[English] 日本語
- 3DEM data search -

-
Search query


Keywords
Database /
Q: What are the data sources of EM Navigator?
Data entries / weeks ago
Q: When the data are updated?
Author
Processing method
Display mode
Sort by
Num. of entries / page
Entry
Article
Sample
Experiment
Processing
Max number of data0 for all data
File format
  • CSV format (Comma-Separated Values, for Excel, etc.)
  • TSV format (Tab Separated Values, for Excel, etc.)
  • JSON format

Yorodumi Search

-
Search result

Showing 1 - 50 of 1,606 items for (author: bai & x)

EMDB-66140:
Cryo-EM structure of the insect sex pheromone receptor ApisOR22-Orco heterocomplex bound with nepetalactone in the closed state.
Method: single particle / : Dong Z, Wang YD, Guan ZY, Wang GR, Yin P

PDB-9wpe:
Cryo-EM structure of the insect sex pheromone receptor ApisOR22-Orco heterocomplex bound with nepetalactone in the closed state.
Method: single particle / : Dong Z, Wang YD, Guan ZY, Wang GR, Yin P

EMDB-65931:
Cryo-EM consensus map of PSI-LHCI-LHCII supercomplex from Euglena gracilis
Method: single particle / : Huang GQ, Dong SS, Sui SF, Qin XC

EMDB-65939:
Cryo-EM focused refinement map of LHC-(6-9) from Euglena gracilis
Method: single particle / : Huang GQ, Dong SS, Sui SF, Qin XC

EMDB-65940:
Cryo-EM focused refinement map of LHC-10 of the PSI-LHCI-LHCII supercomplex from Euglena gracilis
Method: single particle / : Huang GQ, Dong SS, Sui SF, Qin XC

EMDB-66931:
Cryo-EM structure of Hsp90(E47A)-FKBP8 complex
Method: single particle / : Ge M, Li Z, Bai Z, Zhang Y, Zhang Z

PDB-9xj8:
Cryo-EM structure of Hsp90(E47A)-FKBP8 complex
Method: single particle / : Ge M, Li Z, Bai Z, Zhang Y, Zhang Z

EMDB-72694:
Cryo-EM structure of wild-type human CNNM4 tetramer with Magnesium and MgATP in outward-facing state
Method: single particle / : Bai Z, Zhou E, Lu W, Du J

EMDB-72696:
Cryo-EM structure of human CNNM4(D262C) tetramer with Magnesium and MgATP in occluded state
Method: single particle / : Bai Z, Zhou E, Lu W, Du J

EMDB-72697:
Cryo-EM structure of human CNNM4(K113A/R140A/R141A) tetramer with Magnesium and MgATP in outward-facing state
Method: single particle / : Bai Z, Zhou E, Lu W, Du J

EMDB-75682:
Cryo-EM structure of human CNNM4(E284A) tetramer with Magnesium and MgATP in outward-facing state
Method: single particle / : Bai Z, Zhou XE, Lu W, Du J

PDB-11gq:
Cryo-EM structure of human CNNM4(E284A) tetramer with Magnesium and MgATP in outward-facing state
Method: single particle / : Bai Z, Zhou XE, Lu W, Du J

PDB-9y9d:
Cryo-EM structure of wild-type human CNNM4 tetramer with Magnesium and MgATP in outward-facing state
Method: single particle / : Bai Z, Zhou E, Lu W, Du J

PDB-9y9f:
Cryo-EM structure of human CNNM4(D262C) tetramer with Magnesium and MgATP in occluded state
Method: single particle / : Bai Z, Zhou E, Lu W, Du J

PDB-9y9g:
Cryo-EM structure of human CNNM4(K113A/R140A/R141A) tetramer with Magnesium and MgATP in outward-facing state
Method: single particle / : Bai Z, Zhou E, Lu W, Du J

EMDB-74236:
Cryo-EM structure of IGFBP7 dodecamer. The 3D refinement was focused on the central part of the dodecamer, which contains 12 IgC2 domains.
Method: single particle / : Cai K, Zhang XW, Bai XC

EMDB-74245:
Cryo-EM structure of IGFBP7 dodecamer.
Method: single particle / : Cai K, Zhang XW, Bai XC

PDB-9zhh:
Cryo-EM structure of IGFBP7 dodecamer. The 3D refinement was focused on the central part of the dodecamer, which contains 12 IgC2 domains.
Method: single particle / : Cai K, Zhang XW, Bai XC

