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1YBZ
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BU of 1ybz by Molmil
Conserved hypothetical protein from Pyrococcus furiosus Pfu-1581948-001
Descriptor: UNKNOWN ATOM OR ION, chorismate mutase
Authors:Lee, D, Chen, L, Nguyen, D, Dillard, B.D, Tempel, W, Habel, J, Zhou, W, Chang, S.-H, Kelley, L.-L.C, Liu, Z.-J, Lin, D, Zhang, H, Praissman, J, Bridger, S, Eneh, J.C, Hopkins, R.C, Jenney Jr, F.E, Lee, H.-S, Li, T, Poole II, F.L, Shah, C, Sugar, F.J, Adams, M.W.W, Rose, J.P, Wang, B.-C, Southeast Collaboratory for Structural Genomics (SECSG)
Deposit date:2004-12-21
Release date:2005-02-01
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (1.82 Å)
Cite:Conserved hypothetical protein from Pyrococcus furiosus Pfu-1581948-001
To be published
2H8W
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BU of 2h8w by Molmil
Solution structure of ribosomal protein L11
Descriptor: 50S ribosomal protein L11
Authors:Lee, D, Walsh, J.D, Yu, P, Choli-Papadopoulou, T, Krueger, S, Draper, D, Wang, Y.-X.
Deposit date:2006-06-08
Release date:2007-02-06
Last modified:2022-03-09
Method:SOLUTION NMR
Cite:The Structure of Free L11 and Functional Dynamics of L11 in Free, L11-rRNA(58 nt) Binary and L11-rRNA(58 nt)-thiostrepton Ternary Complexes.
J.Mol.Biol., 367, 2007
2P01
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BU of 2p01 by Molmil
The structure of receptor-associated protein(RAP)
Descriptor: Alpha-2-macroglobulin receptor-associated protein
Authors:Lee, D, Walsh, J.D, Migliorini, M, Yu, P, Cai, T, Schwieters, C.D, Krueger, S, Strickland, D.K, Wang, Y.X.
Deposit date:2007-02-28
Release date:2007-08-21
Last modified:2022-03-16
Method:SOLUTION NMR
Cite:The structure of receptor-associated protein (RAP).
Protein Sci., 16, 2007
2P03
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BU of 2p03 by Molmil
The structure of receptor-associated protein(RAP)
Descriptor: Alpha-2-macroglobulin receptor-associated protein
Authors:Lee, D, Walsh, J.D, Migliorini, M, Yu, P, Cai, T, Schwieters, C.D, Krueger, S, Strickland, D.K, Wang, Y.X.
Deposit date:2007-02-28
Release date:2007-08-21
Last modified:2022-03-16
Method:SOLUTION NMR
Cite:The structure of receptor-associated protein (RAP).
Protein Sci., 16, 2007
1LS8
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BU of 1ls8 by Molmil
NMR structure of the unliganded Bombyx mori pheromone-binding protein at physiological pH
Descriptor: pheromone binding protein
Authors:Lee, D, Damberger, F, Horst, R, Guntert, P, Leal, W.S, Wuthrich, K.
Deposit date:2002-05-17
Release date:2002-11-20
Last modified:2022-02-23
Method:SOLUTION NMR
Cite:NMR structure of the unliganded Bombyx mori pheromone-binding protein at physiological pH
FEBS Lett., 531, 2002
2E35
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BU of 2e35 by Molmil
the minimized average structure of L11 with rg refinement
Descriptor: 50S ribosomal protein L11
Authors:Lee, D, Walsh, J.D, Yu, P, Markus, M.A, Choli-Papadopoulous, T, Schwieters, C.D, Krueger, S, Draper, D.E, Wang, Y.X.
Deposit date:2006-11-20
Release date:2007-06-19
Last modified:2022-03-09
Method:SOLUTION NMR
Cite:The structure of free L11 and functional dynamics of L11 in free, L11-rRNA(58 nt) binary and L11-rRNA(58 nt)-thiostrepton ternary complexes
J.Mol.Biol., 367, 2007
2E36
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BU of 2e36 by Molmil
L11 with SANS refinement
Descriptor: 50S ribosomal protein L11
Authors:Lee, D, Walsh, J.D, Yu, P, Markus, M.A, Choli-Papadopoulous, T, Schwieters, C.D, Krueger, S, Draper, D.E, Wang, Y.X.
