Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help
Search by PDB author
5OPW
DownloadVisualize
BU of 5opw by Molmil
Crystal structure of the GroEL mutant A109C
Descriptor: 60 kDa chaperonin
Authors:Yan, X, Shi, Q, Bracher, A, Milicic, G, Singh, A.K, Hartl, F.U, Hayer-Hartl, M.
Deposit date:2017-08-10
Release date:2018-01-10
Last modified:2024-01-17
Method:X-RAY DIFFRACTION (3.19 Å)
Cite:GroEL Ring Separation and Exchange in the Chaperonin Reaction.
Cell, 172, 2018
5OPX
DownloadVisualize
BU of 5opx by Molmil
Crystal structure of the GroEL mutant A109C in complex with GroES and ADP BeF2
Descriptor: 10 kDa chaperonin, 60 kDa chaperonin, ADENOSINE-5'-DIPHOSPHATE, ...
Authors:Yan, X, Shi, Q, Bracher, A, Milicic, G, Singh, A.K, Hartl, F.U, Hayer-Hartl, M.
Deposit date:2017-08-10
Release date:2018-01-10
Last modified:2024-01-17
Method:X-RAY DIFFRACTION (3.64 Å)
Cite:GroEL Ring Separation and Exchange in the Chaperonin Reaction.
Cell, 172, 2018
6XKC
DownloadVisualize
BU of 6xkc by Molmil
Crystal structure of E3 ligase
Descriptor: Protein fem-1 homolog C
Authors:Yan, X, Dong, A, Bountra, C, Edwards, A.M, Arrowsmith, C.H, Min, J.R, Dong, C, Structural Genomics Consortium (SGC)
Deposit date:2020-06-26
Release date:2020-10-14
Last modified:2023-10-18
Method:X-RAY DIFFRACTION (2.03 Å)
Cite:Molecular basis for ubiquitin ligase CRL2 FEM1C -mediated recognition of C-degron.
Nat.Chem.Biol., 17, 2021
7JYA
DownloadVisualize
BU of 7jya by Molmil
Crystal structure of E3 ligase in complex with peptide
Descriptor: ASN-ARG-ARG-ARG-ARG-TRP-ARG-GLU-ARG-GLN-ARG, Protein fem-1 homolog C, UNKNOWN ATOM OR ION
Authors:Yan, X, Dong, A, Bountra, C, Edwards, A.M, Arrowsmith, C.H, Min, J.R, Dong, C, Structural Genomics Consortium (SGC)
Deposit date:2020-08-30
Release date:2020-10-14
Last modified:2023-10-18
Method:X-RAY DIFFRACTION (2.46 Å)
Cite:Molecular basis for ubiquitin ligase CRL2 FEM1C -mediated recognition of C-degron.
Nat.Chem.Biol., 17, 2021
7EP0
DownloadVisualize
BU of 7ep0 by Molmil
Crystal structure of ZYG11B bound to GSTE degron
Descriptor: Protein zyg-11 homolog B, sodium 3,3'-(1E,1'E)-biphenyl-4,4'-diylbis(diazene-2,1-diyl)bis(4-aminonaphthalene-1-sulfonate)
Authors:Yan, X, Li, Y.
Deposit date:2021-04-26
Release date:2021-07-14
Last modified:2021-09-01
Method:X-RAY DIFFRACTION (2.16 Å)
Cite:Molecular basis for recognition of Gly/N-degrons by CRL2 ZYG11B and CRL2 ZER1 .
Mol.Cell, 81, 2021
7EP3
DownloadVisualize
BU of 7ep3 by Molmil
Crystal structure of ZER1 bound to GAGN degron
Descriptor: Protein zer-1 homolog
Authors:Yan, X, Li, Y.
Deposit date:2021-04-26
Release date:2021-07-14
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (1.513 Å)
Cite:Molecular basis for recognition of Gly/N-degrons by CRL2 ZYG11B and CRL2 ZER1 .
Mol.Cell, 81, 2021
7EP2
DownloadVisualize
BU of 7ep2 by Molmil
Crystal structure of ZYG11B bound to GGFN degron
Descriptor: Protein zyg-11 homolog B
Authors:Yan, X, Li, Y.
Deposit date:2021-04-26
Release date:2021-07-14
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (2.38 Å)
Cite:Molecular basis for recognition of Gly/N-degrons by CRL2 ZYG11B and CRL2 ZER1 .
Mol.Cell, 81, 2021
7EP5
DownloadVisualize
BU of 7ep5 by Molmil
Crystal structure of ZER1 bound to GKLH degron
Descriptor: Protein zer-1 homolog
Authors:Yan, X, Li, Y.
Deposit date:2021-04-26
Release date:2021-07-14
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (2.02 Å)
Cite:Molecular basis for recognition of Gly/N-degrons by CRL2 ZYG11B and CRL2 ZER1 .
