[English] 日本語
- 3DEM data search -

-
Search query


Keywords
Database /
Q: What are the data sources of EM Navigator?
Data entries / weeks ago
Q: When the data are updated?
Author
Processing method
Display mode
Sort by
Num. of entries / page
Entry
Article
Sample
Experiment
Processing
Max number of data0 for all data
File format
  • CSV format (Comma-Separated Values, for Excel, etc.)
  • TSV format (Tab Separated Values, for Excel, etc.)
  • JSON format

Yorodumi Search

-
Search result

Showing 1 - 50 of 707 items for (author: alexandra & t)

EMDB-73297:
GTPBP1*GCP*Phe-tRNA*ribosome in the GTPase activation-like state, Structure III
Method: single particle / : Susorov D, Korostelev AA

EMDB-73311:
GTPBP1*GDP*Phe-tRNA*ribosome in the post-GTP hydrolysis state, Structure IV
Method: single particle / : Susorov D, Korostelev AA

PDB-9ypg:
GTPBP1*GCP*Phe-tRNA*ribosome in the GTPase activation-like state, Structure III
Method: single particle / : Susorov D, Korostelev AA

PDB-9ypw:
GTPBP1*GDP*Phe-tRNA*ribosome in the post-GTP hydrolysis state, Structure IV
Method: single particle / : Susorov D, Korostelev AA

EMDB-73314:
Ribosome with accommodated A-site tRNA, Structure V
Method: single particle / : Susorov D, Korostelev AA

EMDB-73315:
Vacant ribosome with P-site tRNA, substate 1, Structure Ia
Method: single particle / : Susorov D, Korostelev AA

PDB-9ypy:
Ribosome with accommodated A-site tRNA, Structure V
Method: single particle / : Susorov D, Korostelev AA

PDB-9ypz:
Vacant ribosome with P-site tRNA, substate 1, Structure Ia
Method: single particle / : Susorov D, Korostelev AA

EMDB-73302:
GTPBP1*GCP*Phe-tRNA*ribosome in the open state, Structure IIa
Method: single particle / : Susorov D, Korostelev AA

EMDB-73307:
GTPBP1*GCP*Phe-tRNA*ribosome in the open state, Structure IIb
Method: single particle / : Susorov D, Korostelev AA

EMDB-73308:
GTPBP1*GCP*Phe-tRNA*ribosome in the open state, Structure IIc
Method: single particle / : Susorov D, Korostelev AA

EMDB-73310:
GTPBP1*GCP*Phe-tRNA*ribosome in the open state, Structure IId
Method: single particle / : Susorov D, Korostelev AA

EMDB-73316:
Vacant ribosome with P-site tRNA, substate 2, Structure Ib
Method: single particle / : Susorov D, Korostelev AA

EMDB-73317:
Vacant ribosome with P-site tRNA, substate 3, Structure Ic
Method: single particle / : Susorov D, Korostelev AA

PDB-9ypo:
GTPBP1*GCP*Phe-tRNA*ribosome in the open state, Structure IIa
Method: single particle / : Susorov D, Korostelev AA

PDB-9yps:
GTPBP1*GCP*Phe-tRNA*ribosome in the open state, Structure IIb
Method: single particle / : Susorov D, Korostelev AA

PDB-9ypt:
GTPBP1*GCP*Phe-tRNA*ribosome in the open state, Structure IIc
Method: single particle / : Susorov D, Korostelev AA

PDB-9ypv:
GTPBP1*GCP*Phe-tRNA*ribosome in the open state, Structure IId
Method: single particle / : Susorov D, Korostelev AA

PDB-9yq0:
Vacant ribosome with P-site tRNA, substate 2, Structure Ib
Method: single particle / : Susorov D, Korostelev AA

PDB-9yq1:
Vacant ribosome with P-site tRNA, substate 3, Structure Ic
Method: single particle / : Susorov D, Korostelev AA

