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2JK0
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BU of 2jk0 by Molmil
Structural and functional insights into Erwinia carotovora L- asparaginase
Descriptor: ASPARTIC ACID, L-ASPARAGINASE
Authors:Papageorgiou, A.C, Posypanova, G.A, Andersson, C.S, Sokolov, N.N, Krasotkina, J.
Deposit date:2008-05-23
Release date:2008-08-05
Last modified:2023-12-13
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:Structural and Functional Insights Into Erwinia Carotovora L-Asparaginase.
FEBS J., 275, 2008
6ET6
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BU of 6et6 by Molmil
Crystal structure of muramidase from Acinetobacter baumannii AB 5075UW prophage
Descriptor: GLYCEROL, Lysozyme, SULFATE ION
Authors:Boyko, K.M, Nikolaeva, A.Y, Sykilinda, N.N, Shneider, M.M, Miroshnikov, K.A, Popov, V.O.
Deposit date:2017-10-25
Release date:2018-09-05
Last modified:2024-01-17
Method:X-RAY DIFFRACTION (1.2 Å)
Cite:Structure of anAcinetobacterBroad-Range Prophage Endolysin Reveals a C-Terminal alpha-Helix with the Proposed Role in Activity against Live Bacterial Cells.
Viruses, 10, 2018
8C18
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BU of 8c18 by Molmil
Solution structure of carotenoid-binding protein AstaPo1 in complex with astaxanthin
Descriptor: ASTAXANTHIN, Astaxanthin binding fasciclin family protein
Authors:Kornilov, F.D, Savitskaya, A.G, Slonimskiy, Y.B, Goncharuk, S.A, Sluchanko, N.N, Mineev, K.S.
Deposit date:2022-12-20
Release date:2023-04-05
Last modified:2024-06-19
Method:SOLUTION NMR
Cite:Structural basis for the ligand promiscuity of the neofunctionalized, carotenoid-binding fasciclin domain protein AstaP.
Commun Biol, 6, 2023
3L2B
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BU of 3l2b by Molmil
Crystal structure of the CBS and DRTGG domains of the regulatory region of Clostridium perfringens pyrophosphatase complexed with activator, diadenosine tetraphosphate
Descriptor: BIS(ADENOSINE)-5'-TETRAPHOSPHATE, Probable manganase-dependent inorganic pyrophosphatase
Authors:Tuominen, H, Salminen, A, Oksanen, E, Jamsen, J, Heikkila, O, Lehtio, L, Magretova, N.N, Goldman, A, Baykov, A.A, Lahti, R.
Deposit date:2009-12-15
Release date:2010-04-21
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (2.27 Å)
Cite:Crystal Structures of the CBS and DRTGG Domains of the Regulatory Region of Clostridiumperfringens Pyrophosphatase Complexed with the Inhibitor, AMP, and Activator, Diadenosine Tetraphosphate.
J.Mol.Biol., 2010
2QC7
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BU of 2qc7 by Molmil
Crystal structure of the protein-disulfide isomerase related chaperone ERp29
Descriptor: Endoplasmic reticulum protein ERp29
Authors:Barak, N.N, Sevvana, M, Neumann, P, Malesevic, M, Naumann, K, Fischer, G, Sheldrick, G.M, Stubbs, M.T, Ferrari, D.M.
Deposit date:2007-06-19
Release date:2008-06-24
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (2.9 Å)
Cite:Crystal structure and functional analysis of the protein disulfide isomerase-related protein ERp29.
J.Mol.Biol., 385, 2009
5W2F
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BU of 5w2f by Molmil
Crystal Structure of the C-terminal Domain of Human eIF2D at 1.4 A resolution
Descriptor: Eukaryotic translation initiation factor 2D, FORMIC ACID
Authors:Vaidya, A.T, Lomakin, I.B, Joseph, N.N, Dmitriev, S.E, Steitz, T.A.
Deposit date:2017-06-06
Release date:2017-08-02
Last modified:2024-03-13
Method:X-RAY DIFFRACTION (1.4 Å)
Cite:Crystal Structure of the C-terminal Domain of Human eIF2D and Its Implications on Eukaryotic Translation Initiation.