Deposit date:2006-11-20
Release date:2007-06-19
Last modified:2022-03-09
Method:SOLUTION NMR
Cite:The structure of free L11 and functional dynamics of L11 in free, L11-rRNA(58 nt) binary and L11-rRNA(58 nt)-thiostrepton ternary complexes
J.Mol.Biol., 367, 2007
2E34
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BU of 2e34 by Molmil
L11 structure with RDC and RG refinement
Descriptor: 50S ribosomal protein L11
Authors:Lee, D, Walsh, J.D, Yu, P, Markus, M.A, Choli-Papadopoulous, T, Schwieters, C.D, Krueger, S, Draper, D.E, Wang, Y.X.
Deposit date:2006-11-20
Release date:2007-06-19
Last modified:2022-03-09
Method:SOLUTION NMR
Cite:The structure of free L11 and functional dynamics of L11 in free, L11-rRNA(58 nt) binary and L11-rRNA(58 nt)-thiostrepton ternary complexes
J.Mol.Biol., 367, 2007
2FTU
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BU of 2ftu by Molmil
solution structure of domain 3 of RAP
Descriptor: Alpha-2-macroglobulin receptor-associated protein, domain 3
Authors:Lee, D, Walsh, J.D, Wang, Y.-X.
Deposit date:2006-01-24
Release date:2006-05-09
Last modified:2022-03-09
Method:SOLUTION NMR
Cite:RAP uses a histidine switch to regulate its interaction with LRP in the ER and Golgi.
Mol.Cell, 22, 2006
5ZAI
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BU of 5zai by Molmil
Crystal structure of 3-Hydroxypropionyl-CoA dehydratase from Metallosphaera sedula
Descriptor: 1,2-ETHANEDIOL, 3-hydroxypropionyl-coenzyme A dehydratase, COENZYME A, ...
Authors:Lee, D, Kim, K.J.
Deposit date:2018-02-07
Release date:2018-08-01
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Structural Insight into Substrate Specificity of 3-Hydroxypropionyl-Coenzyme A Dehydratase from Metallosphaera sedula
Sci Rep, 8, 2018
6IHD
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BU of 6ihd by Molmil
Crystal structure of Malate dehydrogenase from Metallosphaera sedula
Descriptor: 2-ETHOXYETHANOL, Malate dehydrogenase, NICOTINAMIDE-ADENINE-DINUCLEOTIDE
Authors:Lee, D, Kim, K.J.
Deposit date:2018-09-29
Release date:2019-02-06
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Crystal structure and biochemical characterization of malate dehydrogenase from Metallosphaera sedula
Biochem. Biophys. Res. Commun., 509, 2019
6IHE
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BU of 6ihe by Molmil
Crystal structure of Malate dehydrogenase from Metallosphaera sedula
Descriptor: 1,2-ETHANEDIOL, D-MALATE, DI(HYDROXYETHYL)ETHER, ...
Authors:Lee, D, Kim, K.J.
Deposit date:2018-09-29
Release date:2019-02-06
Last modified:2020-09-09
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Crystal structure and biochemical characterization of malate dehydrogenase from Metallosphaera sedula
Biochem. Biophys. Res. Commun., 509, 2019
6JX2
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BU of 6jx2 by Molmil
Crystal structure of Ketol-acid reductoisomerase from Corynebacterium glutamicum
Descriptor: 1,2-ETHANEDIOL, Ketol-acid reductoisomerase (NADP(+)), MAGNESIUM ION, ...
Authors:Lee, D, Hong, J, Kim, K.-J.
Deposit date:2019-04-22
Release date:2019-08-07
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (2.6 Å)
Cite:Crystal Structure and Biochemical Characterization of Ketol-Acid Reductoisomerase fromCorynebacterium glutamicum.
J.Agric.Food Chem., 67, 2019
1EJP
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BU of 1ejp by Molmil
SOLUTION STRUCTURE OF THE SYNDECAN-4 WHOLE CYTOPLASMIC DOMAIN
Descriptor: SYNDECAN-4
Authors:Lee, D, Oh, E.S, Woods, A, Couchman, J.R, Lee, W.
Deposit date:2000-03-03
Release date:2001-09-19
Last modified:2022-02-16
Method:SOLUTION NMR
Cite:Solution structure of the dimeric cytoplasmic domain of syndecan-4.