PDB-9zhq:
Cryo-EM structure of IGFBP7 dodecamer.
Method: single particle / : Cai K, Zhang XW, Bai XC

EMDB-53558:
pro-TGF-beta1 in complex with the third TB Domain from Latent Transforming Growth Factor-beta Binding Protein-1
Method: single particle / : Biggin G, Snee M, Godwin A, Roseman A, Baldock C

PDB-9r3s:
pro-TGF-beta1 in complex with the third TB Domain from Latent Transforming Growth Factor-beta Binding Protein-1
Method: single particle / : Biggin G, Snee M, Godwin A, Roseman A, Baldock C

EMDB-80928:
Local refinement of the mpox virus A35R protein in complexed with 17H1 Fab
Method: single particle / : Xiao YX, He MZ

PDB-26wc:
Local refinement of the mpox virus A35R protein in complexed with 17H1 Fab
Method: single particle / : Xiao YX, He MZ

EMDB-65411:
Human cytosolic ribosome isolated from 1mM neomycin treated cells, class non rotated state with P/P-site and E/E-site tRNAs
Method: single particle / : Zhu L, Jia C, Wu M, Li W

EMDB-65412:
Human cytosolic ribosome in complex with neomycin, class partially rotated state with E/E-site tRNAs, SERBP1 and eEF2
Method: single particle / : Zhu L, Jia C, Wu M, Li W

EMDB-65413:
Human cytosolic ribosome isolated from 1mM neomycin treated cells, class partially rotated state with E/E-site tRNAs, eEF2 and SERBP1
Method: single particle / : Zhu L, Jia C, Wu M, Li W

EMDB-65414:
Human cytosolic ribosome isolated from 1mM neomycin treated cells, class rotated state with A/A-site and P/E-site tRNAs
Method: single particle / : Zhu L, Jia C, Wu M, Li W

EMDB-65415:
Human cytosolic ribosome isolated from 1mM neomycin treated cells, class rotated state with A/P-site and P/E-site tRNAs
Method: single particle / : Zhu L, Jia C, Wu M, Li W

EMDB-65416:
Human cytosolic ribosome isolated from 3mM neomycin treated cells, class non rotated state with P/P-site and E/E-site tRNAs
Method: single particle / : Zhu L, Jia C, Wu M, Li W

EMDB-65417:
Human cytosolic ribosome isolated from 3mM antibiotic neomycin treated cells, class partially rotated state with E/E-site tRNAs, eEF2 and SERBP1
Method: single particle / : Zhu L, Jia C, Wu M, Li W

EMDB-65418:
Human cytosolic ribosome isolated from 3mM neomycin treated cells, class rotated state with A/P-site and P/E-site tRNAs
Method: single particle / : Zhu L, Jia C, Wu M, Li W

EMDB-65419:
Human cytosolic ribosome in complex with neomycin, class non rotated state with P/P-site and E/E-site tRNAs
Method: single particle / : Zhu L, Jia C, Wu M, Li W

EMDB-65420:
Large subunit of human mitoribosome isolated from 1mM neomycin treated cells
Method: single particle / : Zhu L, Jia C, Wu M, Li W

EMDB-65421:
Human mitoribosome isolated from 1mM neomycin treated cells, class non rotated state with P/P-site and E/E-site tRNAs
Method: single particle / : Zhu L, Jia C, Wu M, Li W

EMDB-65422:
Human mitoribosome isolated from 1mM neomycin treated cells, class non rotated state with A/A-site, P/P-site and E/E-site tRNAs
Method: single particle / : Zhu L, Jia C, Wu M, Li W

EMDB-65423:
Human mitoribosome isolated from 1mM neomycin treated cells, class partially rotated state with A/A-site and P/P-site tRNAs
Method: single particle / : Zhu L, Jia C, Wu M, Li W

EMDB-65424:
Human mitoribosome isolated from 1mM neomycin treated cells, class partially rotated state with A/P-site and P/E-site tRNAs
Method: single particle / : Zhu L, Jia C, Wu M, Li W

EMDB-65425:
Human mitoribosome isolated from 1mM neomycin treated cells, class rotated state with P/E-site tRNAs
Method: single particle / : Zhu L, Jia C, Wu M, Li W

