[English] 日本語
EMN search
- 3DEM data search -

-
Search query


Keywords
Database /
Q: What are the data sources of EM Navigator?
Data entries / weeks ago
Q: When the data are updated?
Author
Processing method
Display mode
Sort by
Num. of entries / page
Entry
Article
Sample
Experiment
Processing
Max number of data0 for all data
File format
  • CSV format (Comma-Separated Values, for Excel, etc.)
  • TSV format (Tab Separated Values, for Excel, etc.)
  • JSON format

Yorodumi Search

-
Search result

Showing 1 - 50 of 62 items for (author: ball & ka)

EMDB-40815:
BG505 SOSIP.664 in complex with wk26 human polyclonal antibodies C3V5, V1V3, N611 and base from participant 017

EMDB-40816:
BG505 SOSIP.664 in complex with wk26 human polyclonal antibodies gp41-N611/FP and base from participant 03

EMDB-40817:
BG505 SOSIP.664 in complex with wk26 human polyclonal antibodies gp41-N611/FP and base from participant 07

EMDB-40818:
BG505 SOSIP.664 in complex with wk26 human polyclonal antibodies gp120-GH and base from participant 09

EMDB-40819:
BG505 SOSIP.664 in complex with wk26 human polyclonal antibodies C3V5, V1V3, gp41-GH/FP and base from participant 11

EMDB-19276:
Cryo-EM of tetrameric collagenase-cleaved Xenopus ZP2-N2N3 (cleaved xZP2-N2N3) (C1)

EMDB-19277:
Cryo-EM of tetrameric collagenase-cleaved Xenopus ZP2-N2N3 (cleaved xZP2-N2N3) (C2)

EMDB-18043:
Helical structure of the influenza A virus ribonucleoprotein-like

EMDB-18044:
Focused reconstruction of influenza A RNP-like particle

PDB-8pzp:
Model for influenza A virus helical ribonucleoprotein-like structure

PDB-8pzq:
Model for focused reconstruction of influenza A RNP-like particle

EMDB-26840:
Focused refinement of the Raptor-TFEB-Rag-Ragulator complex with Raptor mask

EMDB-26842:
Focused refinement of the Raptor-TFEB-Rag-Ragulator complex with c-Rag-Ragulator mask

EMDB-26843:
Focused refinement of the Raptor-TFEB-Rag-Ragulator complex with TFEB-nc-Rag-Ragulator mask

EMDB-26844:
Homogeneous refinement of the Raptor-TFEB-Rag-Ragulator complex

EMDB-26846:
Composite cryo-EM map of the Raptor-TFEB-Rag-Ragulator complex

EMDB-26852:
Cryo-EM structure of the mTORC1-TFEB-Rag-Ragulator complex with C2 symmetry

EMDB-26857:
cryo-EM structure of the mTORC1-TFEB-Rag-Ragulator complex with symmetry expansion

EMDB-26861:
A composite cryo-EM map of the mTORC1-TFEB-Rag-Ragulator complex

PDB-7ux2:
cryo-EM structure of the Raptor-TFEB-Rag-Ragulator complex

PDB-7uxc:
cryo-EM structure of the mTORC1-TFEB-Rag-Ragulator complex with symmetry expansion

PDB-7uxh:
cryo-EM structure of the mTORC1-TFEB-Rag-Ragulator complex

EMDB-27704:
Cryo-EM structure of insulin receptor (IR) bound with S597 peptide

EMDB-27705:
Cryo-EM structure of insulin receptor (IR) bound with S597 component 2

EMDB-13427:
Structure of a fully assembled T-cell receptor engaging a tumor-associated peptide-MHC I

PDB-7phr:
Structure of a fully assembled T-cell receptor engaging a tumor-associated peptide-MHC I

EMDB-26322:
MVV cleaved synaptic complex (CSC) intasome at 3.4 A resolution

PDB-7u32:
MVV cleaved synaptic complex (CSC) intasome at 3.4 A resolution

EMDB-14453:
MVV strand transfer complex (STC) intasome in complex with LEDGF/p75 at 3.5 A resolution

