Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help
Search by PDB author
4CMV
DownloadVisualize
BU of 4cmv by Molmil
Crystal structure of Rv3378c
Descriptor: CITRIC ACID, DITERPENE SYNTHASE, MERCURY (II) ION
Authors:Layre, E, Lee, H.J, Young, D.C, Martinot, A.J, Buter, J, Minnaard, A.J, Annand, J.W, Fortune, S.M, Snider, B.B, Matsunaga, I, Rubin, E.J, Alber, T, Moody, D.B.
Deposit date:2014-01-18
Release date:2014-02-19
Last modified:2014-03-12
Method:X-RAY DIFFRACTION (2.307 Å)
Cite:Molecular Profiling of Mycobacterium Tuberculosis Identifies Tuberculosinyl Nucleoside Products of the Virulence-Associated Enzyme Rv3378C.
Proc.Natl.Acad.Sci.USA, 111, 2014
4CMX
DownloadVisualize
BU of 4cmx by Molmil
Crystal structure of Rv3378c
Descriptor: 1,2-ETHANEDIOL, BENZENE HEXACARBOXYLIC ACID, DI(HYDROXYETHYL)ETHER, ...
Authors:Layre, E, Lee, H.J, Young, D.C, Martinot, A.J, Buter, J, Minnaard, A.J, Annand, J.W, Fortune, S.M, Snider, B.B, Matsunaga, I, Rubin, E.J, Alber, T, Moody, D.B.
Deposit date:2014-01-18
Release date:2014-02-19
Last modified:2023-12-20
Method:X-RAY DIFFRACTION (2.36 Å)
Cite:Molecular Profiling of Mycobacterium Tuberculosis Identifies Tuberculosinyl Nucleoside Products of the Virulence-Associated Enzyme Rv3378C.
Proc.Natl.Acad.Sci.USA, 111, 2014
4CMW
DownloadVisualize
BU of 4cmw by Molmil
Crystal structure of Rv3378c
Descriptor: 1,2-ETHANEDIOL, CITRIC ACID, DI(HYDROXYETHYL)ETHER, ...
Authors:Layre, E, Lee, H.J, Young, D.C, Martinot, A.J, Buter, J, Minnaard, A.J, Annand, J.W, Fortune, S.M, Snider, B.B, Matsunaga, I, Rubin, E.J, Alber, T, Moody, D.B.
Deposit date:2014-01-18
Release date:2014-02-19
Last modified:2023-12-20
Method:X-RAY DIFFRACTION (2.209 Å)
Cite:Molecular Profiling of Mycobacterium Tuberculosis Identifies Tuberculosinyl Nucleoside Products of the Virulence-Associated Enzyme Rv3378C.
Proc.Natl.Acad.Sci.USA, 111, 2014
7BPU
DownloadVisualize
BU of 7bpu by Molmil
Structural and mechanistic insights into the biosynthesis of Digeranylgeranylglyceryl phosphate synthase in membranes
Descriptor: Digeranylgeranylglyceryl phosphate synthase, PHOSPHATE ION
Authors:Cheng, W, Ren, S.
Deposit date:2020-03-23
Release date:2021-04-14
Last modified:2022-08-17
Method:X-RAY DIFFRACTION (3.32 Å)
Cite:Structural and Functional Insights into an Archaeal Lipid Synthase
Cell Rep, 33, 2020
6M31
DownloadVisualize
BU of 6m31 by Molmil
Structural and Functional Insights into an Archaeal Lipid Synthase
Descriptor: Digeranylgeranylglyceryl phosphate synthase, LAURYL DIMETHYLAMINE-N-OXIDE, MAGNESIUM ION, ...
Authors:Ren, S, Cheng, W.
Deposit date:2020-03-02
Release date:2021-02-03
Last modified:2022-08-17
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Structural and Functional Insights into an Archaeal Lipid Synthase
Cell Rep, 33, 2020
5JAW
DownloadVisualize
BU of 5jaw by Molmil
Structure of a beta galactosidase with inhibitor
Descriptor: (1S,2S,3S,4S,5R,6R)-5-amino-6-(hydroxymethyl)cyclohexane-1,2,3,4-tetrol, ACETATE ION, Beta-galactosidase, ...
Authors:Offen, W, Davies, G.
Deposit date:2016-04-12
Release date:2017-05-10
Last modified:2024-01-10
Method:X-RAY DIFFRACTION (1.6 Å)
Cite:Towards broad spectrum activity-based glycosidase probes: synthesis and evaluation of deoxygenated cyclophellitol aziridines.
Chem. Commun. (Camb.), 53, 2017
6CUH
DownloadVisualize
BU of 6cuh by Molmil
Crystal structure of the unliganded BC8B TCR
Descriptor: 1,2-ETHANEDIOL, ACETATE ION, DI(HYDROXYETHYL)ETHER, ...