J. Mol. Biol., 429, 2017
113D
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BU of 113d by Molmil
THE STRUCTURE OF GUANOSINE-THYMIDINE MISMATCHES IN B-DNA AT 2.5 ANGSTROMS RESOLUTION
Descriptor: DNA (5'-D(*CP*GP*CP*GP*AP*AP*TP*TP*TP*GP*CP*G)-3')
Authors:Hunter, W.N, Brown, T, Kneale, G, Anand, N.N, Rabinovich, D, Kennard, O.
Deposit date:1993-01-04
Release date:1993-07-15
Last modified:2024-02-07
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:The structure of guanosine-thymidine mismatches in B-DNA at 2.5-A resolution.
J.Biol.Chem., 262, 1987
2F8I
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BU of 2f8i by Molmil
Human transthyretin (TTR) complexed with Benzoxazole
Descriptor: 2-(2,6-DICHLOROPHENYL)-1,3-BENZOXAZOLE-6-CARBOXYLIC ACID, Transthyretin
Authors:Palaninathan, S.K, Mohamedmohaideen, N.N, Sacchettini, J.C, Kelly, J.W.
Deposit date:2005-12-02
Release date:2005-12-20
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (1.541 Å)
Cite:Benzoxazoles as transthyretin amyloid fibril inhibitors: synthesis, evaluation, and mechanism of action
Angew.Chem.Int.Ed.Engl., 42, 2003
4R2W
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BU of 4r2w by Molmil
X-ray structure of uridine phosphorylase from Shewanella oneidensis MR-1 in complex with uridine at 1.6 A resolution
Descriptor: GLYCEROL, SULFATE ION, URIDINE, ...
Authors:Safonova, T.N, Mordkovich, N.N, Manuvera, V.A, Veiko, V.P, Popov, V.O, Polyakov, K.P.
Deposit date:2014-08-13
Release date:2014-12-10
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (1.6 Å)
Cite:High-syn conformation of uridine and asymmetry of the hexameric molecule revealed in the high-resolution structures of Shewanella oneidensis MR-1 uridine phosphorylase in the free form and in complex with uridine.
Acta Crystallogr.,Sect.D, 70, 2014
4R2X
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BU of 4r2x by Molmil
Unique conformation of uridine and asymmetry of the hexameric molecule revealed in the high-resolution structures of Shewanella oneidensis uridine phosphorylase in the free form and in complex with uridine
Descriptor: CHLORIDE ION, GLYCEROL, SULFATE ION, ...
Authors:Safonova, T.N, Mordkovich, N.N, Manuvera, V.A, Veiko, V.P, Popov, V.O, Polyakov, K.M.
Deposit date:2014-08-13
Release date:2014-12-10
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (0.93 Å)
Cite:High-syn conformation of uridine and asymmetry of the hexameric molecule revealed in the high-resolution structures of Shewanella oneidensis MR-1 uridine phosphorylase in the free form and in complex with uridine.
Acta Crystallogr.,Sect.D, 70, 2014
9INK
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BU of 9ink by Molmil
Crystal structure of beta-carotene-binding protein (BBP) from Schistocerca gregaria complexed with beta-carotene
Descriptor: BETA-CAROTENE, Yellow protein of the takeout family
Authors:Boyko, K.M, Varfolomeeva, L.A, Egorkin, N.A, Popov, V.O, Sluchanko, N.N.
Deposit date:2024-07-08
Release date:2024-09-18
Method:X-RAY DIFFRACTION (2.7 Å)
Cite:Crystal structure of the locust beta-carotene-binding protein (BBP) complexed with beta-carotene
To Be Published
1OBW
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BU of 1obw by Molmil
STRUCTURE OF INORGANIC PYROPHOSPHATASE
Descriptor: INORGANIC PYROPHOSPHATASE, MAGNESIUM ION
Authors:Oganessyan, V.Yu, Harutyunyan, E.H, Avaeva, S.M, Oganessyan, N.N, Mather, T, Huber, R.
Deposit date:1996-10-09
Release date:1997-09-04
Last modified:2024-04-03
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Crystal structure of holo inorganic pyrophosphatase from Escherichia coli at 1.9 A resolution. Mechanism of hydrolysis.
Biochemistry, 36, 1997
8ZES
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BU of 8zes by Molmil
Crystal structure of the Wuhan SARS-CoV-2 RBD (333-541) complexed with P2C5 nanobody
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, Nanobody P2C5, ...
Authors:Sluchanko, N.N, Varfolomeeva, L.A, Shcheblyakov, D.V, Logunov, D.Y, Gintsburg, A.L, Popov, V.O, Boyko, K.M.