Mol.Cell, 81, 2021
7EP1
DownloadVisualize
BU of 7ep1 by Molmil
Crystal structure of ZYG11B bound to GFLH degron
Descriptor: Protein zyg-11 homolog B
Authors:Yan, X, Li, Y.
Deposit date:2021-04-26
Release date:2021-07-14
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (1.852 Å)
Cite:Molecular basis for recognition of Gly/N-degrons by CRL2 ZYG11B and CRL2 ZER1 .
Mol.Cell, 81, 2021
7EP4
DownloadVisualize
BU of 7ep4 by Molmil
Crystal structure of ZER1 bound to GFLH degron
Descriptor: Protein zer-1 homolog
Authors:Yan, X, Li, Y.
Deposit date:2021-04-26
Release date:2021-07-14
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (2.07 Å)
Cite:Molecular basis for recognition of Gly/N-degrons by CRL2 ZYG11B and CRL2 ZER1 .
Mol.Cell, 81, 2021
1AQZ
DownloadVisualize
BU of 1aqz by Molmil
CRYSTAL STRUCTURE OF A HIGHLY SPECIFIC ASPERGILLUS RIBOTOXIN, RESTRICTOCIN
Descriptor: PHOSPHATE ION, RESTRICTOCIN
Authors:Yang, X, Moffat, K.
Deposit date:1997-08-04
Release date:1997-11-12
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:Insights into specificity of cleavage and mechanism of cell entry from the crystal structure of the highly specific Aspergillus ribotoxin, restrictocin.
Structure, 4, 1996
3LRA
DownloadVisualize
BU of 3lra by Molmil
Structural Basis for Assembling a Human Tripartite Complex Dlg1-MPP7-Mals3
Descriptor: Disks large homolog 1, MAGUK p55 subfamily member 7, Protein lin-7 homolog C
Authors:Yang, X, Xie, X, Shen, Y, Long, J.
Deposit date:2010-02-10
Release date:2010-11-17
Last modified:2024-03-20
Method:X-RAY DIFFRACTION (2.95 Å)
Cite:Structural basis for tandem L27 domain-mediated polymerization
Faseb J., 24, 2010
4ZYL
DownloadVisualize
BU of 4zyl by Molmil
Crystal structure of response regulator RPA3017 in red light signaling of R. palustris
Descriptor: RphyB protein
Authors:Yang, X, Moffat, K.
Deposit date:2015-05-21
Release date:2015-10-14
Last modified:2024-03-06
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Structure of the response regulator RPA3017 involved in red-light signaling in Rhodopseudomonas palustris.
Acta Crystallogr F Struct Biol Commun, 71, 2015
3IR1
DownloadVisualize
BU of 3ir1 by Molmil
Crystal Structure of Lipoprotein GNA1946 from Neisseria meningitidis
Descriptor: METHIONINE, Outer membrane lipoprotein GNA1946, SULFATE ION
Authors:Yang, X, Wu, Z, Wang, X, Shen, Y.
Deposit date:2009-08-21
Release date:2009-10-13
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (2.15 Å)
Cite:Crystal structure of lipoprotein GNA1946 from Neisseria meningitidis
J.Struct.Biol., 168, 2009
3GXA
DownloadVisualize
BU of 3gxa by Molmil
Crystal structure of GNA1946
Descriptor: METHIONINE, Outer membrane lipoprotein GNA1946, SULFATE ION
Authors:Yang, X, Shen, Y.
Deposit date:2009-04-02
Release date:2009-10-13
Last modified:2024-03-20
Method:X-RAY DIFFRACTION (2.25 Å)
Cite:Crystal structure of lipoprotein GNA1946 from Neisseria meningitidis
J.Struct.Biol., 168, 2009
8CX4
DownloadVisualize
BU of 8cx4 by Molmil
TCR-antigen complex AS8.4-YEIH-HLA*B27
Descriptor: AS8.4a, AS8.4b, Beta-2-microglobulin, ...
Authors:Yang, X, Jude, K.M, Garcia, K.C.
Deposit date:2022-05-19
Release date:2022-12-07
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Autoimmunity-associated T cell receptors recognize HLA-B*27-bound peptides.
Nature, 612, 2022
8J5U
DownloadVisualize
BU of 8j5u by Molmil
Crystal structure of Mycobacterium tuberculosis OppA complexed with an endogenous oligopeptide
Descriptor: Endogenous oligopeptide, Uncharacterized protein Rv1280c
Authors:Yang, X, Hu, T, Zhang, B, Rao, Z.
Deposit date:2023-04-24
Release date:2024-04-03
Last modified:2024-07-31
Method:X-RAY DIFFRACTION (1.98 Å)
Cite:An oligopeptide permease, OppABCD, requires an iron-sulfur cluster domain for functionality.