EMDB-13185:
Helical structure of the toxin MakA from Vibrio cholera

PDB-7p3r:
Helical structure of the toxin MakA from Vibrio cholera

EMDB-13025:
Coxsackievirus A24v in complex with a pentavalent N-acetylneuraminic acid conjugate

EMDB-11593:
The structure of HAdV-D56

EMDB-11594:
The structure of HAdV-D56 in complex with CD46

EMDB-10295:
Human endogenous retrovirus (HML2) mature capsid assembly, T=1 icosahedron

EMDB-10296:
Human endogenous retrovirus (HML2) mature capsid assembly, D5 capsule

EMDB-10297:
Human endogenous retrovirus (HML2) mature capsid assembly, D6 capsule

EMDB-10298:
Human endogenous retrovirus (HML2) mature capsid assembly, T=3 icosahedron

PDB-6ssj:
Human endogenous retrovirus (HML2) mature capsid assembly, T=1 icosahedron

PDB-6ssk:
Human endogenous retrovirus (HML2) mature capsid assembly, D5 capsule

PDB-6ssl:
Human endogenous retrovirus (HML2) mature capsid assembly, D6 capsule

PDB-6ssm:
Human endogenous retrovirus (HML2) mature capsid assembly, T=3 icosahedron

EMDB-4789:
The pore structure of Clostridium perfringens epsilon toxin

PDB-6rb9:
The pore structure of Clostridium perfringens epsilon toxin

EMDB-3641:
Unraveling the self-assembly of Pseudomonas aeruginosa XcpQ secretin periplasmic domain provides new molecular insights into T2SS secreton architecture & dynamics

EMDB-3649:
Unraveling the self-assembly of Pseudomonas aeruginosa XcpQ secretin periplasmic domain provides new molecular insights into T2SS secreton architecture & dynamics

EMDB-3608:
Non-loaded encapsulin particles with icosahedral symmetry

EMDB-3609:
Non-loaded encapsulin particles

EMDB-3612:
DyP Encapsulin particle with imposed icosahedral symmetry

EMDB-3613:
DyP Encapsulin particle with imposed C3 symmetry

Pages:

+
About EMN search

-
News

-
Feb 9, 2022. New format data for meta-information of EMDB entries

New format data for meta-information of EMDB entries

  • Version 3 of the EMDB header file is now the official format.
  • The previous official version 1.9 will be removed from the archive.

Related info.:EMDB header

External links:wwPDB to switch to version 3 of the EMDB data model

-
Oct 5, 2021. Nobel Prize for mechanically activated and temperature-gated ion channels

Nobel Prize for mechanically activated and temperature-gated ion channels

  • The Nobel Prize in Physiology or Medicine 2021 was awarded jointly to David Julius and Ardem Patapoutian "for their discoveries of receptors for temperature and touch."
  • EM Navigator can help to find cryo-EM structure data by both pioneers.

External links:The Nobel Prize in Physiology or Medicine 2021 - NobelPrize.org / Structure data by Ardem Patapoutian / Structure data by David Julius

+
Aug 12, 2020. Covid-19 info

Covid-19 info

URL: https://pdbjlvh1.pdbj.org/emnavi/covid19.php

New page: Covid-19 featured information page in EM Navigator.

Related info.:Covid-19 info / Mar 5, 2020. Novel coronavirus structure data

+
Mar 5, 2020. Novel coronavirus structure data

Novel coronavirus structure data

Related info.:Yorodumi Speices / Aug 12, 2020. Covid-19 info

External links:COVID-19 featured content - PDBj / Molecule of the Month (242):Coronavirus Proteases

+
Jul 5, 2019. Downlodablable text data

Downlodablable text data

Some data of EM Navigator services can be downloaded as text file. Software such as Excel can load the data files.

PageDataFormat
EMN Searchsearch resultCSV, TSV, or JSON
EMN statisticsdata tableCSV or TSV

Related info.:EMN Search / EMN Statistics

-
EMN Search

3DEM data search

Advanced data search for EMDB and EM data in PDB widh various search and display options

Related info.:EMDB / PDB / EM Navigator / Q: What are the data sources of EM Navigator? / Yorodumi Search / Jul 5, 2019. Downlodablable text data

Read more