[English] 日本語
- 3DEM data search -

-
Search query


Keywords
Database /
Q: What are the data sources of EM Navigator?
Data entries / weeks ago
Q: When the data are updated?
Author
Processing method
Display mode
Sort by
Num. of entries / page
Entry
Article
Sample
Experiment
Processing
Max number of data0 for all data
File format
  • CSV format (Comma-Separated Values, for Excel, etc.)
  • TSV format (Tab Separated Values, for Excel, etc.)
  • JSON format

Yorodumi Search

-
Search result

Showing 1 - 50 of 4,339 items for (author: anna & p)

EMDB-49897:
Alpha7-nicotinic acetylcholine receptor bound to conotoxin ImI
Method: single particle / : Stowell MHB, Hibbs RE, Noviello CM, Bhattacharjee B

EMDB-49898:
Alpha7-nicotinic acetylcholine receptor bound to conotoxin ImII
Method: single particle / : Stowell MHB, Hibbs RE, Noviello CM, Bhattacharjee B

EMDB-49899:
Muscle-type nicotinic acetylcholine receptor bound to conotoxin ImII
Method: single particle / : Stowell MHB, Hibbs RE, Noviello CM, Bhattacharjee B

PDB-9nx0:
Alpha7-nicotinic acetylcholine receptor bound to conotoxin ImI
Method: single particle / : Stowell MHB, Hibbs RE, Noviello CM, Bhattacharjee B

PDB-9nx1:
Alpha7-nicotinic acetylcholine receptor bound to conotoxin ImII
Method: single particle / : Stowell MHB, Hibbs RE, Noviello CM, Bhattacharjee B

PDB-9nx2:
Muscle-type nicotinic acetylcholine receptor bound to conotoxin ImII
Method: single particle / : Stowell MHB, Hibbs RE, Noviello CM, Bhattacharjee B

EMDB-49892:
Cryo-EM structure of DDB1dB:CRBN:mezigdomide:SALL4(392-449)
Method: single particle / : Park J, Hunkeler M, Roy Burman SS, Fishcer ES

EMDB-49893:
Cryo-EM structure of DDB1dB:CRBN:mezigdomide:SALL4(392-449;G416A)
Method: single particle / : Park J, Hunkeler M, Roy Burman SS, Fischer ES

PDB-9nws:
Cryo-EM structure of DDB1dB:CRBN:mezigdomide:SALL4(392-449)
Method: single particle / : Park J, Hunkeler M, Roy Burman SS, Fishcer ES

PDB-9nwt:
Cryo-EM structure of DDB1dB:CRBN:mezigdomide:SALL4(392-449;G416A)
Method: single particle / : Park J, Hunkeler M, Roy Burman SS, Fischer ES

EMDB-49942:
Cryo-EM structure of CDK2/CyclinE1 in complex with CRBN/DDB1 and Cpd 24
Method: single particle / : Collier P, Zheng X, Ford M, Weiss M, Aversa R, Chen D, Li K, Growney JD, Yang A, Sathappa M, Breitkopf SB, Enerson B, Sawant R, Su L, Howarth L, Liang T, Paul A, Sharma K, Williams J, Kwiatkowski NP

PDB-9nyr:
Cryo-EM structure of CDK2/CyclinE1 in complex with CRBN/DDB1 and Cpd 24
Method: single particle / : Collier P, Zheng X, Ford M, Weiss M, Aversa R, Chen D, Li K, Growney JD, Yang A, Sathappa M, Breitkopf SB, Enerson B, Sawant R, Su L, Howarth L, Liang T, Paul A, Sharma K, Williams J, Kwiatkowski NP

EMDB-53065:
Respiratory supercomplex from Mycobacterium smegmatis with decylubiquinone
Method: single particle / : Kovalova T, Krol S, Brzezinski P, Hogbom M

PDB-9qef:
Respiratory supercomplex from Mycobacterium smegmatis with decylubiquinone
Method: single particle / : Kovalova T, Krol S, Brzezinski P, Hogbom M

EMDB-47765:
Week 26 C3V5, gp41-GH and gp41-base epitope polyclonal antibodies from participant 202 in complex with ConM SOSIP
Method: single particle / : Lin RN, Torres JL, Tran AS, Ozorowski G, Ward AB

