[English] 日本語
EMN search
- 3DEM data search -

-
Search query


Keywords
Database /
Q: What are the data sources of EM Navigator?
Data entries / weeks ago
Q: When the data are updated?
Author
Processing method
Display mode
Sort by
Num. of entries / page
Entry
Article
Sample
Experiment
Processing
Max number of data0 for all data
File format
  • CSV format (Comma-Separated Values, for Excel, etc.)
  • TSV format (Tab Separated Values, for Excel, etc.)
  • JSON format

Yorodumi Search

-
Search result

Showing 1 - 50 of 920 items for (author: smith & t)

EMDB-19066:
TREK2 in OGNG/CHS detergent micelle with biparatopic inhibitory nanobody Nb6158
Method: single particle / : Smith KHM, Tucker SJ

EMDB-40786:
Structural basis and functional roles for Toll-like receptor binding to Latrophilin adhesion-GPCR in embryo development
Method: single particle / : Li J, Rosas GC, Arac D, Ozkan E

EMDB-40825:
10E8-GT10.2 immunogen in complex with human Fab 10E8 and mouse Fab W6-10
Method: single particle / : Huang J, Ozorowski G, Ward AB

PDB-8sx3:
10E8-GT10.2 immunogen in complex with human Fab 10E8 and mouse Fab W6-10
Method: single particle / : Huang J, Ozorowski G, Ward AB

EMDB-17296:
Stabilised BA.1 SARS-CoV-2 spike with H6 nanobodies in '2 up 1 down' RBD conformation
Method: single particle / : Weckener M, Naismith JH, Owens RJ

PDB-8oyu:
Stabilised BA.1 SARS-CoV-2 spike with H6 nanobodies in '2 up 1 down' RBD conformation
Method: single particle / : Weckener M, Naismith JH, Owens RJ

EMDB-41024:
MD65 N332-GT5 SOSIP in complex with RM_N332_03 Fab and RM20A3 Fab
Method: single particle / : Ozorowski G, Torres JL, Ward AB

EMDB-41025:
MD65 N332-GT5 SOSIP in complex with RM_N332_36 Fab and RM20A3 Fab
Method: single particle / : Ozorowski G, Torres JL, Ward AB

EMDB-41026:
MD65 N332-GT5 SOSIP in complex with RM_N332_32 Fab and RM20A3
Method: single particle / : Ozorowski G, Torres JL, Ward AB

EMDB-41027:
MD65 N332-GT5 SOSIP in complex with RM_N332_08 Fab and RM20A3 Fab
Method: single particle / : Ozorowski G, Torres JL, Ward AB

EMDB-41034:
MD64 N332-GT5 SOSIP
Method: single particle / : Ozorowski G, Torres JL, Ward AB

EMDB-41035:
MD65 N332-GT5 SOSIP in complex with RM_N332_07 Fab and RM20A3 Fab
Method: single particle / : Ozorowski G, Torres JL, Ward AB

PDB-8t49:
MD65 N332-GT5 SOSIP in complex with RM_N332_03 Fab and RM20A3 Fab
Method: single particle / : Ozorowski G, Torres JL, Ward AB

PDB-8t4a:
MD65 N332-GT5 SOSIP in complex with RM_N332_36 Fab and RM20A3 Fab
Method: single particle / : Ozorowski G, Torres JL, Ward AB

PDB-8t4b:
MD65 N332-GT5 SOSIP in complex with RM_N332_32 Fab and RM20A3
Method: single particle / : Ozorowski G, Torres JL, Ward AB

PDB-8t4d:
MD65 N332-GT5 SOSIP in complex with RM_N332_08 Fab and RM20A3 Fab
Method: single particle / : Ozorowski G, Torres JL, Ward AB

PDB-8t4k:
MD64 N332-GT5 SOSIP
Method: single particle / : Ozorowski G, Torres JL, Ward AB

PDB-8t4l:
MD65 N332-GT5 SOSIP in complex with RM_N332_07 Fab and RM20A3 Fab
Method: single particle / : Ozorowski G, Torres JL, Ward AB

EMDB-39712:
1.4A Tobacco Mosaic Virus (CryoSPARC processing from Falcon 4 data)
Method: helical / : Burton-Smith RN, Murata K