EMDB-65426:
Human mitoribosome in complex with neomycin, class non rotated state with A/A-site, P/P-site and E/E-site tRNAs
Method: single particle / : Zhu L, Jia C, Wu M, Li W

EMDB-65427:
Human mitoribosome in complex with neomycin, class partially rotated state with A/A-site, P/P-site and E/E-site tRNAs
Method: single particle / : Zhu L, Jia C, Wu M, Li W

EMDB-65428:
Human mitoribosome in complex with neomycin, class partially rotated state with A/P-site and P/E-site tRNAs
Method: single particle / : Zhu L, Jia C, Wu M, Li W

EMDB-65429:
Human mitoribosome in complex with neomycin, class rotated state
Method: single particle / : Zhu L, Jia C, Wu M, Li W

EMDB-65431:
Human mitoribosome in complex with neomycin, class rotated state with A/P-site and P/E-site tRNAs
Method: single particle / : Zhu L, Jia C, Wu M, Li W

EMDB-65433:
Cryo-EM map of the human mitoribosome in a non-rotated state, with multiple neomycin molecules bound, featuring A/A-site and P/P-site tRNAs
Method: single particle / : Zhu L, Jia C, Wu M, Li W

EMDB-65434:
Cryo-EM map of the human cytosolic ribosome in a rotated state, with multiple neomycin molecules bound, featuring A/P-site and P/E-site tRNAs
Method: single particle / : Zhu L, Jia C, Wu M, Li W

EMDB-74415:
HSV-1 UL32 tripentamer
Method: single particle / : Bailey EJ, Devarkar SC, Xiong Y, Didychuk AL

EMDB-74418:
Human cytomegalovirus UL52 3-mer
Method: single particle / : Bailey EJ, Devarkar SC, Xiong Y, Didychuk AL

EMDB-74419:
Human cytomegalovirus UL52 4-mer
Method: single particle / : Bailey EJ, Devarkar SC, Xiong Y, Didychuk AL

PDB-9zly:
HSV-1 UL32 tripentamer
Method: single particle / : Bailey EJ, Devarkar SC, Xiong Y, Didychuk AL

PDB-9zm2:
Human cytomegalovirus UL52 4-mer
Method: single particle / : Bailey EJ, Devarkar SC, Xiong Y, Didychuk AL

Pages:

+
About EMN search

-
News

-
Feb 9, 2022. New format data for meta-information of EMDB entries

New format data for meta-information of EMDB entries

  • Version 3 of the EMDB header file is now the official format.
  • The previous official version 1.9 will be removed from the archive.

Related info.:EMDB header

External links:wwPDB to switch to version 3 of the EMDB data model

-
Oct 5, 2021. Nobel Prize for mechanically activated and temperature-gated ion channels

Nobel Prize for mechanically activated and temperature-gated ion channels

  • The Nobel Prize in Physiology or Medicine 2021 was awarded jointly to David Julius and Ardem Patapoutian "for their discoveries of receptors for temperature and touch."
  • EM Navigator can help to find cryo-EM structure data by both pioneers.

External links:The Nobel Prize in Physiology or Medicine 2021 - NobelPrize.org / Structure data by Ardem Patapoutian / Structure data by David Julius

+
Aug 12, 2020. Covid-19 info

Covid-19 info

URL: https://pdbj.org/emnavi/covid19.php

New page: Covid-19 featured information page in EM Navigator.

Related info.:Covid-19 info / Mar 5, 2020. Novel coronavirus structure data

+
Mar 5, 2020. Novel coronavirus structure data

Novel coronavirus structure data

Related info.:Yorodumi Speices / Aug 12, 2020. Covid-19 info

External links:COVID-19 featured content - PDBj / Molecule of the Month (242)：Coronavirus Proteases

+
Jul 5, 2019. Downlodablable text data

Downlodablable text data

Some data of EM Navigator services can be downloaded as text file. Software such as Excel can load the data files.

PageDataFormat
EMN Searchsearch resultCSV, TSV, or JSON
EMN statisticsdata tableCSV or TSV

Related info.:EMN Search / EMN Statistics

-
EMN Search

3DEM data search

Advanced data search for EMDB and EM data in PDB widh various search and display options

Related info.:EMDB / PDB / EM Navigator / Q: What are the data sources of EM Navigator? / Yorodumi Search / Jul 5, 2019. Downlodablable text data

Read more