EMDB-48331:
Structure of the Respiratory Syncytial Virus Fusion Protein Bound to Human Antibodies RSV_2245 and RSV_3301
Method: single particle / : Johnson NV, McLellan JS

PDB-9mkn:
Structure of the Respiratory Syncytial Virus Fusion Protein Bound to Human Antibodies RSV_2245 and RSV_3301
Method: single particle / : Johnson NV, McLellan JS

EMDB-54522:
C. elegans in situ Gap Junction class 1
Method: subtomogram averaging / : Rosenkranz N, Gottschalk A

EMDB-54525:
in situ Gap Junction C. elegans Class 2
Method: subtomogram averaging / : Rosenkranz N, Gottschalk A

EMDB-54526:
in situ C. elegans capped gap junction
Method: subtomogram averaging / : Rosenkranz N, Gottschalk A

EMDB-55045:
Capped GJ with additional cytosolic Density
Method: subtomogram averaging / : Rosenkranz N, Gottschalk A

EMDB-62397:
Strigolactone-induced ASK1-MAX2-HTL7-SMAX1 complex (Class 1) with covalently bound D-ring
Method: single particle / : Vancea AI, Huntington B, Savva CG, Arold ST

EMDB-62401:
Strigolactone-induced ASK1-MAX2-HTL7-SMAX1 complex (Class 2) with covalently bound D-ring
Method: single particle / : Vancea AI, Huntington B, Savva CG, Arold ST

EMDB-62407:
Strigolactone-induced ASK1-MAX2-HTL7-SMAX1 complex (Class 4) with covalently bound D-ring
Method: single particle / : Vancea AI, Huntington B, Savva CG, Arold ST

EMDB-62408:
Striga MAX2-ASK1 complex
Method: single particle / : Vancea AI, Huntington B, Savva CG, Arold ST

EMDB-62414:
Striga MAX2-ASK1 2:2 dimer
Method: single particle / : Vancea AI, Huntington B, Savva CG, Arold ST

EMDB-62415:
Rice D3-ASK1 complex in presence of ShHTL7 with GR24
Method: single particle / : Vancea AI, Huntington B, Savva CG, Arold ST

EMDB-62417:
Strigolactone-induced ASK1-MAX2-HTL7-SMAX1 complex (Class 3) with covalently bound D-ring
Method: single particle / : Vancea AI, Huntington B, Savva CG, Arold ST

PDB-9kkx:
Strigolactone-induced ASK1-MAX2-HTL7-SMAX1 complex (Class 1) with covalently bound D-ring
Method: single particle / : Vancea AI, Huntington B, Savva CG, Arold ST

PDB-9kld:
Strigolactone-induced ASK1-MAX2-HTL7-SMAX1 complex (Class 2) with covalently bound D-ring
Method: single particle / : Vancea AI, Huntington B, Savva CG, Arold ST

PDB-9klk:
Strigolactone-induced ASK1-MAX2-HTL7-SMAX1 complex (Class 4) with covalently bound D-ring
Method: single particle / : Vancea AI, Huntington B, Savva CG, Arold ST

PDB-9kll:
Striga MAX2-ASK1 complex
Method: single particle / : Vancea AI, Huntington B, Savva CG, Arold ST

PDB-9klv:
Strigolactone-induced ASK1-MAX2-HTL7-SMAX1 complex (Class 3) with covalently bound D-ring
Method: single particle / : Vancea AI, Huntington B, Savva CG, Arold ST

EMDB-52488:
Cryo-EM map of human UBR4/KCMF1/CALM1 in complex with UBE2A
Method: single particle / : Grabarczyk DB, Clausen T

EMDB-52491:
Cryo-EM structure of UBR4/KCMF1/CALM1 (consensus map)
Method: single particle / : Grabarczyk DB, Clausen T

