Author results

1CBI
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APO-CELLULAR RETINOIC ACID BINDING PROTEIN I
Descriptor:CELLULAR RETINOIC ACID BINDING PROTEIN I
Authors:Thompson, J.R., Bratt, J.M., Banaszak, L.J.
Deposit date:1995-07-12
Release date:1995-11-14
Last modified:2017-11-29
Method:X-RAY DIFFRACTION (2.7 Å)
Cite:Crystal structure of cellular retinoic acid binding protein I shows increased access to the binding cavity due to formation of an intermolecular beta-sheet.
J.Mol.Biol., 252, 1995
1LSH
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LIPID-PROTEIN INTERACTIONS IN LIPOVITELLIN
Descriptor:LIPOVITELLIN (LV-1N, LV-1C), LIPOVITELLIN (LV-2), ...
Authors:Thompson, J.R., Banaszak, L.J.
Deposit date:2002-05-17
Release date:2002-07-31
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Lipid-protein interactions in lipovitellin.
Biochemistry, 41, 2002
1YBA
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THE ACTIVE FORM OF PHOSPHOGLYCERATE DEHYDROGENASE
Descriptor:D-3-phosphoglycerate dehydrogenase, PHOSPHATE ION, 2-OXOGLUTARIC ACID, ...
Authors:Thompson, J.R., Banaszak, L.J.
Deposit date:2004-12-20
Release date:2005-04-26
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (2.24 Å)
Cite:Vmax Regulation through Domain and Subunit Changes. The Active Form of Phosphoglycerate Dehydrogenase
Biochemistry, 44, 2005
2GGM
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HUMAN CENTRIN 2 XERODERMA PIGMENTOSUM GROUP C PROTEIN COMPLEX
Descriptor:Centrin-2, DNA-repair protein complementing XP-C cells, CALCIUM ION
Authors:Thompson, J.R.
Deposit date:2006-03-24
Release date:2006-04-25
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (2.35 Å)
Cite:The structure of the human centrin 2-xeroderma pigmentosum group C protein complex.
J.Biol.Chem., 281, 2006
2Q1E
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ALTERED DIMER INTERFACE DECREASES STABILITY IN AN AMYLOIDOGENIC KAPPA1 BENCE JONES PROTEIN.
Descriptor:Amyloidogenic immunoglobulin light chain protein AL-09, SULFATE ION
Authors:Thompson, J.R., Ramirez-Alvarado, M., Baden, E.M.
Deposit date:2007-05-24
Release date:2008-04-08
Last modified:2017-10-18
Method:X-RAY DIFFRACTION (2.55 Å)
Cite:Altered dimer interface decreases stability in an amyloidogenic protein.
J.Biol.Chem., 283, 2008
2Q20
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STRUCTURE OF THE GERMLINE VK1 O18/O8 LIGHT CHAIN VARIABLE DOMAIN HOMODIMER
Descriptor:Vk1 O18/O8 germline light chain variable domain
Authors:Thompson, J.R., Ramirez-Alvarado, M., Baden, E.M.
Deposit date:2007-05-25
Release date:2008-04-08
Last modified:2017-10-18
Method:X-RAY DIFFRACTION (1.3 Å)
Cite:Altered dimer interface decreases stability in an amyloidogenic protein.
J.Biol.Chem., 283, 2008
3DVI
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CRYSTAL STRUCTURE OF KAPPA 1 AMYLOIDOGENIC LIGHT CHAIN VARIABLE DOMAIN
Descriptor:Amyloidogenic light chain variable domain AL-103
Authors:Thompson, J.R., Randles, E.G., Ramirez-Alvarado, M.
Deposit date:2008-07-18
Release date:2009-05-12
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (1.53 Å)
Cite:Structural alterations within native amyloidogenic immunoglobulin light chains.
J.Mol.Biol., 389, 2009
4K07
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CRYSTAL STRUCTURE OF THE AMYLOID-FORMING IMMUNOGLOBULIN AL-103 CIS-PROLINE 95 MUTANT
Descriptor:Amyloidogenic immunoglobulin light chain protein AL-103, SULFATE ION
Authors:Thompson, J.R., Berkholz, D.S., Mahlum, E.W., Ramirez-Alvarado, M.
Deposit date:2013-04-03
Release date:2013-10-30
Last modified:2014-01-22
Method:X-RAY DIFFRACTION (2.83 Å)
Cite:Kinetic control in protein folding for light chain amyloidosis and the differential effects of somatic mutations.
J.Mol.Biol., 426, 2014
6CO2
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STRUCTURE OF AN ENGINEERED PROTEIN (NUDT16TI) IN COMPLEX WITH 53BP1 TUDOR DOMAINS
Descriptor:NUDT16-Tudor-interacting (NUDT16TI), TP53-binding protein 1
Authors:Botuyan, M.V., Thompson, J.R., Cui, G., Mer, G.
