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5D6H
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CRYSTAL STRUCTURE OF CSUC-CSUA/B CHAPERONE-MAJOR SUBUNIT PRE-ASSEMBLY COMPLEX FROM CSU BIOFILM-MEDIATING PILI OF ACINETOBACTER BAUMANNII
分子名称:CsuC, CsuA/B
著者Pakharukova, N.A., Tuitilla, M., Paavilainen, S., Zavialov, A.
登録日2015-08-12
公開日2015-11-04
最終更新日2015-12-02
実験手法X-RAY DIFFRACTION (2.4 Å)
主引用文献Structural Insight into Archaic and Alternative Chaperone-Usher Pathways Reveals a Novel Mechanism of Pilus Biogenesis.
Plos Pathog., 11, 2015
1PN6
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DOMAIN-WISE FITTING OF THE CRYSTAL STRUCTURE OF T.THERMOPHILUS EF-G INTO THE LOW RESOLUTION MAP OF THE RELEASE COMPLEX.PUROMYCIN.EFG.GDPNP OF E.COLI 70S RIBOSOME.
分子名称:Elongation factor G
著者Valle, M., Zavialov, A., Sengupta, J., Rawat, U., Ehrenberg, M., Frank, J.
登録日2003-06-12
公開日2003-07-15
最終更新日2011-07-13
実験手法ELECTRON MICROSCOPY (10.8 Å)
主引用文献Locking and Unlocking of Ribosomal Motions
Cell(Cambridge,Mass.), 114, 2003
1PN7
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COORDINATES OF S12, L11 PROTEINS AND P-TRNA, FROM THE 70S X-RAY STRUCTURE ALIGNED TO THE 70S CRYO-EM MAP OF E.COLI RIBOSOME
分子名称:P-tRNA, 30S ribosomal protein S12, 50S ribosomal protein L11
著者Valle, M., Zavialov, A., Sengupta, J., Rawat, U., Ehrenberg, M., Frank, J.
登録日2003-06-12
公開日2003-07-15
最終更新日2011-07-13
実験手法ELECTRON MICROSCOPY (10.8 Å)
主引用文献Locking and Unlocking of Ribosomal Motions
Cell(Cambridge,Mass.), 114, 2003
1PN8
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COORDINATES OF S12, L11 PROTEINS AND E-SITE TRNA FROM 70S CRYSTAL STRUCTURE SEPARATELY FITTED INTO THE CRYO-EM MAP OF E.COLI 70S.EF-G.GDPNP COMPLEX. THE ATOMIC COORDINATES ORIGINALLY FROM THE E-SITE TRNA WERE FITTED IN THE POSITION OF THE HYBRID P/E-SITE TRNA.
分子名称:E-tRNA, 30S ribosomal protein S12, 50S ribosomal protein L11
著者Valle, M., Zavialov, A., Sengupta, J., Rawat, U., Ehrenberg, M., Frank, J.
登録日2003-06-12
公開日2003-07-15
最終更新日2011-07-13
実験手法ELECTRON MICROSCOPY (10.8 Å)
主引用文献Locking and Unlocking of Ribosomal Motions
Cell(Cambridge,Mass.), 114, 2003
1QZA
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COORDINATES OF THE A/T SITE TRNA MODEL FITTED INTO THE CRYO-EM MAP OF EF-TU TERNARY COMPLEX (GDP.KIRROMYCIN) BOUND 70S RIBOSOME
分子名称:Phe-tRNA
著者Valle, M., Zavialov, A., Li, W., Stagg, S.M., Sengupta, J., Nielsen, R.C., Nissen, P., Harvey, S.C., Ehrenberg, M., Frank, J.
登録日2003-09-16
公開日2003-11-04
最終更新日2011-07-13
実験手法ELECTRON MICROSCOPY (10 Å)
主引用文献Incorporation of Aminoacyl-tRNA into the Ribosome as seen by Cryo-electron Microscopy
Nat.Struct.Biol., 10, 2003
1QZB
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COORDINATES OF THE A-SITE TRNA MODEL FITTED INTO THE CRYO-EM MAP OF 70S RIBOSOME IN THE PRE-TRANSLOCATIONAL STATE
分子名称:Phe-tRNA
著者Valle, M., Zavialov, A., Li, W., Stagg, S.M., Sengupta, J., Nielsen, R.C., Nissen, P., Harvey, S.C., Ehrenberg, M., Frank, J.
