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9MU2
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BU of 9mu2 by Molmil
SaPI1 neck structure with DNA, tail completion protein, and tape measure protein
Descriptor: DNA, 3'-5', 5'-3', ...
Authors:Kizziah, J.L, Dokland, T.
Deposit date:2025-01-13
Release date:2025-06-11
Last modified:2025-06-18
Method:ELECTRON MICROSCOPY (3.54 Å)
Cite:Structure of the Staphylococcus aureus bacteriophage 80 alpha neck shows details of the DNA, tail completion protein, and tape measure protein.
Structure, 33, 2025
6V8I
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BU of 6v8i by Molmil
Composite atomic model of the Staphylococcus aureus phage 80alpha baseplate
Descriptor: Distal Tail Protein, gp58, FE (III) ION, ...
Authors:Kizziah, J.L, Dokland, T.
Deposit date:2019-12-11
Release date:2020-03-04
Last modified:2024-03-06
Method:ELECTRON MICROSCOPY (3.7 Å)
Cite:Structure of the host cell recognition and penetration machinery of a Staphylococcus aureus bacteriophage.
Plos Pathog., 16, 2020
9MU3
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BU of 9mu3 by Molmil
SaPI1 neck structure
Descriptor: DUF3168 domain-containing protein, Head-tail connector protein, Major tail protein, ...
Authors:Kizziah, J.L, Dokland, T.
Deposit date:2025-01-13
Release date:2025-05-07
Last modified:2025-06-18
Method:ELECTRON MICROSCOPY (3.14 Å)
Cite:Structure of the Staphylococcus aureus bacteriophage 80 alpha neck shows details of the DNA, tail completion protein, and tape measure protein.
Structure, 33, 2025
6C22
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BU of 6c22 by Molmil
Capsid protein in the Staphylococcus aureus phage 80alpha-derived SaPI1 mature capsid
Descriptor: Major head protein
Authors:Kizziah, J.L, Dearborn, A.D, Dokland, T.
Deposit date:2018-01-05
Release date:2018-01-17
Last modified:2024-03-13
Method:ELECTRON MICROSCOPY (8.4 Å)
Cite:Cleavage and Structural Transitions during Maturation of Staphylococcus aureus Bacteriophage 80 alpha and SaPI1 Capsids.
Viruses, 9, 2017
6C21
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BU of 6c21 by Molmil
Capsid protein in the Staphylococcus aureus phage 80alpha mature capsid
Descriptor: Major head protein
Authors:Kizziah, J.L, Dearborn, A.D, Dokland, T.
Deposit date:2018-01-05
Release date:2018-01-17
Last modified:2024-03-13
Method:ELECTRON MICROSCOPY (5.2 Å)
Cite:Cleavage and Structural Transitions during Maturation of Staphylococcus aureus Bacteriophage 80 alpha and SaPI1 Capsids.
Viruses, 9, 2017
7JW1
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BU of 7jw1 by Molmil
Satellite phage P4 procapsid including size determination (Sid) protein
Descriptor: Major capsid protein gpN, Size determination protein Sid
Authors:Kizziah, J.L, Dokland, T.
Deposit date:2020-08-24
Release date:2020-09-16
Last modified:2025-05-28
Method:ELECTRON MICROSCOPY (4.19 Å)
Cite:Structure of the Capsid Size-Determining Scaffold of "Satellite" Bacteriophage P4.
Viruses, 12, 2020
6B0X
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BU of 6b0x by Molmil
Capsid protein and C-terminal part of scaffolding protein in the Staphylococcus aureus phage 80alpha procapsid
Descriptor: Major head protein, Scaffold protein
Authors:Kizziah, J.L, Dearborn, A.D, Dokland, T.
Deposit date:2017-09-15
Release date:2017-10-18
Last modified:2024-03-13
Method:ELECTRON MICROSCOPY (3.8 Å)
Cite:Competing scaffolding proteins determine capsid size during mobilization ofStaphylococcus aureuspathogenicity islands.
Elife, 6, 2017
6B23
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BU of 6b23 by Molmil
Capsid protein and C-terminal part of CpmB protein in the Staphylococcus aureus pathogenicity island 1 80alpha-derived procapsid
Descriptor: Capsid morphogenesis B protein, Major head protein
Authors:Kizziah, J.L, Dearborn, A.D, Dokland, T.
Deposit date:2017-09-19
Release date:2017-10-18
Last modified:2024-03-13
Method:ELECTRON MICROSCOPY (3.7 Å)
Cite:Competing scaffolding proteins determine capsid size during mobilization ofStaphylococcus aureuspathogenicity islands.