Deposit date:2024-05-06
Release date:2024-09-04
Last modified:2024-09-18
Method:X-RAY DIFFRACTION (3.7 Å)
Cite:Structural Basis for Evasion of New SARS-CoV-2 Variants from the Potent Virus-Neutralizing Nanobody Targeting the S-Protein Receptor-Binding Domain.
Biochemistry Mosc., 89, 2024
8ZER
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BU of 8zer by Molmil
Crystal structure of the complex of Wuhan SARS-CoV-2 RBD (319-541) with P2C5 nanobody
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, Nanobody P2C5, Spike protein S1, ...
Authors:Sluchanko, N.N, Varfolomeeva, L.A, Shcheblyakov, D.V, Logunov, D.Y, Gintsburg, A.L, Popov, V.O, Boyko, K.M.
Deposit date:2024-05-06
Release date:2024-09-04
Last modified:2024-09-18
Method:X-RAY DIFFRACTION (3.1 Å)
Cite:Structural Basis for Evasion of New SARS-CoV-2 Variants from the Potent Virus-Neutralizing Nanobody Targeting the S-Protein Receptor-Binding Domain.
Biochemistry Mosc., 89, 2024
2KWC
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BU of 2kwc by Molmil
The NMR structure of the autophagy-related protein Atg8
Descriptor: Autophagy-related protein 8
Authors:Kumeta, H, Watanabe, M, Nakatogawa, H, Yamaguchi, M, Ogura, K, Adachi, W, Fujioka, Y, Noda, N.N, Ohsumi, Y, Inagaki, F.
Deposit date:2010-04-05
Release date:2010-05-12
Last modified:2024-05-15
Method:SOLUTION NMR
Cite:The NMR structure of the autophagy-related protein Atg8
J.Biomol.Nmr, 47, 2010
3L31
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BU of 3l31 by Molmil
Crystal structure of the CBS and DRTGG domains of the regulatory region of Clostridium perfringens pyrophosphatase complexed with the inhibitor, AMP
Descriptor: ADENOSINE MONOPHOSPHATE, Probable manganase-dependent inorganic pyrophosphatase
Authors:Tuominen, H, Salminen, A, Oksanen, E, Jamsen, J, Heikkila, O, Lehtio, L, Magretova, N.N, Goldman, A, Baykov, A.A, Lahti, R.
Deposit date:2009-12-16
Release date:2010-04-21
Last modified:2024-03-20
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Crystal Structures of the CBS and DRTGG Domains of the Regulatory Region of Clostridiumperfringens Pyrophosphatase Complexed with the Inhibitor, AMP, and Activator, Diadenosine Tetraphosphate.
J.Mol.Biol., 2010
2LPU
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BU of 2lpu by Molmil
Solution structures of KmAtg10
Descriptor: KmAtg10
Authors:Yamaguchi, M, Noda, N.N, Yamamoto, H, Shima, T, Kumeta, H, Kobashigawa, Y, Akada, R, Ohsumi, Y, Inagaki, F.
Deposit date:2012-02-19
Release date:2012-08-01
Last modified:2024-05-15
Method:SOLUTION NMR
Cite:Structural insights into atg10-mediated formation of the autophagy-essential atg12-atg5 conjugate
Structure, 20, 2012
3MMP
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BU of 3mmp by Molmil
Structure of the Qb replicase, an RNA-dependent RNA polymerase consisting of viral and host proteins
Descriptor: (2S)-1-[3-{[(2R)-2-hydroxypropyl]oxy}-2,2-bis({[(2R)-2-hydroxypropyl]oxy}methyl)propoxy]propan-2-ol, Elongation factor Tu 2, Elongation factor Ts, ...
Authors:Kidmose, R.T, Vasiliev, N.N, Chetverin, A.B, Knudsen, C.R, Andersen, G.R.
Deposit date:2010-04-20
Release date:2010-06-09
Last modified:2023-09-06
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:Structure of the Qbeta replicase, an RNA-dependent RNA polymerase consisting of viral and host proteins.
Proc.Natl.Acad.Sci.USA, 107, 2010
8QPT
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BU of 8qpt by Molmil
Crystal structure of pyrophosphatase from Ogataea parapolymorpha
Descriptor: GLYCEROL, MAGNESIUM ION, inorganic diphosphatase
Authors:Matyuta, I.O, Rodina, E.V, Vorobyeva, N.N, Kurilova, S.A, Bezpalaya, E.Y, Boyko, K.M.