登録日2003-09-16
公開日2003-11-04
最終更新日2011-07-13
実験手法ELECTRON MICROSCOPY (9 Å)
主引用文献Incorporation of Aminoacyl-tRNA into the Ribosome as seen by Cryo-electron Microscopy
Nat.Struct.Biol., 10, 2003
1QZC
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COORDINATES OF S12, SH44, LH69 AND SRL SEPARATELY FITTED INTO THE CRYO-EM MAP OF EF-TU TERNARY COMPLEX (GDP.KIRROMYCIN) BOUND 70S RIBOSOME
分子名称:16S rRNA, 23S rRNA, 30S ribosomal protein S12
著者Valle, M., Zavialov, A., Li, W., Stagg, S.M., Sengupta, J., Nielsen, R.C., Nissen, P., Harvey, S.C., Ehrenberg, M., Frank, J.
登録日2003-09-16
公開日2003-11-04
最終更新日2018-07-18
実験手法ELECTRON MICROSCOPY (9 Å)
主引用文献Incorporation of Aminoacyl-tRNA into the Ribosome as seen by Cryo-electron Microscopy
Nat.Struct.Biol., 10, 2003
1QZD
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EF-TU.KIRROMYCIN COORDINATES FITTED INTO THE CRYO-EM MAP OF EF-TU TERNARY COMPLEX (GDP.KIRROMYCIN) BOUND 70S RIBOSOME
分子名称:Elongation factor Tu
著者Valle, M., Zavialov, A., Li, W., Stagg, S.M., Sengupta, J., Nielsen, R.C., Nissen, P., Harvey, S.C., Ehrenberg, M., Frank, J.
登録日2003-09-16
公開日2003-11-04
最終更新日2018-07-18
実験手法ELECTRON MICROSCOPY (10 Å)
主引用文献Incorporation of Aminoacyl-tRNA into the Ribosome as seen by Cryo-electron Microscopy
Nat.Struct.Biol., 10, 2003
1R2W
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COORDINATES OF L11 WITH 58NTS OF 23S RRNA FITTED INTO THE CRYO-EM MAP OF THE 70S RIBOSOME
分子名称:58nts of 23S rRNA, 50S ribosomal protein L11
著者Valle, M., Zavialov, A., Li, W., Stagg, S.M., Sengupta, J., Nielsen, R.C., Nissen, P., Harvey, S.C., Ehrenberg, M., Frank, J.
登録日2003-09-30
公開日2003-11-04
最終更新日2011-07-13
実験手法ELECTRON MICROSCOPY (9 Å)
主引用文献Incorporation of aminoacyl-tRNA into the ribosome as seen by cryo-electron Microscopy
Nat.Struct.Biol., 10, 2003
1R2X
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COORDINATES OF L11 WITH 58NTS OF 23S RRNA FITTED INTO THE CRYO-EM MAP OF EF-TU TERNARY COMPLEX (GDP.KIRROMYCIN) BOUND 70S RIBOSOME
分子名称:58nts of 23S rRNA, 50S ribosomal protein L11
著者Valle, M., Zavialov, A., Li, W., Stagg, S.M., Sengupta, J., Nielsen, R.C., Nissen, P., Harvey, S.C., Ehrenberg, M., Frank, J.
登録日2003-09-30
公開日2003-11-04
最終更新日2013-12-04
実験手法ELECTRON MICROSCOPY (9 Å)
主引用文献Incorporation of aminoacyl-tRNA into the ribosome as seen by cryo-electron Microscopy
Nat.Struct.Biol., 10, 2003
1TR7
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FIMH ADHESIN RECEPTOR BINDING DOMAIN FROM UROPATHOGENIC E. COLI
分子名称:FimH protein, BUTYL ALPHA-D-MANNOPYRANOSIDE, CACODYLATE ION, ...
著者Bouckaert, J., Berglund, J., Schembri, M., De Genst, E., Cools, L., Wuhrer, M., Hung, C.S., Pinkner, J., Slattegard, R., Zavialov, A., Choudhury, D., Langermann, S., Hultgren, S.J., Wyns, L., Klemm, P., Oscarson, S., Knight, S.D., De Greve, H.
登録日2004-06-21
公開日2005-05-03
最終更新日2011-07-13
実験手法X-RAY DIFFRACTION (2.1 Å)
主引用文献Receptor binding studies disclose a novel class of high-affinity inhibitors of the Escherichia coli FimH adhesin
Mol.Microbiol., 55, 2005
1UWF
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1.7 A RESOLUTION STRUCTURE OF THE RECEPTOR BINDING DOMAIN OF THE FIMH ADHESIN FROM UROPATHOGENIC E. COLI
分子名称:FIMH PROTEIN, BUTYL ALPHA-D-MANNOPYRANOSIDE, GLYCEROL
著者Bouckaert, J., Berglund, J., Genst, E.D., Cools, L., Hung, C.-S., Wuhrer, M., Zavialov, A., Langermann, S., Hultgren, S., Wyns, L., Oscarson, S., Knight, S.D., De Greve, H.