Elife, 6, 2017
8VD8
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BU of 8vd8 by Molmil
SaPI1 portal structure in mature capsids containing DNA
Descriptor: Connector, Portal protein
Authors:Kizziah, J.L, Mukherjee, A, Dokland, T.
Deposit date:2023-12-14
Release date:2024-01-10
Last modified:2024-01-17
Method:ELECTRON MICROSCOPY (3.2 Å)
Cite:Structure of the Portal Complex from Staphylococcus aureus Pathogenicity Island 1 Transducing Particles In Situ and In Isolation.
J.Mol.Biol., 436, 2023
8VDE
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BU of 8vde by Molmil
SaPI1 portal-capsid interface in mature capsids with DNA
Descriptor: Major capsid protein, Portal protein
Authors:Kizziah, J.L, Mukherjee, A, Dokland, T.
Deposit date:2023-12-14
Release date:2024-01-10
Last modified:2024-01-17
Method:ELECTRON MICROSCOPY (3.4 Å)
Cite:Structure of the Portal Complex from Staphylococcus aureus Pathogenicity Island 1 Transducing Particles In Situ and In Isolation.
J.Mol.Biol., 436, 2023
8V8B
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BU of 8v8b by Molmil
Structure of 80alpha portal protein expressed in E. coli
Descriptor: Portal protein
Authors:Kizziah, J.L, Mukherjee, A, Dokland, T.
Deposit date:2023-12-05
Release date:2024-01-10
Last modified:2024-01-17
Method:ELECTRON MICROSCOPY (2.4 Å)
Cite:Structure of the Portal Complex from Staphylococcus aureus Pathogenicity Island 1 Transducing Particles In Situ and In Isolation.
J.Mol.Biol., 436, 2023
8T6M
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BU of 8t6m by Molmil
Human leukocyte antigen bound by two alloreactive antibody Fabs
Descriptor: Beta-2-microglobulin, HLA_A0101_peptide, JTK191b_L02_Fab, ...
Authors:Kizziah, J.L, Killian, J.T, Diaz-Avalos, R, Qiu, S, Yang, G, Green, T, Lund, F.E.
Deposit date:2023-06-16
Release date:2024-12-25
Last modified:2025-07-09
Method:ELECTRON MICROSCOPY (3.14 Å)
Cite:Topography of the HLA-A protein enforces shared and convergent immunodominant B cell and antibody alloresponses in transplant recipients
To Be Published
8EGS
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BU of 8egs by Molmil
Tail knob structure of Staphylococcus phage Andhra
Descriptor: Lower collar protein, Major tail protein
Authors:Kizziah, J.L, Hawkins, N.C, Dokland, T.
Deposit date:2022-09-13
Release date:2022-12-14
Last modified:2025-05-28
Method:ELECTRON MICROSCOPY (3.92 Å)
Cite:Structure and host specificity of Staphylococcus epidermidis bacteriophage Andhra.
Sci Adv, 8, 2022
8EJ5
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BU of 8ej5 by Molmil
Tail tip structure of Staphylococcus phage Andhra
Descriptor: gp1, tail tip protein, gp10, ...
Authors:Kizziah, J.L, Hawkins, N.C, Dokland, T.
Deposit date:2022-09-16
Release date:2022-12-14
Last modified:2024-06-19
Method:ELECTRON MICROSCOPY (4.9 Å)
Cite:Structure and host specificity of Staphylococcus epidermidis bacteriophage Andhra.
Sci Adv, 8, 2022
8EGR
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BU of 8egr by Molmil
Upper tail structure of Staphylococcus phage Andhra
Descriptor: SGNH_hydro domain-containing protein, Upper collar protein, gp15, ...
Authors:Kizziah, J.L, Hawkins, N.C, Dokland, T.
Deposit date:2022-09-13
Release date:2022-12-14
Last modified:2025-05-28
Method:ELECTRON MICROSCOPY (3.58 Å)
Cite:Structure and host specificity of Staphylococcus epidermidis bacteriophage Andhra.
Sci Adv, 8, 2022
7RWZ
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BU of 7rwz by Molmil
SaPIbov5 procapsid structure including size redirecting protein Ccm
Descriptor: Cos capsid morphogenesis protein (Ccm), Major capsid protein
Authors:Hawkins, N.C, Kizziah, J.L, Dokland, T.
Deposit date:2021-08-20
Release date:2021-11-17
Last modified:2025-05-28
Method:ELECTRON MICROSCOPY (4 Å)
Cite:Shape shifter: redirection of prolate phage capsid assembly by staphylococcal pathogenicity islands.
Nat Commun, 12, 2021
8VDC
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BU of 8vdc by Molmil
SaPI1 portal structure in mature capsids without DNA
Descriptor: Connector, Portal protein
Authors:Mukherjee, A, Kizziah, J.L, Dokland, T.