EMDB-70288:
Cryo-EM structure of EBV gB prefusion construct C3-GT
Method: single particle / : McCool RS, McLellan JS

PDB-9oal:
Cryo-EM structure of EBV gB prefusion construct C3-GT
Method: single particle / : McCool RS, McLellan JS

EMDB-73297:
GTPBP1*GCP*Phe-tRNA*ribosome in the GTPase activation-like state, Structure III
Method: single particle / : Susorov D, Korostelev AA

EMDB-73311:
GTPBP1*GDP*Phe-tRNA*ribosome in the post-GTP hydrolysis state, Structure IV
Method: single particle / : Susorov D, Korostelev AA

PDB-9ypg:
GTPBP1*GCP*Phe-tRNA*ribosome in the GTPase activation-like state, Structure III
Method: single particle / : Susorov D, Korostelev AA

PDB-9ypw:
GTPBP1*GDP*Phe-tRNA*ribosome in the post-GTP hydrolysis state, Structure IV
Method: single particle / : Susorov D, Korostelev AA

EMDB-53861:
Yeast 80S with nascent chain in complex with Ssb1-ADP in the S2 state
Method: single particle / : Grundmann L, Zhang Y, Grishkovskaya I, Rospert S, Haselbach D

PDB-9r9p:
Yeast 80S with nascent chain in complex with Ssb1-ADP in the S2 state
Method: single particle / : Grundmann L, Zhang Y, Grishkovskaya I, Rospert S, Haselbach D

EMDB-73314:
Ribosome with accommodated A-site tRNA, Structure V
Method: single particle / : Susorov D, Korostelev AA

EMDB-73315:
Vacant ribosome with P-site tRNA, substate 1, Structure Ia
Method: single particle / : Susorov D, Korostelev AA

PDB-9ypy:
Ribosome with accommodated A-site tRNA, Structure V
Method: single particle / : Susorov D, Korostelev AA

PDB-9ypz:
Vacant ribosome with P-site tRNA, substate 1, Structure Ia
Method: single particle / : Susorov D, Korostelev AA

EMDB-50618:
GTP bound in de novo transcription initiation T. thermophilus RNA polymerase complex with TC DNA template
Method: single particle / : Skerlova J, Dubankova A, Svachova H, Kouba T

EMDB-50622:
Ap3G bound in de novo transcription initiation T. thermophilus RNA polymerase complex with TC DNA template
Method: single particle / : Skerlova J, Dubankova A, Svachova H, Kouba T

EMDB-50625:
Ap4G bound in de novo transcription initiation T. thermophilus RNA polymerase complex with TC DNA template
Method: single particle / : Skerlova J, Dubankova A, Svachova H, Kouba T

EMDB-50634:
Ap4A bound in de novo transcription initiation T. thermophilus RNA polymerase complex with TC DNA template
Method: single particle / : Skerlova J, Dubankova A, Svachova H, Kouba T

EMDB-50715:
Ap4A bound in de novo transcription initiation T. thermophilus RNA polymerase complex with aTT DNA template
Method: single particle / : Skerlova J, Dubankova A, Svachova H, Kouba T

EMDB-53711:
Transcription initiation T. thermophilus RNA polymerase complex with anti-scrunched TC DNA template
Method: single particle / : Skerlova J, Dubankova A, Svachova H, Kouba T

PDB-9fo6:
GTP bound in de novo transcription initiation T. thermophilus RNA polymerase complex with TC DNA template
Method: single particle / : Skerlova J, Dubankova A, Svachova H, Kouba T

PDB-9fog:
Ap3G bound in de novo transcription initiation T. thermophilus RNA polymerase complex with TC DNA template
Method: single particle / : Skerlova J, Dubankova A, Svachova H, Kouba T

PDB-9fok:
Ap4G bound in de novo transcription initiation T. thermophilus RNA polymerase complex with TC DNA template
Method: single particle / : Skerlova J, Dubankova A, Svachova H, Kouba T

PDB-9fp3:
Ap4A bound in de novo transcription initiation T. thermophilus RNA polymerase complex with TC DNA template
Method: single particle / : Skerlova J, Dubankova A, Svachova H, Kouba T