Biochemistry, 40, 2001
2MWH
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BU of 2mwh by Molmil
NMR solution structure of ligand-free OAA
Descriptor: Anti-HIV lectin OAA
Authors:Lee, D, Carneiro, M.G, Koharudin, L.M, Griesinger, C, Gronenborn, A.M, Ban, D, Sabo, T, Trigo-Mourino, P, Mazur, A.
Deposit date:2014-11-10
Release date:2015-04-22
Last modified:2023-06-14
Method:SOLUTION NMR
Cite:Sampling of Glycan-Bound Conformers by the Anti-HIV Lectin Oscillatoria agardhii agglutinin in the Absence of Sugar.
Angew.Chem.Int.Ed.Engl., 54, 2015
6KGZ
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BU of 6kgz by Molmil
bacterial cystathionine gamma-lyase MccB of Staphylococcus aureus
Descriptor: 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, Cystathionine gamma-lyase
Authors:Ha, N.-C, Lee, D.
Deposit date:2019-07-12
Release date:2020-03-25
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Crystal Structure of Bacterial Cystathionine Gamma-Lyase in The Cysteine Biosynthesis Pathway of Staphylococcus aureus
Crystals, 9, 2019
6KHQ
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BU of 6khq by Molmil
bacterial cystathionine gamma-lyase MccB of Staphylococcus aureus with cofactor PLP
Descriptor: Cystathionine gamma lyase
Authors:Ha, N.-C, Lee, D.
Deposit date:2019-07-16
Release date:2020-03-25
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Crystal Structure of Bacterial Cystathionine Gamma-Lyase in The Cysteine Biosynthesis Pathway of Staphylococcus aureus
Crystals, 9, 2019
4UN2
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BU of 4un2 by Molmil
Crystal structure of the UBA domain of Dsk2 in complex with Ubiquitin
Descriptor: UBIQUITIN, UBIQUITIN DOMAIN-CONTAINING PROTEIN DSK2
Authors:Michielssens, S, Peters, J.H, Ban, D, Pratihar, S, Seeliger, D, Sharma, M, Giller, K, Sabo, T.M, Becker, S, Lee, D, Griesinger, C, de Groot, B.L.
Deposit date:2014-05-23
Release date:2014-08-27
Last modified:2024-01-10
Method:X-RAY DIFFRACTION (1.51 Å)
Cite:A Designed Conformational Shift to Control Protein Binding Specificity.
Angew.Chem.Int.Ed.Engl., 53, 2014
2FZF
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BU of 2fzf by Molmil
Hypothetical Protein Pfu-1136390-001 From Pyrococcus furiosus
Descriptor: hypothetical protein
Authors:Fu, Z.-Q, Liu, Z.-J, Lee, D, Kelley, L, Chen, L, Tempel, W, Shah, N, Horanyi, P, Lee, H.S, Habel, J, Dillard, B.D, Nguyen, D, Chang, S.-H, Zhang, H, Chang, J, Sugar, F.J, Poole, F.L, Jenney Jr, F.E, Adams, M.W.W, Rose, J.P, Wang, B.-C, Southeast Collaboratory for Structural Genomics (SECSG)
Deposit date:2006-02-09
Release date:2006-02-21
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (2.7 Å)
Cite:Hypothetical Protein Pfu-1136390-001 From Pyrococcus furiosus
To be published
6NUI
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BU of 6nui by Molmil
Human Guanylate Kinase
Descriptor: Guanylate kinase
Authors:Sabo, T.M, Khan, N, Ban, D, Trigo-Mourino, P, Carneiro, M.G, Trent, J.O, Konrad, M, Lee, D.
Deposit date:2019-02-01
Release date:2019-06-26
Last modified:2019-08-14
Method:SOLUTION NMR
Cite:Solution structure and functional investigation of human guanylate kinase reveals allosteric networking and a crucial role for the enzyme in cancer.
J.Biol.Chem., 294, 2019
1XG7
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BU of 1xg7 by Molmil
Conserved hypothetical protein Pfu-877259-001 from Pyrococcus furiosus
Descriptor: hypothetical protein
Authors:Chang, J, Zhao, M, Horanyi, P, Xu, H, Yang, H, Liu, Z.-J, Chen, L, Zhou, W, Habel, J, Tempel, W, Lee, D, Lin, D, Chang, S.-H, Eneh, J.C, Hopkins, R.C, Jenney Jr, F.E, Lee, H.-S, Li, T, Poole II, F.L, Shah, C, Sugar, F.J, Chen, C.-Y, Arendall III, W.B, Richardson, J.S, Richardson, D.C, Rose, J.P, Adams, M.W.W, Wang, B.-C, Southeast Collaboratory for Structural Genomics (SECSG)
Deposit date:2004-09-16
Release date:2004-11-23
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (1.88 Å)
Cite:Conserved hypothetical protein Pfu-877259-001 from Pyrococcus furiosus
To be published
1XI3
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BU of 1xi3 by Molmil
Thiamine phosphate pyrophosphorylase from Pyrococcus furiosus Pfu-1255191-001
Descriptor: NICKEL (II) ION, SULFATE ION, Thiamine phosphate pyrophosphorylase, ...
