Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help

4U3

Summary
Name:5-chloro-2'-deoxycytidine 5'-(dihydrogen phosphate)
Synonyms:5-Chloro-5'-deoxycytidine
Formula:C9 H13 Cl N3 O7 P
Formal charge:0
Formula weight:341.642 Da
Component type:DNA linking

Chemical Identifiers

ProgramVersionName
ACDLabs12.015-chloro-2'-deoxycytidine 5'-(dihydrogen phosphate)
OpenEye OEToolkits1.9.2[(2R,3S,5R)-5-(4-azanyl-5-chloranyl-2-oxidanylidene-pyrimidin-1-yl)-3-oxidanyl-oxolan-2-yl]methyl dihydrogen phosphate

Chemical Descriptors

TypeProgramVersionDescriptor
SMILESACDLabs12.01C1(N=C(N)C(Cl)=CN1C2OC(COP(=O)(O)O)C(O)C2)=O
InChIInChI1.03InChI=1S/C9H13ClN3O7P/c10-4-2-13(9(15)12-8(4)11)7-1-5(14)6(20-7)3-19-21(16,17)18/h2,5-7,14H,1,3H2,(H2,11,12,15)(H2,16,17,18)/t5-,6+,7+/m0/s1
InChIKeyInChI1.03JXVVNBLPBHXIAA-RRKCRQDMSA-N
SMILES_CANONICALCACTVS3.385NC1=NC(=O)N(C=C1Cl)[C@H]2C[C@H](O)[C@@H](CO[P](O)(O)=O)O2
SMILESCACTVS3.385NC1=NC(=O)N(C=C1Cl)[CH]2C[CH](O)[CH](CO[P](O)(O)=O)O2
SMILES_CANONICALOpenEye OEToolkits1.9.2C1[C@@H]([C@H](O[C@H]1N2C=C(C(=NC2=O)N)Cl)COP(=O)(O)O)O
SMILESOpenEye OEToolkits1.9.2C1C(C(OC1N2C=C(C(=NC2=O)N)Cl)COP(=O)(O)O)O

222624

PDB entries from 2024-07-17

PDB statisticsPDBj update infoContact PDBjnumon