PDB-9frj:
Ap4A bound in de novo transcription initiation T. thermophilus RNA polymerase complex with aTT DNA template
Method: single particle / : Skerlova J, Dubankova A, Svachova H, Kouba T

PDB-9r75:
Transcription initiation T. thermophilus RNA polymerase complex with anti-scrunched TC DNA template
Method: single particle / : Skerlova J, Dubankova A, Svachova H, Kouba T

EMDB-73302:
GTPBP1*GCP*Phe-tRNA*ribosome in the open state, Structure IIa
Method: single particle / : Susorov D, Korostelev AA

EMDB-73307:
GTPBP1*GCP*Phe-tRNA*ribosome in the open state, Structure IIb
Method: single particle / : Susorov D, Korostelev AA

EMDB-73308:
GTPBP1*GCP*Phe-tRNA*ribosome in the open state, Structure IIc
Method: single particle / : Susorov D, Korostelev AA

EMDB-73310:
GTPBP1*GCP*Phe-tRNA*ribosome in the open state, Structure IId
Method: single particle / : Susorov D, Korostelev AA

EMDB-73316:
Vacant ribosome with P-site tRNA, substate 2, Structure Ib
Method: single particle / : Susorov D, Korostelev AA

EMDB-73317:
Vacant ribosome with P-site tRNA, substate 3, Structure Ic
Method: single particle / : Susorov D, Korostelev AA

PDB-9ypo:
GTPBP1*GCP*Phe-tRNA*ribosome in the open state, Structure IIa
Method: single particle / : Susorov D, Korostelev AA

PDB-9yps:
GTPBP1*GCP*Phe-tRNA*ribosome in the open state, Structure IIb
Method: single particle / : Susorov D, Korostelev AA

PDB-9ypt:
GTPBP1*GCP*Phe-tRNA*ribosome in the open state, Structure IIc
Method: single particle / : Susorov D, Korostelev AA

PDB-9ypv:
GTPBP1*GCP*Phe-tRNA*ribosome in the open state, Structure IId
Method: single particle / : Susorov D, Korostelev AA

PDB-9yq0:
Vacant ribosome with P-site tRNA, substate 2, Structure Ib
Method: single particle / : Susorov D, Korostelev AA

Pages:

+
About EMN search

-
News

-
Feb 9, 2022. New format data for meta-information of EMDB entries

New format data for meta-information of EMDB entries

  • Version 3 of the EMDB header file is now the official format.
  • The previous official version 1.9 will be removed from the archive.

Related info.:EMDB header

External links:wwPDB to switch to version 3 of the EMDB data model

-
Oct 5, 2021. Nobel Prize for mechanically activated and temperature-gated ion channels

Nobel Prize for mechanically activated and temperature-gated ion channels

  • The Nobel Prize in Physiology or Medicine 2021 was awarded jointly to David Julius and Ardem Patapoutian "for their discoveries of receptors for temperature and touch."
  • EM Navigator can help to find cryo-EM structure data by both pioneers.

External links:The Nobel Prize in Physiology or Medicine 2021 - NobelPrize.org / Structure data by Ardem Patapoutian / Structure data by David Julius

+
Aug 12, 2020. Covid-19 info

Covid-19 info

URL: https://pdbj.org/emnavi/covid19.php

New page: Covid-19 featured information page in EM Navigator.

Related info.:Covid-19 info / Mar 5, 2020. Novel coronavirus structure data

+
Mar 5, 2020. Novel coronavirus structure data

Novel coronavirus structure data

Related info.:Yorodumi Speices / Aug 12, 2020. Covid-19 info

External links:COVID-19 featured content - PDBj / Molecule of the Month (242)：Coronavirus Proteases

+
Jul 5, 2019. Downlodablable text data

Downlodablable text data

Some data of EM Navigator services can be downloaded as text file. Software such as Excel can load the data files.

PageDataFormat
EMN Searchsearch resultCSV, TSV, or JSON
EMN statisticsdata tableCSV or TSV

Related info.:EMN Search / EMN Statistics

-
EMN Search

3DEM data search

Advanced data search for EMDB and EM data in PDB widh various search and display options

Related info.:EMDB / PDB / EM Navigator / Q: What are the data sources of EM Navigator? / Yorodumi Search / Jul 5, 2019. Downlodablable text data

Read more