登録日2004-02-05
公開日2005-02-16
最終更新日2015-04-15
実験手法X-RAY DIFFRACTION (1.69 Å)
主引用文献Receptor Binding Studies Disclose a Novel Class of High-Affinity Inhibitors of the Escherichia Coli Fimh Adhesin.
Mol.Microbiol., 55, 2005
1ZO1
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IF2, IF1, AND TRNA FITTED TO CRYO-EM DATA OF E. COLI 70S INITIATION COMPLEX
分子名称:P/I-site tRNA, translation initiation factor 2, translation Initiation Factor 1
著者Allen, G.S., Zavialov, A., Gursky, R., Ehrenberg, M., Frank, J.
登録日2005-05-12
公開日2005-06-14
最終更新日2011-07-13
実験手法ELECTRON MICROSCOPY (13.8 Å)
主引用文献The Cryo-EM Structure of a Translation Initiation Complex from Escherichia coli.
Cell(Cambridge,Mass.), 121, 2005
1ZO3
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THE P-SITE AND P/E-SITE TRNA STRUCTURES FITTED TO P/I SITE CODON.
分子名称:tRNA
著者Allen, G.S., Zavialov, A., Gursky, R., Ehrenberg, M., Frank, J.
登録日2005-05-12
公開日2005-06-14
最終更新日2011-07-13
実験手法ELECTRON MICROSCOPY (13.8 Å)
主引用文献The Cryo-EM Structure of a Translation Initiation Complex from Escherichia coli.
Cell(Cambridge,Mass.), 121, 2005
2FVO
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DOCKING OF THE MODIFIED RF1 X-RAY STRUCTURE INTO THE LOW RESOLUTION CRYO-EM MAP OF E.COLI 70S RIBOSOME BOUND WITH RF1
分子名称:Peptide chain release factor 1
著者Rawat, U., Gao, H., Zavialov, A., Gursky, R., Ehrenberg, M., Frank, J.
登録日2006-01-31
公開日2006-04-04
最終更新日2018-07-18
実験手法ELECTRON MICROSCOPY (12.8 Å)
主引用文献Interactions of the Release Factor RF1 with the Ribosome as Revealed by Cryo-EM.
J.Mol.Biol., 357, 2006
2O0F
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DOCKING OF THE MODIFIED RF3 X-RAY STRUCTURE INTO CRYO-EM MAP OF E.COLI 70S RIBOSOME BOUND WITH RF3
分子名称:Peptide chain release factor 3
著者Gao, H., Zhou, Z., Rawat, U., Huang, C., Bouakaz, L., Wang, C., Liu, Y., Zavialov, A., Gursky, R., Sanyal, S., Ehrenberg, M., Frank, J., Song, H.
登録日2006-11-27
公開日2007-07-24
最終更新日2018-07-18
実験手法ELECTRON MICROSCOPY (15.5 Å)
主引用文献RF3 induces ribosomal conformational changes responsible for dissociation of class I release factors
Cell(Cambridge,Mass.), 129, 2007
1P5U
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X-RAY STRUCTURE OF THE TERNARY CAF1M:CAF1:CAF1 CHAPERONE:SUBUNIT:SUBUNIT COMPLEX
分子名称:Chaperone protein Caf1M, F1 capsule antigen
著者Zavialov, A.V., Berglund, J., Pudney, A.F., Fooks, L.J., Ibrahim, T.M., MacIntyre, S., Knight, S.D.
登録日2003-04-28
公開日2003-06-24
最終更新日2011-07-13
実験手法X-RAY DIFFRACTION (1.99 Å)
主引用文献Structure and Biogenesis of the Capsular F1 Antigen from Yersinia pestis. Preserved Folding Energy Drives Fiber Formation
Cell(Cambridge,Mass.), 113, 2003
1P5V
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X-RAY STRUCTURE OF THE CAF1M:CAF1 CHAPERONE:SUBUNIT PREASSEMBLY COMPLEX
分子名称:Chaperone protein Caf1M, F1 capsule antigen
著者Zavialov, A.V., Berglund, J., Pudney, A.F., Fooks, L.J., Ibrahim, T.M., MacIntyre, S., Knight, S.D.