EMDB-52494:
Cryo-EM structure of the human UBR4/KCMF1/CALM1 complex (UBR/BS1/ZZ-DZB focused refinement)
Method: single particle / : Grabarczyk DB, Clausen T

EMDB-52504:
Cryo-EM structure of the C. elegans UBR4/KCMF1 complex (consensus map)
Method: single particle / : Grabarczyk DB, Clausen T

EMDB-52513:
Cryo-EM structure of the C. elegans UBR4/KCMF1 complex (BS1/UBR/ZZ-DZB focused refinement)
Method: single particle / : Grabarczyk DB, Clausen T

EMDB-52516:
Cryo-EM structure of the C. elegans UBR4/KCMF1 complex (C-term focused refinement)
Method: single particle / : Grabarczyk DB, Clausen T

EMDB-53425:
Cryo-EM structure of the human UBR4 complex (ZZ-DZB deletion variant)
Method: single particle / : Grabarczyk DB, Clausen T

EMDB-52956:
Structure of Cystathionine gamma-lyase with ZHAWOC24000
Method: single particle / : Uchikawa E, Nazi S, So A, Driss E

EMDB-52957:
Structure of Cystathionine gamma-lyase
Method: single particle / : Uchikawa E, Nasi S, So A, Driss A

EMDB-53348:
Cryo-EM structure of the core of the Arabidopsis thaliana UBR4/DI19/CALM1 complex
Method: single particle / : Grabarczyk DB, Clausen T

EMDB-53426:
Cryo-EM structure of the human UBR4/KCMF1/CALM1 complex (C-term dimer interface focused refinement)
Method: single particle / : Grabarczyk DB, Clausen T

EMDB-53428:
Cryo-EM structure of the human UBR4/KCMF1/CALM1 complex (CALM1 focused refinement)
Method: single particle / : Grabarczyk DB, Clausen T

Pages:

+
About EMN search

-
News

-
Feb 9, 2022. New format data for meta-information of EMDB entries

New format data for meta-information of EMDB entries

  • Version 3 of the EMDB header file is now the official format.
  • The previous official version 1.9 will be removed from the archive.

Related info.:EMDB header

External links:wwPDB to switch to version 3 of the EMDB data model

-
Oct 5, 2021. Nobel Prize for mechanically activated and temperature-gated ion channels

Nobel Prize for mechanically activated and temperature-gated ion channels

  • The Nobel Prize in Physiology or Medicine 2021 was awarded jointly to David Julius and Ardem Patapoutian "for their discoveries of receptors for temperature and touch."
  • EM Navigator can help to find cryo-EM structure data by both pioneers.

External links:The Nobel Prize in Physiology or Medicine 2021 - NobelPrize.org / Structure data by Ardem Patapoutian / Structure data by David Julius

+
Aug 12, 2020. Covid-19 info

Covid-19 info

URL: https://pdbjlvh1.pdbj.org/emnavi/covid19.php

New page: Covid-19 featured information page in EM Navigator.

Related info.:Covid-19 info / Mar 5, 2020. Novel coronavirus structure data

+
Mar 5, 2020. Novel coronavirus structure data

Novel coronavirus structure data

Related info.:Yorodumi Speices / Aug 12, 2020. Covid-19 info

External links:COVID-19 featured content - PDBj / Molecule of the Month (242)：Coronavirus Proteases

+
Jul 5, 2019. Downlodablable text data

Downlodablable text data

Some data of EM Navigator services can be downloaded as text file. Software such as Excel can load the data files.

PageDataFormat
EMN Searchsearch resultCSV, TSV, or JSON
EMN statisticsdata tableCSV or TSV

Related info.:EMN Search / EMN Statistics

-
EMN Search

3DEM data search

Advanced data search for EMDB and EM data in PDB widh various search and display options

Related info.:EMDB / PDB / EM Navigator / Q: What are the data sources of EM Navigator? / Yorodumi Search / Jul 5, 2019. Downlodablable text data

Read more