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2ZK7
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STRUCTURE OF A C-TERMINAL DELETION MUTANT OF THERMOPLASMA ACIDOPHILUM ALDOHEXOSE DEHYDROGENASE (ALDT)
Descriptor:Glucose 1-dehydrogenase related protein
Authors:Nishioka, T., Yasutake, Y., Nishiya, Y., Tamura, N., Tamura, T.
Deposit date:2008-03-12
Release date:2009-01-13
Last modified:2014-01-22
Method:X-RAY DIFFRACTION (2.71 Å)
Cite:C-terminal tail derived from the neighboring subunit is critical for the activity of Thermoplasma acidophilum D-aldohexose dehydrogenase
Proteins, 74, 2009
2DTD
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STRUCTURE OF THERMOPLASMA ACIDOPHILUM ALDOHEXOSE DEHYDROGENASE (ALDT) IN LIGAND-FREE FORM
Descriptor:Glucose 1-dehydrogenase related protein, SULFATE ION
Authors:Yasutake, Y., Nishiya, Y., Tamura, N., Tamura, T.
Deposit date:2006-07-12
Release date:2007-03-27
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Structural Insights into Unique Substrate Selectivity of Thermoplasma acidophilumd-Aldohexose Dehydrogenase
J.Mol.Biol., 367, 2007
2DTE
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STRUCTURE OF THERMOPLASMA ACIDOPHILUM ALDOHEXOSE DEHYDROGENASE (ALDT) IN COMPLEX WITH NADH
Descriptor:Glucose 1-dehydrogenase related protein, 1,4-DIHYDRONICOTINAMIDE ADENINE DINUCLEOTIDE
Authors:Yasutake, Y., Nishiya, Y., Tamura, N., Tamura, T.
Deposit date:2006-07-12
Release date:2007-03-27
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (1.65 Å)
Cite:Structural Insights into Unique Substrate Selectivity of Thermoplasma acidophilumd-Aldohexose Dehydrogenase
J.Mol.Biol., 367, 2007
2DTX
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STRUCTURE OF THERMOPLASMA ACIDOPHILUM ALDOHEXOSE DEHYDROGENASE (ALDT) IN COMPLEX WITH D-MANNOSE
Descriptor:Glucose 1-dehydrogenase related protein, BETA-D-MANNOSE, SULFATE ION
Authors:Yasutake, Y., Nishiya, Y., Tamura, N., Tamura, T.
Deposit date:2006-07-18
Release date:2007-03-27
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (1.6 Å)
Cite:Structural Insights into Unique Substrate Selectivity of Thermoplasma acidophilumd-Aldohexose Dehydrogenase
J.Mol.Biol., 367, 2007
2GOP
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THE BETA-PROPELLER DOMAIN OF THE TRILOBED PROTEASE FROM PYROCOCCUS FURIOSUS REVEALS AN OPEN VELCRO TOPOLOGY
Descriptor:Trilobed Protease
Authors:Bosch, J., Tamura, T., Tamura, N., Baumeister, W., Essen, L.-O.
Deposit date:2006-04-13
Release date:2007-01-23
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (2 Å)
Cite:The beta-propeller domain of the trilobed protease from Pyrococcus furiosus reveals an open Velcro topology.
Acta Crystallogr.,Sect.D, 63, 2007
1UKJ
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DETAILED STRUCTURE OF L-METHIONINE-LYASE FROM PSEUDOMONAS PUTIDA
Descriptor:Methionine gamma-lyase, SULFATE ION
Authors:Misaki, S., Takimoto, A., Takakura, T., Yoshioka, T., Yamashita, M., Tamura, T., Tanaka, H., Inagaki, K.
Deposit date:2003-08-24
Release date:2004-10-19
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Detailed structure of L-Methionine -Lyase from Pseudomonas putida
To be Published
2O7C
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CRYSTAL STRUCTURE OF L-METHIONINE-LYASE FROM PSEUDOMONAS
Descriptor:Methionine gamma-lyase, SULFATE ION
Authors:Misaki, S., Takimoto, A., Takakura, T., Yoshioka, T., Yamashita, M., Tamura, T., Tanaka, H., Inagaki, K.