Authors:Shahine, A.E, Rossjohn, J.
Deposit date:2018-03-26
Release date:2019-01-16
Last modified:2023-10-04
Method:X-RAY DIFFRACTION (2.01 Å)
Cite:A T-cell receptor escape channel allows broad T-cell response to CD1b and membrane phospholipids.
Nat Commun, 10, 2019
6CUG
DownloadVisualize
BU of 6cug by Molmil
Crystal structure of BC8B TCR-CD1b-PC complex
Descriptor: (2S)-3-(hexadecanoyloxy)-2-[(9Z)-octadec-9-enoyloxy]propyl 2-(trimethylammonio)ethyl phosphate, 2-acetamido-2-deoxy-beta-D-glucopyranose, Beta-2-microglobulin, ...
Authors:Shahine, A.E, Rossjohn, J.
Deposit date:2018-03-26
Release date:2019-01-16
Last modified:2023-10-04
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:A T-cell receptor escape channel allows broad T-cell response to CD1b and membrane phospholipids.
Nat Commun, 10, 2019
6D64
DownloadVisualize
BU of 6d64 by Molmil
Crystal Structure of Human CD1b in Complex with POPC
Descriptor: (2S)-3-(hexadecanoyloxy)-2-[(9Z)-octadec-9-enoyloxy]propyl 2-(trimethylammonio)ethyl phosphate, 1,2-ETHANEDIOL, Beta-2-microglobulin, ...
Authors:Shahine, A.E, Rossjohn, J.
Deposit date:2018-04-20
Release date:2019-01-16
Last modified:2023-10-04
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:A T-cell receptor escape channel allows broad T-cell response to CD1b and membrane phospholipids.
Nat Commun, 10, 2019
7MXF
DownloadVisualize
BU of 7mxf by Molmil
CD1c with antigen analogue 2
Descriptor: (2S)-2,3-dihydroxypropyl hexadecanoate, 2,6-anhydro-1-deoxy-1-[(S)-hydroxy{[(4R,8S,12R,16R,20S)-4,8,12,16,20-pentamethylheptacosyl]oxy}phosphoryl]-D-glycero-D-galacto-heptitol, 2-[N-CYCLOHEXYLAMINO]ETHANE SULFONIC ACID, ...
Authors:Cao, T.P, Shahine, A, Rossjohn, J.
Deposit date:2021-05-19
Release date:2021-11-17
Last modified:2023-10-18
Method:X-RAY DIFFRACTION (2 Å)
Cite:Rational design of a hydrolysis-resistant mycobacterial phosphoglycolipid antigen presented by CD1c to T cells.
J.Biol.Chem., 297, 2021
7MXH
DownloadVisualize
BU of 7mxh by Molmil
CD1c with antigen analogue 3
Descriptor: (2S)-2,3-dihydroxypropyl hexadecanoate, 2,6-anhydro-1-deoxy-1,1-difluoro-1-[(R)-hydroxy{[(4S,8S,12S,16S,20S)-4,8,12,16,20-pentamethylheptacosyl]oxy}phosphoryl]-D-glycero-D-galacto-heptitol, 2-acetamido-2-deoxy-beta-D-glucopyranose, ...
Authors:Cao, T.P, Shahine, A, Rossjohn, J.
Deposit date:2021-05-19
Release date:2021-11-17
Last modified:2023-10-18
Method:X-RAY DIFFRACTION (2.11 Å)
Cite:Rational design of a hydrolysis-resistant mycobacterial phosphoglycolipid antigen presented by CD1c to T cells.
J.Biol.Chem., 297, 2021
7MX4
DownloadVisualize
BU of 7mx4 by Molmil
CD1c with antigen analogue 1
Descriptor: (2S)-2,3-dihydroxypropyl hexadecanoate, (4S,8R,12S,16S,20S)-4,8,12,16,20-pentamethylheptacosyl (1R,2S,3S,4R,5R)-2,3,4-trihydroxy-5-(hydroxymethyl)cyclohexyl hydrogen (R)-phosphate, 2-[N-CYCLOHEXYLAMINO]ETHANE SULFONIC ACID, ...
Authors:Cao, T.P, Shahine, A, Rossjohn, J.
Deposit date:2021-05-18
Release date:2021-11-17
Last modified:2023-10-18
Method:X-RAY DIFFRACTION (1.73 Å)
Cite:Rational design of a hydrolysis-resistant mycobacterial phosphoglycolipid antigen presented by CD1c to T cells.
J.Biol.Chem., 297, 2021
8HB5
DownloadVisualize
BU of 8hb5 by Molmil
Crystal structure of Mincle in complex with HD-275
Descriptor: (2~{R},3~{R},4~{S},5~{S},6~{R})-6-(methoxymethyl)oxane-2,3,4,5-tetrol, C-type lectin domain family 4 member E, CALCIUM ION
Authors:Ishizuka, S, Nagae, M, Yamasaki, S.