Deposit date:2018-03-10
Release date:2018-06-06
Last modified:2018-07-25
Method:X-RAY DIFFRACTION (2.49 Å)
Cite:Mechanism of 53BP1 activity regulation by RNA-binding TIRR and a designer protein.
Nat. Struct. Mol. Biol., 25, 2018
1IB6
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CRYSTAL STRUCTURE OF R153C E. COLI MALATE DEHYDROGENASE
Descriptor:MALATE DEHYDROGENASE, SULFATE ION, NICOTINAMIDE-ADENINE-DINUCLEOTIDE
Authors:Bell, J.K., Yennawar, H.P., Wright, S.K., Thompson, J.R., Viola, R.E., Banaszak, L.J.
Deposit date:2001-03-27
Release date:2001-09-19
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Structural Analyses of a Malate Dehydrogenase with a Variable Active Site
J.Biol.Chem., 276, 2001
1IE3
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CRYSTAL STRUCTURE OF R153C E. COLI MALATE DEHYDROGENASE
Descriptor:MALATE DEHYDROGENASE, NICOTINAMIDE-ADENINE-DINUCLEOTIDE, PYRUVIC ACID
Authors:Bell, J.K., Yennawar, H.P., Wright, S.K., Thompson, J.R., Viola, R.E., Banaszak, L.J.
Deposit date:2001-04-05
Release date:2001-09-19
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:Structural Analyses of a Malate Dehydrogenase with a Variable Active Site
J.Biol.Chem., 276, 2001
2B02
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CRYSTAL STRUCTURE OF ARNT PAS-B DOMAIN
Descriptor:Aryl hydrocarbon receptor nuclear translocator
Authors:Lee, J., Botuyan, M.V., Nomine, Y., Ohh, M., Thompson, J.R., Mer, G.
Deposit date:2005-09-12
Release date:2006-10-24
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (1.5 Å)
Cite:Crystal Structure and Binding Properties of ARNT PAS-B Heterodimerization Domain
To be Published
2ETX
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CRYSTAL STRUCTURE OF MDC1 TANDEM BRCT DOMAINS
Descriptor:Mediator of DNA damage checkpoint protein 1
Authors:Wasielewski, E., Kim, Y., Joachimiak, A., Thompson, J.R., Mer, G.
Deposit date:2005-10-27
Release date:2005-11-15
Last modified:2012-02-22
Method:X-RAY DIFFRACTION (1.33 Å)
Cite:Molecular Basis for the Association of Microcephalin (MCPH1) Protein with the Cell Division Cycle Protein 27 (Cdc27) Subunit of the Anaphase-promoting Complex.
J.Biol.Chem., 287, 2012
2FHD
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CRYSTAL STRUCTURE OF CRB2 TANDEM TUDOR DOMAINS
Descriptor:DNA repair protein rhp9/CRB2, PHOSPHATE ION
Authors:Lee, J., Botuyan, M.V., Thompson, J.R., Mer, G.
Deposit date:2005-12-23
Release date:2007-01-02
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:Structural basis for the methylation state-specific recognition of histone H4-K20 by 53BP1 and Crb2 in DNA repair.
Cell(Cambridge,Mass.), 127, 2006
2G3R
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CRYSTAL STRUCTURE OF 53BP1 TANDEM TUDOR DOMAINS AT 1.2 A RESOLUTION
Descriptor:Tumor suppressor p53-binding protein 1, SULFATE ION
Authors:Lee, J., Botuyan, M.V., Thompson, J.R., Mer, G.
Deposit date:2006-02-20
Release date:2007-01-02
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (1.25 Å)
Cite:Structural Basis for the Methylation State-Specific Recognition of Histone H4-K20 by 53BP1 and Crb2 in DNA Repair.
Cell(Cambridge,Mass.), 127, 2006
3CDC
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KI O18/O8 N34I/Y87H IMMUNOGLOBULIN LIGHT CHAIN VARIABLE DOMAIN
Descriptor:Light Chain Amyloidogenic
Authors:Baden, E.M., Randles, E.G., Thompson, J.R., Ramirez-Alvarado, M.
Deposit date:2008-02-26
Release date:2008-09-02
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (1.53 Å)
Cite:Structural insights into the role of mutations in amyloidogenesis.
J.Biol.Chem., 283, 2008
3CDF
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KI O18/O8 Y87H IMMUNOGLOBULIN LIGHT CHAIN VARIABLE DOMAIN
Descriptor:IMMUNOGLOBULIN LIGHT CHAIN
Authors:Baden, E.M., Randles, E.G., Thompson, J.R., Ramirez-Alvarado, M.