EMDB-42977:
Cryo-EM structure of singly-bound SNF2h-nucleosome complex with SNF2h at inactive SHL2 (conformation 1)
Method: single particle / : Chio US, Palovcak E, Armache JP, Narlikar GJ, Cheng Y

EMDB-43000:
Cryo-EM structure of SNF2h-nucleosome complex (consensus structure)
Method: single particle / : Chio US, Palovcak E, Armache JP, Narlikar GJ, Cheng Y

EMDB-43001:
Cryo-EM structure of SNF2h-nucleosome complex (single-bound structure)
Method: single particle / : Chio US, Palovcak E, Armache JP, Narlikar GJ, Cheng Y

EMDB-43002:
Cryo-EM structure of doubly-bound SNF2h-nucleosome complex
Method: single particle / : Chio US, Palovcak E, Armache JP, Narlikar GJ, Cheng Y

EMDB-43003:
Cryo-EM structure of singly-bound SNF2h-nucleosome complex with SNF2h at inactive SHL2 (conformation 2)
Method: single particle / : Chio US, Palovcak E, Armache JP, Narlikar GJ, Cheng Y

EMDB-43004:
Cryo-EM structure of doubly-bound SNF2h-nucleosome complex (conformation 1)
Method: single particle / : Chio US, Palovcak E, Armache JP, Narlikar GJ, Cheng Y

EMDB-43005:
Cryo-EM structure of doubly-bound SNF2h-nucleosome complex (conformation 2)
Method: single particle / : Chio US, Palovcak E, Armache JP, Narlikar GJ, Cheng Y

PDB-8v4y:
Cryo-EM structure of singly-bound SNF2h-nucleosome complex with SNF2h at inactive SHL2 (conformation 1)
Method: single particle / : Chio US, Palovcak E, Armache JP, Narlikar GJ, Cheng Y

PDB-8v6v:
Cryo-EM structure of doubly-bound SNF2h-nucleosome complex
Method: single particle / : Chio US, Palovcak E, Armache JP, Narlikar GJ, Cheng Y

PDB-8v7l:
Cryo-EM structure of singly-bound SNF2h-nucleosome complex with SNF2h at inactive SHL2 (conformation 2)
Method: single particle / : Chio US, Palovcak E, Armache JP, Narlikar GJ, Cheng Y

EMDB-41933:
CryoEM map of horse spleen apoferritin determined as a reference for benchmarking square and rectangular apertures for cryo-EM
Method: single particle / : Brown HG, Hanssen E

EMDB-41936:
CryoEM map of horse spleen apoferritin determined as a reference for benchmarking square and rectangular apertures for cryo-EM (Falcon IV round beam)
Method: single particle / : Brown HG, Hanssen E

EMDB-41937:
CryoEM map of horse spleen apoferritin determined for benchmarking square and rectangular apertures for cryo-EM (Falcon IV square beam)
Method: single particle / : Brown HG, Hanssen E

EMDB-41938:
CryoEM map of horse spleen apoferritin determined for benchmarking square and rectangular apertures for cryo-EM (Gatan K3 rectangular beam)
Method: single particle / : Brown HG, Hanssen E

EMDB-42882:
Amylin 1 receptor bound to salmon calcitonin (Amy1R:sCT) reconstructed from cryo-EM datasets recorded using a rectangular aperture
Method: single particle / : Brown HG, Hanssen E

EMDB-19024:
Structure of the PNMA2 capsid
Method: single particle / : Erlendsson S, Xu J, Shepherd JD, Briggs JAG

EMDB-19025:
Structure of the five-fold capsomer of the PNMA2 capsid
Method: single particle / : Erlendsson S, Xu J, Shepherd JD, Briggs JAG

EMDB-19026:
Structure of the three-fold capsomer of the PNMA2 capsid
Method: single particle / : Erlendsson S, Xu J, Shepherd JD, Briggs JAG

EMDB-19027:
Structure of the two-fold capsomer of the PNMA2 capsid
Method: single particle / : Erlendsson S, Xu J, Shepherd JD, Briggs JAG