Deposit date:2006-12-10
Release date:2007-12-11
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:Structure of the antitumour enzyme L-methionine gamma-lyase from Pseudomonas putida at 1.8 A resolution
J.Biochem.(Tokyo), 141, 2007
1GC0
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CRYSTAL STRUCTURE OF THE PYRIDOXAL-5'-PHOSPHATE DEPENDENT L-METHIONINE GAMMA-LYASE FROM PSEUDOMONAS PUTIDA
Descriptor:METHIONINE GAMMA-LYASE
Authors:Motoshima, H., Inagaki, K., Kumasaka, T., Furuichi, M., Inoue, H., Tamura, T., Esaki, N., Soda, K., Tanaka, N., Yamamoto, M., Tanaka, H.
Deposit date:2000-07-06
Release date:2002-05-08
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:Crystal structure of the pyridoxal 5'-phosphate dependent L-methionine gamma-lyase from Pseudomonas putida
J.BIOCHEM.(TOKYO), 128, 2000
1GC2
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CRYSTAL STRUCTURE OF THE PYRIDOXAL-5'-PHOSPHATE DEPENDENT L-METHIONINE GAMMA-LYASE FROM PSEUDOMONAS PUTIDA
Descriptor:METHIONINE GAMMA-LYASE
Authors:Motoshima, H., Inagaki, K., Kumasaka, T., Furuichi, M., Inoue, H., Tamura, T., Esaki, N., Soda, K., Tanaka, N., Yamamoto, M., Tanaka, H.
Deposit date:2000-07-06
Release date:2002-05-08
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (2 Å)
Cite:Crystal structure of the pyridoxal 5'-phosphate dependent L-methionine gamma-lyase from Pseudomonas putida
J.BIOCHEM.(TOKYO), 128, 2000
2D6Y
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CRYSTAL STRUCTURE OF TRANSCRIPTIONAL FACTOR SCO4008 FROM STREPTOMYCES COELICOLOR A3(2)
Descriptor:putative tetR family regulatory protein, L(+)-TARTARIC ACID
Authors:Hayashi, T., Tanaka, Y., Sakai, N., Yao, M., Tamura, T., Tanaka, I.
Deposit date:2005-11-15
Release date:2006-10-31
Last modified:2013-09-04
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:SCO4008, a Putative TetR Transcriptional Repressor from Streptomyces coelicolor A3(2), Regulates Transcription of sco4007 by Multidrug Recognition.
J.Mol.Biol., 425, 2013
2DG6
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CRYSTAL STRUCTURE OF THE PUTATIVE TRANSCRIPTIONAL REGULATOR SCO5550 FROM STREPTOMYCES COELICOLOR A3(2)
Descriptor:putative transcriptional regulator
Authors:Hayashi, T., Tanaka, Y., Sakai, N., Yao, M., Tamura, T., Tanaka, I.
Deposit date:2006-03-08
Release date:2007-03-13
Last modified:2018-03-28
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Structural and genomic DNA analysis of a putative transcription factor SCO5550 from Streptomyces coelicolor A3(2): regulating the expression of gene sco5551 as a transcriptional activator with a novel dimer shape
Biochem. Biophys. Res. Commun., 435, 2013
2DG7
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CRYSTAL STRUCTURE OF THE PUTATIVE TRANSCRIPTIONAL REGULATOR SCO0337 FROM STREPTOMYCES COELICOLOR A3(2)
Descriptor:putative transcriptional regulator
Authors:Hayashi, T., Tanaka, Y., Sakai, N., Yao, M., Tamura, T., Tanaka, I.
Deposit date:2006-03-08
Release date:2007-03-13
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Crystal structure of the putative transcriptional regulator SCO0337 from Streptomyces coelicolor A3(2)
To be Published
2DG8
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CRYSTAL STRUCTURE OF THE PUTATIVE TRASNCRIPTIONAL REGULATOR SCO7518 FROM STREPTOMYCES COELICOLOR A3(2)
Descriptor:putative tetR-family transcriptional regulatory protein
Authors:Hayashi, T., Watanabe, N., Sakai, N., Tamura, T., Yao, M., Tanaka, I.