Deposit date:2008-02-26
Release date:2008-09-02
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (1.53 Å)
Cite:Structural insights into the role of mutations in amyloidogenesis.
J.Biol.Chem., 283, 2008
3CDY
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AL-09 H87Y, IMMUNOGLOBULIN LIGHT CHAIN VARIABLE DOMAIN
Descriptor:IMMUNOGLOBULIN LIGHT CHAIN
Authors:Baden, E.M., Randles, E.G., Aboagye, A.K., Thompson, J.R., Ramirez-Alvarado, M.
Deposit date:2008-02-27
Release date:2008-09-02
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (2.43 Å)
Cite:Structural insights into the role of mutations in amyloidogenesis.
J.Biol.Chem., 283, 2008
3DVF
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STRUCTURE OF AMYLOIDOGENIC KAPPA 1 BENCE JONES PROTEIN
Descriptor:Amyloidogenic immunoglobulin light chain protein AL-12
Authors:Randles, E.G., Thompson, J.R., Ramirez-Alvarado, M.
Deposit date:2008-07-18
Release date:2009-05-12
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Structural alterations within native amyloidogenic immunoglobulin light chains.
J.Mol.Biol., 389, 2009
3FSS
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STRUCTURE OF THE TANDEM PH DOMAINS OF RTT106
Descriptor:Histone chaperone RTT106, GLYCEROL, MALONIC ACID
Authors:Su, D., Thompson, J.R., Mer, G.
Deposit date:2009-01-11
Release date:2009-12-22
Last modified:2015-04-29
Method:X-RAY DIFFRACTION (1.432 Å)
Cite:Structural basis for recognition of H3K56-acetylated histone H3-H4 by the chaperone Rtt106.
Nature, 483, 2012
3FY3
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CRYSTAL STRUCTURE OF TRUNCATED HEMOLYSIN A FROM P. MIRABILIS
Descriptor:Hemolysin
Authors:Weaver, T.M., Thompson, J.R., Bailey, L.J., Wawrzyn, G.T., Hocking, J.M., Howard, D.R.
Deposit date:2009-01-21
Release date:2009-06-02
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Structural and functional studies of truncated hemolysin A from Proteus mirabilis.
J.Biol.Chem., 284, 2009
3KTF
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STRUCTURE OF THE N-TERMINAL BRCT DOMAIN OF HUMAN MICROCEPHALIN (MCPH1).
Descriptor:Microcephalin, CHLORIDE ION
Authors:Singh, N., Heroux, A., Thompson, J.R., Mer, G.
Deposit date:2009-11-25
Release date:2009-12-15
Last modified:2017-11-01
Method:X-RAY DIFFRACTION (1.6 Å)
Cite:Structure of N-terminal BRCT domain of human microcephalin (MCPH1)
To be Published
3L1X
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CRYSTAL STRUCTURE OF U-BOX DOMAIN OF HUMAN E4B UBIQUITIN LIGASE
Descriptor:Ubiquitin conjugation factor E4 B
Authors:Benirschke, R., Thompson, J.R., Mer, G.
Deposit date:2009-12-14
Release date:2010-05-05
Last modified:2011-11-16
Method:X-RAY DIFFRACTION (2.6 Å)
Cite:Molecular Basis for the Association of Human E4B U Box Ubiquitin Ligase with E2-Conjugating Enzymes UbcH5c and Ubc4.
Structure, 18, 2010
3L1Y
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CRYSTAL STRUCTURE OF HUMAN UBC4 E2 CONJUGATING ENZYME
Descriptor:Ubiquitin-conjugating enzyme E2 D2
Authors:Benirschke, R., Thompson, J.R., Mer, G.
Deposit date:2009-12-14
Release date:2010-05-05
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (1.6 Å)
Cite:Molecular Basis for the Association of Human E4B U Box Ubiquitin Ligase with E2-Conjugating Enzymes UbcH5c and Ubc4.
Structure, 18, 2010
3L1Z
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CRYSTAL STRUCTURE OF THE U-BOX DOMAIN OF HUMAN E4B UBIQUITIN LIGASE IN COMPLEX WITH UBCH5C E2 UBIQUITIN CONJUGATING ENZYME
Descriptor:Ubiquitin-conjugating enzyme E2 D3, Ubiquitin conjugation factor E4 B
Authors:Benirschke, R., Thompson, J.R., Mer, G.
Deposit date:2009-12-14
Release date:2010-05-05
Last modified:2011-12-28
Method:X-RAY DIFFRACTION (3.17 Å)
Cite:Molecular Basis for the Association of Human E4B U Box Ubiquitin Ligase with E2-Conjugating Enzymes UbcH5c and Ubc4.
Structure, 18, 2010
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