PDB-8rb3:
Structure of the PNMA2 capsid
Method: single particle / : Erlendsson S, Xu J, Shepherd JD, Briggs JAG

PDB-8rb4:
Structure of the five-fold capsomer of the PNMA2 capsid
Method: single particle / : Erlendsson S, Xu J, Shepherd JD, Briggs JAG

PDB-8rb5:
Structure of the three-fold capsomer of the PNMA2 capsid
Method: single particle / : Erlendsson S, Xu J, Shepherd JD, Briggs JAG

PDB-8rb7:
Structure of the two-fold capsomer of the PNMA2 capsid
Method: single particle / : Erlendsson S, Xu J, Shepherd JD, Briggs JAG

EMDB-19194:
In situ cryo-electron tomogram of an autophagosome in the projection of an iPSC-derived neuron #2
Method: electron tomography / : Hoyer MJ, Capitanio C, Smith IR, Paoli JC, Bieber A, Jiang Y, Paulo JA, Gonzalez-Lozano MA, Baumeister W, Wilfling F, Schulman BA, Harper WJ

EMDB-19346:
In situ cryo-electron tomogram of an autophagosome in the projection of an iPSC-derived neuron #1
Method: electron tomography / : Hoyer MJ, Capitanio C, Smith IR, Paoli JC, Bieber A, Jiang Y, Paulo JA, Gonzalez-Lozano MA, Baumeister W, Wilfling F, Schulman BA, Harper WJ

EMDB-42600:
Murine norovirus in the presence of 1mM calcium
Method: single particle / : Smith TJ

EMDB-42604:
Murine norovirus + 1 mM MgCl2
Method: single particle / : Smith TJ

EMDB-42623:
Murine norovirus dialyzed against EDTA
Method: single particle / : Smith TJ

PDB-8uux:
Murine norovirus capsid protein in the presence of 1mM calcium
Method: single particle / : Smith TJ

PDB-8uv3:
Murine norovirus capsid protein + 1 mM MgCl2
Method: single particle / : Smith TJ

EMDB-37179:
Post-processed counting mode Adeno-associated virus (AAV) (RELION)
Method: single particle / : Burton-Smith RN, Murata K

Pages:

+
About EMN search

-
News

-
Feb 9, 2022. New format data for meta-information of EMDB entries

New format data for meta-information of EMDB entries

  • Version 3 of the EMDB header file is now the official format.
  • The previous official version 1.9 will be removed from the archive.

Related info.:EMDB header

External links:wwPDB to switch to version 3 of the EMDB data model

-
Oct 5, 2021. Nobel Prize for mechanically activated and temperature-gated ion channels

Nobel Prize for mechanically activated and temperature-gated ion channels

  • The Nobel Prize in Physiology or Medicine 2021 was awarded jointly to David Julius and Ardem Patapoutian "for their discoveries of receptors for temperature and touch."
  • EM Navigator can help to find cryo-EM structure data by both pioneers.

External links:The Nobel Prize in Physiology or Medicine 2021 - NobelPrize.org / Structure data by Ardem Patapoutian / Structure data by David Julius

+
Aug 12, 2020. Covid-19 info

Covid-19 info

URL: https://pdbj.org/emnavi/covid19.php

New page: Covid-19 featured information page in EM Navigator.

Related info.:Covid-19 info / Mar 5, 2020. Novel coronavirus structure data

+
Mar 5, 2020. Novel coronavirus structure data

Novel coronavirus structure data

Related info.:Yorodumi Speices / Aug 12, 2020. Covid-19 info

External links:COVID-19 featured content - PDBj / Molecule of the Month (242):Coronavirus Proteases

+
Jul 5, 2019. Downlodablable text data

Downlodablable text data

Some data of EM Navigator services can be downloaded as text file. Software such as Excel can load the data files.

PageDataFormat
EMN Searchsearch resultCSV, TSV, or JSON
EMN statisticsdata tableCSV or TSV

Related info.:EMN Search / EMN Statistics

-
EMN Search

3DEM data search

Advanced data search for EMDB and EM data in PDB widh various search and display options

Related info.:EMDB / PDB / EM Navigator / Q: What are the data sources of EM Navigator? / Yorodumi Search / Jul 5, 2019. Downlodablable text data

Read more