Deposit date:2006-03-08
Release date:2007-03-13
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (2.21 Å)
Cite:Crystal structure of the putative transcriptional regulator SCO7518 from Streptomyces coelicolor A3(2)
To be Published
2Z36
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CRYSTAL STRUCTURE OF CYTOCHROME P450 MOXA FROM NONOMURAEA RECTICATENA (CYP105)
Descriptor:Cytochrome P450 type compactin 3'',4''-hydroxylase, FE (III) ION, PROTOPORPHYRIN IX CONTAINING FE, ...
Authors:Yasutake, Y., Fujii, Y., Fujii, T., Arisawa, A., Tamura, T.
Deposit date:2007-06-02
Release date:2007-08-21
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (2.8 Å)
Cite:Crystal structure of cytochrome P450 MoxA from Nonomuraea recticatena (CYP105)
Biochem.Biophys.Res.Commun., 361, 2007
3AUS
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CRYSTAL STRUCTURE OF BACILLUS MEGATERIUM GLUCOSE DEHYDROGENASE 4 IN LIGAND-FREE FORM
Descriptor:Glucose 1-dehydrogenase 4
Authors:Nishioka, T., Yasutake, Y., Nishiya, Y., Tamura, T.
Deposit date:2011-02-16
Release date:2012-02-22
Last modified:2012-09-19
Method:X-RAY DIFFRACTION (2 Å)
Cite:Structure-guided mutagenesis for the improvement of substrate specificity of Bacillus megaterium glucose 1-dehydrogenase IV
Febs J., 279, 2012
3AUT
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CRYSTAL STRUCTURE OF BACILLUS MEGATERIUM GLUCOSE DEHYDROGENASE 4 IN COMPLEX WITH NADH
Descriptor:Glucose 1-dehydrogenase 4, 1,4-DIHYDRONICOTINAMIDE ADENINE DINUCLEOTIDE
Authors:Nishioka, T., Yasutake, Y., Nishiya, Y., Tamura, T.
Deposit date:2011-02-16
Release date:2012-02-22
Last modified:2012-09-19
Method:X-RAY DIFFRACTION (2 Å)
Cite:Structure-guided mutagenesis for the improvement of substrate specificity of Bacillus megaterium glucose 1-dehydrogenase IV
Febs J., 279, 2012
3AUU
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CRYSTAL STRUCTURE OF BACILLUS MEGATERIUM GLUCOSE DEHYDROGENASE 4 IN COMPLEX WITH D-GLUCOSE
Descriptor:Glucose 1-dehydrogenase 4, BETA-D-GLUCOSE
Authors:Nishioka, T., Yasutake, Y., Nishiya, Y., Tamura, T.
Deposit date:2011-02-16
Release date:2012-02-22
Last modified:2012-09-19
Method:X-RAY DIFFRACTION (2 Å)
Cite:Structure-guided mutagenesis for the improvement of substrate specificity of Bacillus megaterium glucose 1-dehydrogenase IV
Febs J., 279, 2012
3AY6
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CRYSTAL STRUCTURE OF BACILLUS MEGATERIUM GLUCOSE DEHYDROGENASE 4 A258F MUTANT IN COMPLEX WITH NADH AND D-GLUCOSE
Descriptor:Glucose 1-dehydrogenase 4, 1,4-DIHYDRONICOTINAMIDE ADENINE DINUCLEOTIDE, BETA-D-GLUCOSE, ...
Authors:Nishioka, T., Yasutake, Y., Nishiya, Y., Tamura, T.
Deposit date:2011-04-29
Release date:2012-05-23
Last modified:2012-09-19
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Structure-guided mutagenesis for the improvement of substrate specificity of Bacillus megaterium glucose 1-dehydrogenase IV
Febs J., 279, 2012
3AY7
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CRYSTAL STRUCTURE OF BACILLUS MEGATERIUM GLUCOSE DEHYDROGENASE 4 G259A MUTANT
Descriptor:Glucose 1-dehydrogenase 4, CHLORIDE ION
Authors:Nishioka, T., Yasutake, Y., Nishiya, Y., Tamura, T.
Deposit date:2011-04-29
Release date:2012-05-23
Last modified:2012-09-19
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Structure-guided mutagenesis for the improvement of substrate specificity of Bacillus megaterium glucose 1-dehydrogenase IV
Febs J., 279, 2012
3VK2
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CRYSTAL STRUCTURE OF L-METHIONINE GAMMA-LYASE FROM PSEUDOMONAS PUTIDA C116H MUTANT.
