[English] 日本語
- 3DEM data search -

-
Search query


Keywords
Database /
Q: What are the data sources of EM Navigator?
Data entries / weeks ago
Q: When the data are updated?
Author
Processing method
Display mode
Sort by
Num. of entries / page
Entry
Article
Sample
Experiment
Processing
Max number of data0 for all data
File format
  • CSV format (Comma-Separated Values, for Excel, etc.)
  • TSV format (Tab Separated Values, for Excel, etc.)
  • JSON format

Yorodumi Search

-
Search result

Showing 1 - 50 of 192 items for (author: black & k)

EMDB-70660:
Human PORCN bound to inhibitor C59
Method: single particle / : Black KA, Venugopal H, Glukhova A

EMDB-70661:
Human PORCN bound to inhibitor ETC159
Method: single particle / : Black KA, Venugopal H, Glukhova A

EMDB-70662:
Apo Human PORCN
Method: single particle / : Black KA, Venugopal H, Glukhova A

PDB-9oo6:
Human PORCN bound to inhibitor C59
Method: single particle / : Black KA, Venugopal H, Glukhova A

PDB-9oo7:
Human PORCN bound to inhibitor ETC159
Method: single particle / : Black KA, Venugopal H, Glukhova A

PDB-9oo8:
Apo Human PORCN
Method: single particle / : Black KA, Venugopal H, Glukhova A

EMDB-70812:
Tetrameric POLQ Helicase-like Domain Bound to Cmpd 19, a Small-Molecule ATPase Inhibitor and Drug Candidate Analog
Method: single particle / : Zahn KE, Scapin G

EMDB-70813:
Tetrameric POLQ Helicase-like Domain Bound to Cmpd 36, a Small-Molecule ATPase Inhibitor and Drug Candidate Analog
Method: single particle / : Zahn KE, Scapin G

PDB-9osw:
Tetrameric POLQ Helicase-like Domain Bound to Cmpd 19, a Small-Molecule ATPase Inhibitor and Drug Candidate Analog
Method: single particle / : Zahn KE, Mader P, Sicheri F

PDB-9osy:
Tetrameric POLQ Helicase-like Domain Bound to Cmpd 36, a Small-Molecule ATPase Inhibitor and Drug Candidate Analog
Method: single particle / : Zahn KE, Mader P, Sicheri F

EMDB-49872:
Ciliary tip central pair
Method: single particle / : Legal TL, Bui KH

EMDB-70819:
13PF microtubule symmetry expansion
Method: subtomogram averaging / : Bui KH, Legal TL

EMDB-70821:
Tip CP C1 Wild Type
Method: subtomogram averaging / : Legal T, Bui KH

EMDB-70823:
Tip CP C2 WT
Method: subtomogram averaging / : Legal T, Bui KH

EMDB-70829:
SPEF1 KO Tip CP C1
Method: subtomogram averaging / : Legal T, Bui KH

EMDB-70830:
SPEF1 KO Tip CP C2
Method: subtomogram averaging / : Legal T, Bui KH

EMDB-71226:
Refinement C1 PF2-3-4
Method: single particle / : Legal TL, Bui KH

EMDB-71227:
Refinement C1 PF13-1-2
Method: single particle / : Legal TL, Bui KH

EMDB-71228:
Refinement C1 PF4-5-6
Method: single particle / : Legal TL, Bui KH

EMDB-71229:
Refinement C1 PF6-7-8
Method: single particle / : Legal TL, Bui KH

EMDB-71230:
Refinement C1 PF8-9-10
Method: single particle / : Legal TL, Bui KH

EMDB-71231:
Refinement C1 PF10-11-12-13
Method: single particle / : Legal TL, Bui KH

EMDB-71232:
Refinement C2 PF13-1-2
Method: single particle / : Legal TL, Bui KH

EMDB-71233:
Refinement C2 PF2-3-4
Method: single particle / : Legal TL, Bui KH

EMDB-71234:
Refinement C2 PF4-5-6
Method: single particle / : Legal TL, Bui KH

EMDB-71235:
Refinement C2 PF6-7-8
Method: single particle / : Legal TL, Bui KH

EMDB-71236:
Refinement C2 PF8-9-10
Method: single particle / : Legal TL, Bui KH

EMDB-71237:
Refinement C2 PF10-11-12-13
Method: single particle / : Legal TL, Bui KH

PDB-9nw3:
Ciliary tip central pair
Method: single particle / : Legal TL, Bui KH

PDB-9ot2:
13PF microtubule symmetry expansion
Method: subtomogram averaging / : Bui KH, Legal TL

EMDB-49760:
SPEF1 bound to 14-pf microtubule
Method: subtomogram averaging / : Legal T, Bui KH

EMDB-49903:
SPEF1 bound to 13-PF microtubule
Method: subtomogram averaging / : Legal T, Bui KH

PDB-9ntm:
SPEF1 bound to 14-pf microtubule
Method: subtomogram averaging / : Legal T, Bui KH

EMDB-42428:
Protein Phosphatase 2A B55 subunit in complex with IER5
Method: single particle / : Jones DTD, Cao R, Rawson SD, Blacklow SC

