[English] 日本語
EMN search
- 3DEM data search -

-
Search query


Keywords
Database /
Q: What are the data sources of EM Navigator?
Data entries / weeks ago
Q: When the data are updated?
Author
Processing method
Display mode
Sort by
Num. of entries / page
Entry
Article
Sample
Experiment
Processing
Max number of data0 for all data
File format
  • CSV format (Comma-Separated Values, for Excel, etc.)
  • TSV format (Tab Separated Values, for Excel, etc.)
  • JSON format

Yorodumi Search

-
Search result

Showing 1 - 50 of 95 items for (author: kim & jh)

EMDB-41888:
Structure of Apo CXCR4/Gi complex
Method: single particle / : Saotome K, McGoldrick LL, Franklin MC

EMDB-41889:
Structure of CXCL12-bound CXCR4/Gi complex
Method: single particle / : Saotome K, McGoldrick LL, Franklin MC

EMDB-41890:
Structure of AMD3100-bound CXCR4/Gi complex
Method: single particle / : Saotome K, McGoldrick LL, Franklin MC

EMDB-41891:
Structure of REGN7663 Fab-bound CXCR4/Gi complex
Method: single particle / : Saotome K, McGoldrick LL, Franklin MC

EMDB-41892:
Structure of REGN7663-Fab bound CXCR4
Method: single particle / : Saotome K, McGoldrick LL, Franklin MC

EMDB-41893:
Structure of trimeric CXCR4 in complex with REGN7663 Fab
Method: single particle / : Saotome K, McGoldrick LL, Franklin MC

EMDB-41894:
Structure of tetrameric CXCR4 in complex with REGN7663 Fab
Method: single particle / : Saotome K, McGoldrick LL, Franklin MC

EMDB-35377:
Cryo-EM structure of GPR156 of GPR156-miniGo-scFv16 complex (local refine)
Method: single particle / : Shin J, Park J, Cho Y

EMDB-35378:
Cryo-EM structure of miniGo-scFv16 of GPR156-miniGo-scFv16 complex (local refine)
Method: single particle / : Shin J, Park J, Cho Y

EMDB-35380:
Cryo-EM structure of GPR156-miniGo-scFv16 complex
Method: single particle / : Shin J, Park J, Cho Y

EMDB-35382:
Cryo-EM structure of GPR156A/B of G-protein free GPR156 (local refine)
Method: single particle / : Shin J, Park J, Cho Y

EMDB-35389:
Cryo-EM structure of GPR156C/D of G-protein free GPR156 (local refine)
Method: single particle / : Shin J, Park J, Cho Y

EMDB-35390:
Cryo-EM structure of G-protein free GPR156
Method: single particle / : Shin J, Park J, Cho Y

EMDB-35234:
Cryo-EM structure of Acipimox bound human hydroxy-carboxylic acid receptor 2 in complex with Gi heterotrimer
Method: single particle / : Park JH, Ishimoto N, Park SY

EMDB-35235:
Cryo-EM structure of GSK256073 bound human hydroxy-carboxylic acid receptor 2 in complex with Gi heterotrimer
Method: single particle / : Park JH, Ishimoto N, Park SY

EMDB-34155:
Designed pH-responsive P22 VLP
Method: single particle / : Kim KJ, Kim G, Bae JH, Song JJ, Kim HS

EMDB-34022:
Cryo-EM structure of human topoisomerase II beta in complex with DNA and etoposide
Method: single particle / : Naganuma M, Ehara H, Kim D, Nakagawa R, Cong A, Bu H, Jeong J, Jang J, Schellenberg MJ, Bunch H, Sekine S

EMDB-36900:
Cryo-EM structure of niacin bound human hydroxy-carboxylic acid receptor 2 (Local refinement)
Method: single particle / : Park JH, Ishimoto N, Park SY

EMDB-36901:
Cryo-EM structure of Acipimox bound human hydroxy-carboxylic acid receptor 2 (Local refinement)
Method: single particle / : Park JH, Ishimoto N, Park SY