Deposit date:2022-10-27
Release date:2023-08-09
Method:X-RAY DIFFRACTION (2.6 Å)
Cite:PGL-III, a Rare Intermediate of Mycobacterium leprae Phenolic Glycolipid Biosynthesis, Is a Potent Mincle Ligand.
Acs Cent.Sci., 9, 2023
8H4V
DownloadVisualize
BU of 8h4v by Molmil
Mincle CRD complex with PGL trisaccharide
Descriptor: (2~{R},3~{R},4~{S},5~{S},6~{R})-6-(methoxymethyl)oxane-2,3,4,5-tetrol-(1-4)-6-deoxy-2,3-di-O-methyl-alpha-L-mannopyranose-(1-2)-3-O-methyl-alpha-L-rhamnopyranose, C-type lectin domain family 4 member E, CALCIUM ION
Authors:Ishizuka, S, Nagae, M, Yamasaki, S.
Deposit date:2022-10-11
Release date:2023-08-09
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:PGL-III, a Rare Intermediate of Mycobacterium leprae Phenolic Glycolipid Biosynthesis, Is a Potent Mincle Ligand.
Acs Cent.Sci., 9, 2023
8GLE
DownloadVisualize
BU of 8gle by Molmil
Crystal Structure of Human CD1b in Complex with Lysosulfatide
Descriptor: (2S,3R,4E)-2-amino-3-hydroxyoctadec-4-en-1-yl 3-O-sulfo-beta-D-galactopyranoside, 1,2-ETHANEDIOL, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-[alpha-L-fucopyranose-(1-6)]2-acetamido-2-deoxy-beta-D-glucopyranose, ...
Authors:Shahine, A.
Deposit date:2023-03-22
Release date:2023-09-20
Method:X-RAY DIFFRACTION (1.85 Å)
Cite:CD1 lipidomes reveal lipid-binding motifs and size-based antigen-display mechanisms
Cell(Cambridge,Mass.), 186, 2023
8GLF
DownloadVisualize
BU of 8glf by Molmil
Crystal Structure of Human CD1b in Complex with Sphingomyelin C34:2
Descriptor: 1,2-ETHANEDIOL, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, Beta-2-microglobulin, ...
Authors:Shahine, A.
Deposit date:2023-03-22
Release date:2023-09-20
Method:X-RAY DIFFRACTION (2 Å)
Cite:CD1 lipidomes reveal lipid-binding motifs and size-based antigen-display mechanisms
Cell(Cambridge,Mass.), 186, 2023
8GLG
DownloadVisualize
BU of 8glg by Molmil
Crystal Structure of Human CD1b in Complex with Phosphatidylethanolamine C34:1
Descriptor: (1S)-2-{[(S)-(2-aminoethoxy)(hydroxy)phosphoryl]oxy}-1-[(octadecanoyloxy)methyl]ethyl (9Z)-octadec-9-enoate, 1,2-ETHANEDIOL, Beta-2-microglobulin, ...
Authors:Shahine, A.
Deposit date:2023-03-22
Release date:2023-09-20
Method:X-RAY DIFFRACTION (1.6 Å)
Cite:CD1 lipidomes reveal lipid-binding motifs and size-based antigen-display mechanisms
Cell(Cambridge,Mass.), 186, 2023
8GLI
DownloadVisualize
BU of 8gli by Molmil
Crystal Structure of Human CD1b in Complex with Mycobacterial C85-GMM
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, 6-O-[(2R,3R)-3-hydroxy-20-{(1R,2S)-2-[(17R,18R)-17-methoxy-18-methyldotriacontyl]cyclopropyl}-2-pentadecylicosanoyl]-alpha-L-galactopyranose, Beta-2-microglobulin, ...
Authors:Balaji, G, Rossjohn, J, Shahine, A.
Deposit date:2023-03-22
Release date:2023-09-20
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:CD1 lipidomes reveal lipid-binding motifs and size-based antigen-display mechanisms
Cell(Cambridge,Mass.), 186, 2023
8GLH
DownloadVisualize
BU of 8glh by Molmil
Crystal Structure of Human CD1b in Complex with Endogenous PC C40:5
Descriptor: (11E)-hexadec-11-enoic acid, 1,2-ETHANEDIOL, Beta-2-microglobulin, ...
Authors:Farquhar, R, Rossjohn, J, Shahine, A.
Deposit date:2023-03-22
Release date:2023-09-20
Method:X-RAY DIFFRACTION (1.83 Å)
Cite:CD1 lipidomes reveal lipid-binding motifs and size-based antigen-display mechanisms
Cell(Cambridge,Mass.), 186, 2023

218853

PDB entries from 2024-04-24

PDB statisticsPDBj update infoContact PDBjnumon