PDB-8uo5:
Protein Phosphatase 2A B55 subunit in complex with IER5
Method: single particle / : Jones DTD, Cao R, Rawson SD, Blacklow SC

EMDB-44860:
Kinetochore on isolated human mitotic chromosome
Method: electron tomography / : Kixmoeller K, Chang YW, Black BE

EMDB-44862:
Kinetochore on isolated human mitotic chromosome after degradation of CENP-C
Method: electron tomography / : Kixmoeller K, Chang YW, Black BE

EMDB-44863:
Kinetochore on isolated human mitotic chromosome after degradation of CENP-N
Method: electron tomography / : Kixmoeller K, Chang YW, Black BE

EMDB-44864:
Kinetochore on isolated human mitotic chromosome under conditions of prolonged spindle detachment
Method: electron tomography / : Kixmoeller K, Chang YW, Black BE

EMDB-43499:
Engineered peptide-specific binder in complex with HLA-DR1/CLIP
Method: single particle / : Jude KM, Yang X, Du H, Kassardjian A, Julien JP, Huang P, Garcia KC

PDB-8vsj:
Engineered peptide-specific binder in complex with HLA-DR1/CLIP
Method: single particle / : Jude KM, Yang X, Du H, Kassardjian A, Julien JP, Huang P, Garcia KC

EMDB-19366:
Influenza polymerase A/H7N9-4M (ENDO(R) | Core1)
Method: single particle / : Arragain B, Cusack S

EMDB-19367:
Influenza polymerase A/H7N9-4M (ENDO(R) | Core2)
Method: single particle / : Arragain B, Cusack S

EMDB-19368:
Influenza polymerase A/H7N9-4M replication complex, an asymmetric polymerase dimer bound to human ANP32A
Method: single particle / : Arragain B, Cusack S

EMDB-19369:
Influenza polymerase A/H7N9-4M replicase minus 627(R) (from "Influenza polymerase A/H7N9-4M replication complex" | Local refinement)
Method: single particle / : Arragain B, Cusack S

EMDB-19382:
Influenza polymerase A/H7N9-4M encapsidase plus 627(R) / human ANP32A (from "Influenza polymerase A/H7N9-4M replication complex" | Local refinement)
Method: single particle / : Arragain B, Cusack S

EMDB-19383:
Influenza B polymerase, monomeric encapsidase with 5' cRNA hook bound
Method: single particle / : Arragain B, Cusack S

EMDB-19384:
Monomeric apo-influenza B polymerase, encapsidase conformation
Method: single particle / : Arragain B, Cusack S

EMDB-19385:
Pseudo-symmetrical influenza B polymerase apo-dimer, encapsidase moiety (from "Influenza B polymerase pseudo-symmetrical dimer" | Local refinement)
Method: single particle / : Arragain B, Cusack S

EMDB-19386:
Pseudo-symmetrical influenza B polymerase apo-dimer, ENDO(T) moiety (from "Influenza B polymerase pseudo-symmetrical dimer" | Local refinement)
Method: single particle / : Arragain B, Cusack S

Pages:

+
About EMN search

-
News

-
Feb 9, 2022. New format data for meta-information of EMDB entries

New format data for meta-information of EMDB entries

  • Version 3 of the EMDB header file is now the official format.
  • The previous official version 1.9 will be removed from the archive.

Related info.:EMDB header

External links:wwPDB to switch to version 3 of the EMDB data model

-
Oct 5, 2021. Nobel Prize for mechanically activated and temperature-gated ion channels

Nobel Prize for mechanically activated and temperature-gated ion channels

  • The Nobel Prize in Physiology or Medicine 2021 was awarded jointly to David Julius and Ardem Patapoutian "for their discoveries of receptors for temperature and touch."
  • EM Navigator can help to find cryo-EM structure data by both pioneers.

External links:The Nobel Prize in Physiology or Medicine 2021 - NobelPrize.org / Structure data by Ardem Patapoutian / Structure data by David Julius

+
Aug 12, 2020. Covid-19 info

Covid-19 info

URL: https://pdbj.org/emnavi/covid19.php

New page: Covid-19 featured information page in EM Navigator.

Related info.:Covid-19 info / Mar 5, 2020. Novel coronavirus structure data

+
Mar 5, 2020. Novel coronavirus structure data

Novel coronavirus structure data

Related info.:Yorodumi Speices / Aug 12, 2020. Covid-19 info

External links:COVID-19 featured content - PDBj / Molecule of the Month (242):Coronavirus Proteases

+
Jul 5, 2019. Downlodablable text data

Downlodablable text data

Some data of EM Navigator services can be downloaded as text file. Software such as Excel can load the data files.

PageDataFormat
EMN Searchsearch resultCSV, TSV, or JSON
EMN statisticsdata tableCSV or TSV

Related info.:EMN Search / EMN Statistics

-
EMN Search

3DEM data search

Advanced data search for EMDB and EM data in PDB widh various search and display options

Related info.:EMDB / PDB / EM Navigator / Q: What are the data sources of EM Navigator? / Yorodumi Search / Jul 5, 2019. Downlodablable text data

Read more