complex with (-) englerin A, partial occupancy (2EA:2LIP stoichiometry) state 1
Method: single particle / : Porav AS, Bon RS, Muench S

EMDB-54204:
Human TRPC5 in complex with (-) englerin A, mixed occupancy, state 1
Method: single particle / : Porav AS, Bon RS, Muench S

EMDB-54218:
Human TRPC5 in complex with (-) englerin A, mixed occupancy_2, state 2
Method: single particle / : Porav AS, Bon RS, Muench S

EMDB-54219:
Human TRPC5 in complex with (-) englerin A, mixed occupancy, state 2
Method: single particle / : Porav AS, Bon RS, Muench S

EMDB-54291:
Human TRPC5 in complex with (-) englerin A, partial occupancy (2EA:2LIP stoichiometry) state 2
Method: single particle / : Porav AS, Bon RS, Muench S

PDB-9rrf:
TRPC5 apo cryoEM map in the presence of pluronic acid (PA), state 2
Method: single particle / : Porav AS, Bon RS, Muench S

PDB-9rrm:
Human TRPC5 in complex with (-) englerin A, full occupancy, state 1, on 290 nm gold foil holes (HexAuFoil)
Method: single particle / : Porav AS, Bon RS, Muench S

PDB-9rrn:
Human TRPC5 in complex with (-) englerin A, full occupancy, state 2, on 290 nm gold foil holes (HexAuFoil)
Method: single particle / : Porav AS, Bon RS, Muench S

PDB-9rro:
Human TRPC5 in complex with (-) englerin A, full occupancy, intermediary desensitized state
Method: single particle / : Porav AS, Bon RS, Muench S

PDB-9rrq:
Human TRPC5 in complex with (-) englerin A, partial occupancy (2EA:2LIP stoichiometry) state 1
Method: single particle / : Porav AS, Bon RS, Muench S

PDB-9rru:
Human TRPC5 in complex with (-) englerin A, mixed occupancy, state 1
Method: single particle / : Porav AS, Bon RS, Muench S

PDB-9rsg:
Human TRPC5 in complex with (-) englerin A, mixed occupancy_2, state 2
Method: single particle / : Porav AS, Bon RS, Muench S

PDB-9rsh:
Human TRPC5 in complex with (-) englerin A, mixed occupancy, state 2
Method: single particle / : Porav AS, Bon RS, Muench S

PDB-9rvv:
Human TRPC5 in complex with (-) englerin A, partial occupancy (2EA:2LIP stoichiometry) state 2
Method: single particle / : Porav AS, Bon RS, Muench S

EMDB-70081:
Phosphonull (T175A) of stress-activating residues
Method: single particle / : Martinez-Bond EA, Lopez-Ayala I, Qiu L, Garda V, Yu Z, Williams AH

EMDB-70101:
Phosphomimetic (T209E) of stress-activating residues
Method: single particle / : Martinez-Bond EA, Lopez-Ayala I, Qiu L, Garda V, Yu Z, Williams AH

EMDB-70112:
Phosphonull (S56A) of stress-activating residues
Method: single particle / : Martinez-Bond EA, Lopez-Ayala I, Qiu L, Garda V, Yu Z, Williams AH

PDB-9o3o:
Phosphonull (T175A) of stress-activating residues
Method: single particle / : Martinez-Bond EA, Lopez-Ayala I, Qiu L, Garda V, Yu Z, Williams AH

PDB-9o4h:
Phosphomimetic (T209E) of stress-activating residues
Method: single particle / : Martinez-Bond EA, Lopez-Ayala I, Qiu L, Garda V, Yu Z, Williams AH

PDB-9o4r:
Phosphonull (S56A) of stress-activating residues
Method: single particle / : Martinez-Bond EA, Lopez-Ayala I, Qiu L, Garda V, Yu Z, Williams AH

EMDB-70144:
Phosphonull (T175A) of stress-activating residues
Method: single particle / : Martinez-Bond EA, Lopez-Ayala I, Qiu L, Garda V, Yu Z, Williams AH

PDB-9o5l:
Phosphonull (T175E) of stress-activating residues
Method: single particle / : Martinez-Bond EA, Lopez-Ayala I, Qiu L, Garda V, Yu Z, Williams AH

EMDB-70087:
Phosphonull (T209A) of stress-activating residues
Method: single particle / : Martinez-Bond EA, Lopez-Ayala I, Qiu L, Garda V, Yu Z, Williams AH

PDB-9o3z:
Phosphonull (T209A) of stress-activating residues
Method: single particle / : Martinez-Bond EA, Lopez-Ayala I, Qiu L, Garda V, Yu Z, Williams AH

EMDB-54787:
Cryo-EM structure of PfHT1 bound to 2,5-anhydro-D-mannitol
Method: single particle / : Gulati A, Suades A, Drew D

PDB-9sdl:
Cryo-EM structure of PfHT1 bound to 2,5-anhydro-D-mannitol
Method: single particle / : Gulati A, Suades A, Drew D

EMDB-63297:
Cryo-EM map of collagenase H (E416Q mutant) from Hathewaya histolytica bound to C-terminal region of collagen model peptide (Pro-Hyp-Gly)10
Method: single particle / : Oki H, Kawahara K

EMDB-63331:
Consensus map of apo collagenase H from Hathewaya histolytica
Method: single particle / : Oki H, Kawahara K

EMDB-63332:
Cryo-EM map of apo collagenase H from Hathewaya histolytica - focused map of the Peptidase-Helper-PKD1 domains
Method: single particle / : Oki H, Kawahara K

Pages:

+
About EMN search

-
News

-
Feb 9, 2022. New format data for meta-information of EMDB entries

New format data for meta-information of EMDB entries

  • Version 3 of the EMDB header file is now the official format.
  • The previous official version 1.9 will be removed from the archive.

Related info.:EMDB header

External links:wwPDB to switch to version 3 of the EMDB data model

-
Oct 5, 2021. Nobel Prize for mechanically activated and temperature-gated ion channels

Nobel Prize for mechanically activated and temperature-gated ion channels

  • The Nobel Prize in Physiology or Medicine 2021 was awarded jointly to David Julius and Ardem Patapoutian "for their discoveries of receptors for temperature and touch."
  • EM Navigator can help to find cryo-EM structure data by both pioneers.

External links:The Nobel Prize in Physiology or Medicine 2021 - NobelPrize.org / Structure data by Ardem Patapoutian / Structure data by David Julius

+
Aug 12, 2020. Covid-19 info

Covid-19 info

URL: https://pdbj.org/emnavi/covid19.php

New page: Covid-19 featured information page in EM Navigator.

Related info.:Covid-19 info / Mar 5, 2020. Novel coronavirus structure data

+
Mar 5, 2020. Novel coronavirus structure data

Novel coronavirus structure data

Related info.:Yorodumi Speices / Aug 12, 2020. Covid-19 info

External links:COVID-19 featured content - PDBj / Molecule of the Month (242)：Coronavirus Proteases

+
Jul 5, 2019. Downlodablable text data

Downlodablable text data

Some data of EM Navigator services can be downloaded as text file. Software such as Excel can load the data files.

PageDataFormat
EMN Searchsearch resultCSV, TSV, or JSON
EMN statisticsdata tableCSV or TSV

Related info.:EMN Search / EMN Statistics

-
EMN Search

3DEM data search

Advanced data search for EMDB and EM data in PDB widh various search and display options

Related info.:EMDB / PDB / EM Navigator / Q: What are the data sources of EM Navigator? / Yorodumi Search / Jul 5, 2019. Downlodablable text data

Read more