Deposit date:2023-10-03
Release date:2024-09-04
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:The crystal structure of yeast mitochondrial type pyrophosphatase provides a model to study pathological mutations in its human ortholog.
Biochem.Biophys.Res.Commun., 738, 2024
3CBR
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BU of 3cbr by Molmil
Crystal structure of human Transthyretin (TTR) at pH3.5
Descriptor: Transthyretin
Authors:Mohamedmohaideen, N.N, Palaninathan, S.K, Snee, W.C, Kelly, J.W, C Sacchettini, J.
Deposit date:2008-02-22
Release date:2008-08-12
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:Structural insight into pH-induced conformational changes within the native human transthyretin tetramer.
J.Mol.Biol., 382, 2008
3GS4
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BU of 3gs4 by Molmil
Human transthyretin (TTR) complexed with 3-(9H-fluoren-9-ylideneaminooxy)propanoic acid (inhibitor 15)
Descriptor: 3-[(9H-fluoren-9-ylideneamino)oxy]propanoic acid, Transthyretin
Authors:Mohamedmohaideen, N.N, Palaninathan, S.K, Orlandini, E, Sacchettini, J.C.
Deposit date:2009-03-26
Release date:2009-07-28
Last modified:2023-09-06
Method:X-RAY DIFFRACTION (1.78 Å)
Cite:Novel transthyretin amyloid fibril formation inhibitors: synthesis, biological evaluation, and X-ray structural analysis.
Plos One, 4, 2009
3GLZ
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BU of 3glz by Molmil
Human Transthyretin (TTR) complexed with(E)-3-(2-(trifluoromethyl)benzylideneaminooxy)propanoic acid (inhibitor 11)
Descriptor: 3-[({(1E)-[2-(trifluoromethyl)phenyl]methylidene}amino)oxy]propanoic acid, Transthyretin
Authors:Mohamedmohaideen, N.N, Palaninathan, S.K, Orlandini, E, Sacchettini, J.C.
Deposit date:2009-03-12
Release date:2009-07-28
Last modified:2023-09-06
Method:X-RAY DIFFRACTION (1.78 Å)
Cite:Novel transthyretin amyloid fibril formation inhibitors: synthesis, biological evaluation, and X-ray structural analysis
Plos One, 4, 2009
7QIK
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BU of 7qik by Molmil
SARS-CoV-2 Nucleocapsid phosphopeptide 193-200 bound to human 14-3-3 sigma
Descriptor: 14-3-3 protein sigma, 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, BROMIDE ION, ...
Authors:Sluchanko, N.N, Tugaeva, K.V, Smith, J.L.R, Antson, A.A.
Deposit date:2021-12-15
Release date:2021-12-29
Last modified:2024-01-31
Method:X-RAY DIFFRACTION (2.01 Å)
Cite:SARS-CoV-2 Nucleocapsid phosphopeptide 193-200 bound to human 14-3-3 sigma
To Be Published
7QIP
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BU of 7qip by Molmil
SARS-CoV-2 Nucleocapsid phosphopeptide 201-210 bound to human 14-3-3 sigma
Descriptor: 14-3-3 protein sigma, ARG-GLY-TPO-SER-PRO-ALA-ARG-MET, CHLORIDE ION
Authors:Sluchanko, N.N, Tugaeva, K.V, Smith, J.L.R, Antson, A.A.
Deposit date:2021-12-15
Release date:2021-12-29
Last modified:2024-01-31
Method:X-RAY DIFFRACTION (2.65 Å)
Cite:SARS-CoV-2 Nucleocapsid phosphopeptide 193-200 bound to human 14-3-3 sigma
To Be Published
1E52
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BU of 1e52 by Molmil
Solution structure of Escherichia coli UvrB C-terminal domain
Descriptor: EXCINUCLEASE ABC SUBUNIT
Authors:Alexandrovich, A.A, Kelly, G.G, Frenkiel, T.A, Moolenaar, G.F, Goosen, N.N, Sanderson, M.R, Lane, A.N.
Deposit date:2000-07-14
Release date:2001-07-12
Last modified:2024-06-19
Method:SOLUTION NMR
Cite:Solution Structure, Hydrodynamics and Thermodynamics of the Uvrb C-Terminal Domain.
J.Biomol.Struct.Dyn., 19, 2001

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