Deposit date:2023-12-14
Release date:2024-01-10
Last modified:2024-01-17
Method:ELECTRON MICROSCOPY (3.5 Å)
Cite:Structure of the Portal Complex from Staphylococcus aureus Pathogenicity Island 1 Transducing Particles In Situ and In Isolation.
J.Mol.Biol., 436, 2023
8VD4
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BU of 8vd4 by Molmil
SaPI1 mature capsid structure containing DNA
Descriptor: Major head protein
Authors:Mukherjee, A, Kizziah, J.L, Dokland, T.
Deposit date:2023-12-14
Release date:2024-01-10
Last modified:2024-01-17
Method:ELECTRON MICROSCOPY (3.1 Å)
Cite:Structure of the Portal Complex from Staphylococcus aureus Pathogenicity Island 1 Transducing Particles In Situ and In Isolation.
J.Mol.Biol., 436, 2023
8VD5
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BU of 8vd5 by Molmil
SaPI1 mature capsid structure without DNA
Descriptor: Major capsid protein
Authors:Mukherjee, A, Kizziah, J.L, Dokland, T.
Deposit date:2023-12-14
Release date:2024-01-10
Last modified:2024-01-17
Method:ELECTRON MICROSCOPY (3.2 Å)
Cite:Structure of the Portal Complex from Staphylococcus aureus Pathogenicity Island 1 Transducing Particles In Situ and In Isolation.
J.Mol.Biol., 436, 2023
5IN9
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BU of 5in9 by Molmil
Crystal structure of Grp94 bound to methyl 3-chloro-2-(2-(1-((5-chlorofuran-2-yl)methyl)-1H-imidazol-2-yl)ethyl)-4,6-dihydroxybenzoate, an inhibitor based on the BnIm and Radamide scaffolds.
Descriptor: Endoplasmin, GLYCEROL, TRIETHYLENE GLYCOL, ...
Authors:Lieberman, R.L, Huard, D.J.E, Kizziah, J.L.
Deposit date:2016-03-07
Release date:2016-05-04
Last modified:2023-09-27
Method:X-RAY DIFFRACTION (2.6 Å)
Cite:Development of Glucose Regulated Protein 94-Selective Inhibitors Based on the BnIm and Radamide Scaffold.
J.Med.Chem., 59, 2016
8EGT
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BU of 8egt by Molmil
Capsid structure of Staphylococcus phage Andhra
Descriptor: Major capsid protein, gp19, capsid lining protein
Authors:Hawkins, N.C, Kizziah, J.L, Dokland, T.
Deposit date:2022-09-13
Release date:2022-12-14
Last modified:2024-06-19
Method:ELECTRON MICROSCOPY (3.5 Å)
Cite:Structure and host specificity of Staphylococcus epidermidis bacteriophage Andhra.
Sci Adv, 8, 2022
4S0Z
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BU of 4s0z by Molmil
Crystal structure of M26V human DJ-1
Descriptor: 1,2-ETHANEDIOL, ACETATE ION, Protein DJ-1
Authors:Milkovic, N.M, Wilson, M.A.
Deposit date:2015-01-07
Release date:2015-08-05
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (1.45 Å)
Cite:Transient sampling of aggregation-prone conformations causes pathogenic instability of a parkinsonian mutant of DJ-1 at physiological temperature.
Protein Sci., 24, 2015
9BLL
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BU of 9bll by Molmil
Cryo-EM of RBD(EG5.1)/1301B7 Fab Complex
Descriptor: 1301B7 Heavy Chain, 1301B7 Light Chain, 2-acetamido-2-deoxy-beta-D-glucopyranose, ...
Authors:Walter, M.R, Green, T.J.
Deposit date:2024-04-30
Release date:2025-03-12
Method:ELECTRON MICROSCOPY (4.1 Å)
Cite:Potent neutralization by a RBD antibody with broad specificity for SARS-CoV-2 JN.1 and other variants.
Npj Viruses, 2, 2024
8T7R
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BU of 8t7r by Molmil
Crystal structure of human leukocyte antigen A*0101 in complex with the Fab of alloreactive antibody E07
Descriptor: Beta-2-microglobulin, Fab heavy chain from antibody JTK191b E07, Light chain from antibody JTK191b E07, ...
Authors:Green, T.J, Killian Jr, J.T, Qiu, S, Macon, K.J, Yang, G, King, R.G, Lund, F.E.
Deposit date:2023-06-21
Release date:2024-12-25
Method:X-RAY DIFFRACTION (3.84 Å)
Cite:B cell and antibody targeting of transplant alloantigen epitopes is supported by both self and allo-recognition
To Be Published

238582

PDB entries from 2025-07-09

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