Nat.Struct.Mol.Biol., 31, 2024
8J5S
DownloadVisualize
BU of 8j5s by Molmil
Cryo-EM structure of Mycobacterium tuberculosis OppABCD in the pre-catalytic intermediate state
Descriptor: Endogenous oligopeptide, IRON/SULFUR CLUSTER, MAGNESIUM ION, ...
Authors:Yang, X, Hu, T, Zhang, B, Rao, Z.
Deposit date:2023-04-24
Release date:2024-04-03
Last modified:2024-07-31
Method:ELECTRON MICROSCOPY (3 Å)
Cite:An oligopeptide permease, OppABCD, requires an iron-sulfur cluster domain for functionality.
Nat.Struct.Mol.Biol., 31, 2024
8J5R
DownloadVisualize
BU of 8j5r by Molmil
Cryo-EM structure of Mycobacterium tuberculosis OppABCD in the resting state
Descriptor: IRON/SULFUR CLUSTER, Putative peptide transport permease protein Rv1282c, Putative peptide transport permease protein Rv1283c, ...
Authors:Yang, X, Hu, T, Zhang, B, Rao, Z.
Deposit date:2023-04-24
Release date:2024-04-03
Last modified:2024-07-31
Method:ELECTRON MICROSCOPY (3.28 Å)
Cite:An oligopeptide permease, OppABCD, requires an iron-sulfur cluster domain for functionality.
Nat.Struct.Mol.Biol., 31, 2024
8J5T
DownloadVisualize
BU of 8j5t by Molmil
Cryo-EM structure of Mycobacterium tuberculosis OppABCD in the catalytic intermediate state
Descriptor: ADENOSINE-5'-TRIPHOSPHATE, IRON/SULFUR CLUSTER, MAGNESIUM ION, ...
Authors:Yang, X, Hu, T, Zhang, B, Rao, Z.
Deposit date:2023-04-24
Release date:2024-04-03
Last modified:2024-07-31
Method:ELECTRON MICROSCOPY (2.98 Å)
Cite:An oligopeptide permease, OppABCD, requires an iron-sulfur cluster domain for functionality.
Nat.Struct.Mol.Biol., 31, 2024
8J5Q
DownloadVisualize
BU of 8j5q by Molmil
Cryo-EM structure of Mycobacterium tuberculosis OppABCD in the pre-translocation state
Descriptor: Endogenous oligopeptide, IRON/SULFUR CLUSTER, Putative peptide transport permease protein Rv1282c, ...
Authors:Yang, X, Hu, T, Zhang, B, Rao, Z.
Deposit date:2023-04-24
Release date:2024-04-03
Last modified:2024-07-31
Method:ELECTRON MICROSCOPY (3.25 Å)
Cite:An oligopeptide permease, OppABCD, requires an iron-sulfur cluster domain for functionality.
Nat.Struct.Mol.Biol., 31, 2024
5B0D
DownloadVisualize
BU of 5b0d by Molmil
Polyketide cyclase OAC from Cannabis sativa, Y27W mutant
Descriptor: Olivetolic acid cyclase
Authors:Yang, X, Matsui, T, Mori, T, Abe, I, Morita, H.
Deposit date:2015-10-28
Release date:2016-01-27
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (1.801 Å)
Cite:Structural basis for olivetolic acid formation by a polyketide cyclase from Cannabis sativa
Febs J., 283, 2016
5B0E
DownloadVisualize
BU of 5b0e by Molmil
Polyketide cyclase OAC from Cannabis sativa, V59M mutant
Descriptor: GLYCEROL, Olivetolic acid cyclase
Authors:Yang, X, Matsui, T, Mori, T, Abe, I, Morita, H.
Deposit date:2015-10-28
Release date:2016-01-27
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (1.603 Å)
Cite:Structural basis for olivetolic acid formation by a polyketide cyclase from Cannabis sativa
Febs J., 283, 2016
5B0F
DownloadVisualize
BU of 5b0f by Molmil
Polyketide cyclase OAC from Cannabis sativa, Y72F mutant
Descriptor: GLYCEROL, Olivetolic acid cyclase
Authors:Yang, X, Matsui, T, Mori, T, Abe, I, Morita, H.
Deposit date:2015-10-28
Release date:2016-01-27
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (1.6 Å)
Cite:Structural basis for olivetolic acid formation by a polyketide cyclase from Cannabis sativa
Febs J., 283, 2016
5B0C
DownloadVisualize
BU of 5b0c by Molmil
Polyketide cyclase OAC from Cannabis sativa, Y27F mutant
Descriptor: Olivetolic acid cyclase
Authors:Yang, X, Matsui, T, Mori, T, Abe, I, Morita, H.
Deposit date:2015-10-28
Release date:2016-01-27
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (1.602 Å)
Cite:Structural basis for olivetolic acid formation by a polyketide cyclase from Cannabis sativa
Febs J., 283, 2016

225158

PDB entries from 2024-09-18

PDB statisticsPDBj update infoContact PDBjnumon