EMDB-36902:
Cryo-EM structure of GSK256073 bound human hydroxy-carboxylic acid receptor 2 (Local refinement)
Method: single particle / : Park JH, Ishimoto N, Park SY

EMDB-40088:
HIV-1 Env subtype C CZA97.12 SOSIP.664 in complex with 3BNC117 Fab
Method: single particle / : Ozorowski G, Lee JH, Ward AB

EMDB-34437:
Cryo-EM structure of niacin bound human hydroxy-carboxylic acid receptor 2 in complex with Gi heterotrimer
Method: single particle / : Park JH, Ishimoto N, Park SY

EMDB-33734:
Cryo-EM structure of SARS-CoV-2 spike in complex with K202.B bispecific antibody
Method: single particle / : Yoo Y, Cho HS

EMDB-33569:
Higher-ordered assembly of mouse TRIM72 WT on the Phosphatidylserine/Cholesterol liposome bilayer
Method: subtomogram averaging / : Park SH, Hyun J, Jeong H, Song HK

EMDB-33582:
Higher-ordered assembly of mouse TRIM72 M138R on the Phosphatidylserine/Cholesterol liposome bilayer
Method: subtomogram averaging / : Park SH, Hyun J, Jeong H, Song HK

EMDB-28650:
Human S1P transporter Spns2 in an inward-facing open conformation (state 1)
Method: single particle / : Ahmed S, Zhao H, Dai Y, Lee CH

EMDB-28651:
Human S1P transporter Spns2 in an outward-facing open conformation (state 4)
Method: single particle / : Ahmed S, Zhao H, Dai Y, Lee CH

EMDB-28652:
Human S1P transporter Spns2 in an inward-facing open conformation (state 1*)
Method: single particle / : Ahmed S, Zhao H, Dai Y, Lee CH

EMDB-28653:
Human S1P transporter Spns2 in an outward-facing partially occluded conformation (state 3)
Method: single particle / : Ahmed S, Zhao H, Dai Y, Lee CH

EMDB-28654:
Human S1P transporter Spns2 in an outward-facing partially occluded conformation (state 2)
Method: single particle / : Ahmed S, Zhao H, Dai Y, Lee CH

EMDB-29860:
Structure of inhibitor 16d-bound SPNS2
Method: single particle / : Chen H, Li X

EMDB-28523:
Structure of interleukin receptor common gamma chain (IL2Rgamma) in complex with two antibodies
Method: single particle / : Franklin MC, Romero Hernandez A

EMDB-25022:
Cytoplasmic tail deleted HIV Env trimer in nanodisc
Method: single particle / : Yang S, Walz T

EMDB-25024:
Cryo-EM map for HIV-1 Env bound with one 4E10 Fab
Method: single particle / : Yang S, Walz T

EMDB-25025:
Cryo-EM map for HIV-1 Env bound with two 4E10 Fabs
Method: single particle / : Yang S, Walz T

EMDB-25045:
Cytoplasmic tail deleted HIV-1 Env bound with three 4E10 Fabs
Method: single particle / : Yang S, Walz T

EMDB-31152:
Reconstituted proteoliposomes of TRIM72 in positive curvature #2
Method: electron tomography / : Park SH, Song HK

EMDB-27610:
BG505 MD39 SOSIP in complex with Rh.NJ82 wk13 N611 and base epitope pAbs
Method: single particle / : Torres JL, Lee WH, Ozorowski G, Ward AB

EMDB-27611:
BG505 MD39 SOSIP in complex with Rh.NJ95 wk13 base epitope pAb
Method: single particle / : Torres JL, Lee WH, Ozorowski G, Ward AB

EMDB-27612:
BG505 MD39 SOSIP in complex with Rh.NK05 wk13 base epitope pAb
Method: single particle / : Torres JL, Lee WH, Ozorowski G, Ward AB

EMDB-27614:
BG505 MD39 SOSIP in complex with Rh.NJ79 wk13 base epitope pAb
Method: single particle / : Torres JL, Lee WH, Ozorowski G, Ward AB