登録日2003-04-28
公開日2003-06-24
最終更新日2018-03-07
実験手法X-RAY DIFFRACTION (1.7 Å)
主引用文献Structure and Biogenesis of the Capsular F1 Antigen from Yersinia pestis. Preserved Folding Energy Drives Fiber Formation
Cell(Cambridge,Mass.), 113, 2003
1ZN1
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COORDINATES OF RRF FITTED INTO CRYO-EM MAP OF THE 70S POST-TERMINATION COMPLEX
分子名称:ribosomal 23S RNA, ribosomal 16S RNA, Ribosome recycling factor, ...
著者Gao, N., Zavialov, A.V., Li, W., Sengupta, J., Valle, M., Gursky, R.P., Ehrenberg, M., Frank, J.
登録日2005-05-11
公開日2005-06-14
最終更新日2018-01-31
実験手法ELECTRON MICROSCOPY (14.1 Å)
主引用文献Mechanism for the disassembly of the posttermination complex inferred from cryo-EM studies.
Mol.Cell, 18, 2005
1ZN0
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COORDINATES OF RRF AND EF-G FITTED INTO CRYO-EM MAP OF THE 50S SUBUNIT BOUND WITH BOTH EF-G (GDPNP) AND RRF
分子名称:16S RIBOSOMAL RNA, Ribosome recycling factor, ELONGATION FACTOR G
著者Gao, N., Zavialov, A.V., Li, W., Sengupta, J., Valle, M., Gursky, R.P., Ehrenberg, M., Frank, J.
登録日2005-05-11
公開日2005-06-14
最終更新日2011-07-13
実験手法ELECTRON MICROSCOPY (15.5 Å)
主引用文献Mechanism for the disassembly of the posttermination complex inferred from cryo-EM studies.
Mol.Cell, 18, 2005
4PH8
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CRYSTAL STRUCTURE OF AGGA, THE MAJOR SUBUNIT OF AGGREGATIVE ADHERENCE FIMBRIAE TYPE I (AAF/I) FROM THE ESCHERICHIA COLI O4H104
分子名称:Aggregative adherence fimbrial subunit AggA, GLYCEROL
著者Pakharukova, N.A., Tuitilla, M., Zavialov, A.V.
登録日2014-05-05
公開日2014-10-01
実験手法X-RAY DIFFRACTION (1.55 Å)
主引用文献Structural Insight into Host Recognition by Aggregative Adherence Fimbriae of Enteroaggregative Escherichia coli.
Plos Pathog., 10, 2014
6FJY
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CRYSTAL STRUCTURE OF CSUC-CSUE CHAPERONE-TIP ADHESION SUBUNIT PRE-ASSEMBLY COMPLEX FROM ARCHAIC CHAPERONE-USHER CSU PILI OF ACINETOBACTER BAUMANNII
分子名称:CsuC, Protein CsuE
著者Pakharukova, N.A., Tuitilla, M., Paavilainen, S., Zavialov, A.V.
登録日2018-01-23
公開日2018-05-16
最終更新日2018-09-19
実験手法X-RAY DIFFRACTION (2.31 Å)
主引用文献Structural basis forAcinetobacter baumanniibiofilm formation.
Proc. Natl. Acad. Sci. U.S.A., 115, 2018
2H5E
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CRYSTAL STRUCTURE OF E.COLI POLYPEPTIDE RELEASE FACTOR RF3
分子名称:Peptide chain release factor RF-3, GUANOSINE-5'-DIPHOSPHATE
著者Song, H.W., Zhou, Z.H.
登録日2006-05-26
公開日2007-05-15
最終更新日2011-07-13
実験手法X-RAY DIFFRACTION (2.8 Å)
主引用文献RF3 induces ribosomal conformational changes responsible for dissociation of class I release factors
Cell(Cambridge,Mass.), 129, 2007
2Z9Q
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TRANSFER RNA IN THE HYBRID P/E STATE
分子名称:tRNA
著者Frank, J., Li, W.
登録日2007-09-25
公開日2007-10-16
最終更新日2011-07-13
実験手法ELECTRON MICROSCOPY (11.7 Å)
主引用文献Transfer RNA in the hybrid P/E state
To be Published
3EP2
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MODEL OF PHE-TRNA(PHE) IN THE RIBOSOMAL PRE-ACCOMMODATED STATE REVEALED BY CRYO-EM
分子名称:Elongation factor Tu, 30S ribosomal protein S12, 50S ribosomal protein L11, ...
著者Frank, J., Li, W., Agirrezabala, X.
登録日2008-09-29
公開日2008-12-16
最終更新日2018-07-18
実験手法ELECTRON MICROSCOPY (9 Å)
主引用文献Recognition of aminoacyl-tRNA: a common molecular mechanism revealed by cryo-EM.
Embo J., 27, 2008