Authors:Zhou, W, Chen, L, Tempel, W, Liu, Z.-J, Habel, J, Lee, D, Lin, D, Chang, S.-H, Dillard, B.D, Eneh, J.C, Hopkins, R.C, Jenney Jr, F.E, Kelley, L.-L.C, Lee, H.-S, Li, T, Poole II, F.L, Shah, C, Sugar, F.J, Arendall III, W.B, Richardson, J.S, Richardson, D.C, Rose, J.P, Adams, M.W.W, Wang, B.-C, Southeast Collaboratory for Structural Genomics (SECSG)
Deposit date:2004-09-21
Release date:2004-09-28
Last modified:2023-08-23
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:Thiamine phosphate pyrophosphorylase from Pyrococcus furiosus Pfu-1255191-001
To be published
1XI9
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BU of 1xi9 by Molmil
Alanine aminotransferase from Pyrococcus furiosus Pfu-1397077-001
Descriptor: PYRIDOXAL-5'-PHOSPHATE, putative transaminase
Authors:Zhou, W, Tempel, W, Shah, A, Chen, L, Liu, Z.-J, Lee, D, Lin, D, Chang, S.-H, Brereton, P.S, Izumi, M, Jenney Jr, F.E, Lee, H.-S, Poole II, F.L, Shah, C, Sugar, F.J, Arendall III, W.B, Richardson, J.S, Richardson, D.C, Rose, J.P, Adams, M.W.W, Wang, B.-C, Southeast Collaboratory for Structural Genomics (SECSG)
Deposit date:2004-09-21
Release date:2004-11-23
Last modified:2023-08-23
Method:X-RAY DIFFRACTION (2.33 Å)
Cite:Alanine aminotransferase from Pyrococcus furiosus Pfu-1397077-001
To be published
1XX7
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BU of 1xx7 by Molmil
Conserved hypothetical protein from Pyrococcus furiosus Pfu-403030-001
Descriptor: NICKEL (II) ION, UNKNOWN ATOM OR ION, oxetanocin-like protein
Authors:Chen, L, Tempel, W, Habel, J, Zhou, W, Nguyen, D, Chang, S.-H, Lee, D, Kelley, L.-L.C, Dillard, B.D, Liu, Z.-J, Bridger, S, Eneh, J.C, Hopkins, R.C, Jenney Jr, F.E, Lee, H.-S, Li, T, Poole II, F.L, Shah, C, Sugar, F.J, Adams, M.W.W, Arendall III, W.B, Richardson, J.S, Richardson, D.C, Rose, J.P, Wang, B.-C, Southeast Collaboratory for Structural Genomics (SECSG)
Deposit date:2004-11-04
Release date:2004-12-28
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (2.261 Å)
Cite:Conserved hypothetical protein from Pyrococcus furiosus Pfu-403030-001
To be published
2PK8
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BU of 2pk8 by Molmil
Crystal structure of an uncharacterized protein PF0899 from Pyrococcus furiosus
Descriptor: GOLD (I) CYANIDE ION, Uncharacterized protein PF0899
Authors:Liu, Z.J, Tempel, W, Chen, L, Shah, A, Lee, D, Clancy-Kelley, L.L, Dillard, B.D, Rose, J.P, Sugar, F.J, Jenny Jr, F.E, Lee, H.S, Izumi, M, Shah, C, Poole III, F.L, Adams, M.W.W, Richardson, J.S, Richardson, D.C, Wang, B.-C, Southeast Collaboratory for Structural Genomics (SECSG)
Deposit date:2007-04-17
Release date:2007-05-22
Last modified:2024-02-21
Method:X-RAY DIFFRACTION (1.85 Å)
Cite:Structure of the hypothetical protein PF0899 from Pyrococcus furiosus at 1.85 A resolution.
Acta Crystallogr.,Sect.F, 63, 2007

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