EMDB-27615:
BG505 MD39 SOSIP in complex with Rh.NJ93 wk13 base and V5/C3 epitope pAbs
Method: single particle / : Torres JL, Lee WH, Ozorowski G, Ward AB

EMDB-31139:
Reconstituted proteoliposomes of TRIM72 in negative curvature #1
Method: electron tomography / : Park SH, Song HK

EMDB-31150:
Reconstituted proteoliposomes of TRIM72 in negative curvature #2
Method: electron tomography / : Park SH, Song HK

EMDB-31151:
Reconstituted proteoliposomes of TRIM72 in positive curvature #1
Method: electron tomography / : Park SH, Song HK

EMDB-27601:
BG505 MD39 SOSIP in complex with Rh.K409 wk13 base, FP/gp41, V5/C3 and N611 epitope pAbs
Method: single particle / : Sewall LM, Richey ST, Ozorowski G, Ward AB

EMDB-27602:
BG505 MD39 SOSIP in complex with Rh.K487 wk13 base, FP/gp41, and V5/C3 epitope pAbs
Method: single particle / : Sewall LM, Richey ST, Ozorowski G, Ward AB

EMDB-27603:
BG505 MD39 SOSIP in complex with Rh.DGT5 wk13 base, N335/N289, V1/V3 and V5/C3 epitope pAbs
Method: single particle / : Sewall LM, Richey ST, Ozorowski G, Ward AB

EMDB-27604:
BG505 MD39 SOSIP in complex with Rh.K949 wk33 base, N335/N289, V1/V3, N611 and V5/C3 epitope pAbs
Method: single particle / : Sewall LM, Richey ST, Ozorowski G, Ward AB

EMDB-27605:
BG505 MD39 SOSIP in complex with Rh.L282 wk33 base, N335/N289, FP/gp41 and V5/C3 epitope pAbs
Method: single particle / : Sewall LM, Richey ST, Ozorowski G, Ward AB

Pages:

+
About EMN search

-
News

-
Feb 9, 2022. New format data for meta-information of EMDB entries

New format data for meta-information of EMDB entries

  • Version 3 of the EMDB header file is now the official format.
  • The previous official version 1.9 will be removed from the archive.

Related info.:EMDB header

External links:wwPDB to switch to version 3 of the EMDB data model

-
Oct 5, 2021. Nobel Prize for mechanically activated and temperature-gated ion channels

Nobel Prize for mechanically activated and temperature-gated ion channels

  • The Nobel Prize in Physiology or Medicine 2021 was awarded jointly to David Julius and Ardem Patapoutian "for their discoveries of receptors for temperature and touch."
  • EM Navigator can help to find cryo-EM structure data by both pioneers.

External links:The Nobel Prize in Physiology or Medicine 2021 - NobelPrize.org / Structure data by Ardem Patapoutian / Structure data by David Julius

+
Aug 12, 2020. Covid-19 info

Covid-19 info

URL: https://pdbj.org/emnavi/covid19.php

New page: Covid-19 featured information page in EM Navigator.

Related info.:Covid-19 info / Mar 5, 2020. Novel coronavirus structure data

+
Mar 5, 2020. Novel coronavirus structure data

Novel coronavirus structure data

Related info.:Yorodumi Speices / Aug 12, 2020. Covid-19 info

External links:COVID-19 featured content - PDBj / Molecule of the Month (242):Coronavirus Proteases

+
Jul 5, 2019. Downlodablable text data

Downlodablable text data

Some data of EM Navigator services can be downloaded as text file. Software such as Excel can load the data files.

PageDataFormat
EMN Searchsearch resultCSV, TSV, or JSON
EMN statisticsdata tableCSV or TSV

Related info.:EMN Search / EMN Statistics

-
EMN Search

3DEM data search

Advanced data search for EMDB and EM data in PDB widh various search and display options

Related info.:EMDB / PDB / EM Navigator / Q: What are the data sources of EM Navigator? / Yorodumi Search / Jul 5, 2019. Downlodablable text data

Read more