Descriptor:Methionine gamma-lyase, SULFATE ION
Authors:Fukumoto, M., Kudou, D., Murano, S., Shiba, T., Sato, D., Tamura, T., Harada, S., Inagaki, K.
Deposit date:2011-11-07
Release date:2012-09-19
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:The Role of Amino Acid Residues in the Active Site of LPseudomonas putida.
Biosci.Biotechnol.Biochem., 76, 2012
3VK3
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CRYSTAL STRUCTURE OF L-METHIONINE GAMMA-LYASE FROM PSEUDOMONAS PUTIDA C116H MUTANT COMPLEXED WITH L-METHIONINE
Descriptor:Methionine gamma-lyase, METHIONINE
Authors:Fukumoto, M., Kudou, D., Murano, S., Shiba, T., Sato, D., Tamura, T., Harada, S., Inagaki, K.
Deposit date:2011-11-07
Release date:2012-09-19
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:The Role of Amino Acid Residues in the Active Site of LPseudomonas putida.
Biosci.Biotechnol.Biochem., 76, 2012
3VK4
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CRYSTAL STRUCTURE OF L-METHIONINE GAMMA-LYASE FROM PSEUDOMONAS PUTIDA C116H MUTANT COMPLEXED WITH L-HOMOCYSTEINE
Descriptor:Methionine gamma-lyase, 2-AMINO-4-MERCAPTO-BUTYRIC ACID
Authors:Fukumoto, M., Kudou, D., Murano, S., Shiba, T., Sato, D., Tamura, T., Harada, S., Inagaki, K.
Deposit date:2011-11-07
Release date:2012-09-19
Method:X-RAY DIFFRACTION (2.61 Å)
Cite:The Role of Amino Acid Residues in the Active Site of LPseudomonas putida.
Biosci.Biotechnol.Biochem., 76, 2012
3VRM
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STRUCTURE OF CYTOCHROME P450 VDH MUTANT T107A WITH BOUND VITAMIN D3
Descriptor:Vitamin D(3) 25-hydroxylase, PROTOPORPHYRIN IX CONTAINING FE, (1S,3Z)-3-[(2E)-2-[(1R,3AR,7AS)-7A-METHYL-1-[(2R)-6-METHYLHEPTAN-2-YL]-2,3,3A,5,6,7-HEXAHYDRO-1H-INDEN-4-YLIDENE]ETHYLIDENE]-4-METHYLIDENE-CYCLOHEXAN-1-OL
Authors:Nishioka, T., Yasutake, Y., Tamura, T.
Deposit date:2012-04-12
Release date:2013-04-17
Last modified:2013-11-27
Method:X-RAY DIFFRACTION (2.57 Å)
Cite:A single mutation at the ferredoxin binding site of p450 vdh enables efficient biocatalytic production of 25-hydroxyvitamin d3.
Chembiochem, 14, 2013
3VTZ
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STRUCTURE OF THERMOPLASMA VOLCANIUM ALDOHEXOSE DEHYDROGENASE
Descriptor:Glucose 1-dehydrogenase
Authors:Yasutake, Y., Nishioka, T., Tamura, T.
Deposit date:2012-06-12
Release date:2012-07-18
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Structure of Thermoplasma volcanium aldohexose dehydrogenase
To be Published
3WEC
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STRUCTURE OF P450 RAUA (CYP1050A1) COMPLEXED WITH A BIOSYNTHETIC INTERMEDIATE OF AURACHIN RE
Descriptor:Cytochrome P450, PROTOPORPHYRIN IX CONTAINING FE, 3-[(2E,6E,9R)-9-hydroxy-3,7,11-trimethyldodeca-2,6,10-trien-1-yl]-2-methylquinolin-4(1H)-one
Authors:Yasutake, Y., Kitagawa, W., Tamura, T.
Deposit date:2013-07-03
Release date:2014-01-01
Method:X-RAY DIFFRACTION (2.19 Å)
Cite:Structure of the quinoline N-hydroxylating cytochrome P450 RauA, an essential enzyme that confers antibiotic activity on aurachin alkaloids
Febs Lett., 588, 2014